RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 CFAP44Q96MT7 982 aa19.78■□□□□ 0.76
MCF2L-224ENST00000475524 BTAF1O14981 1849 aa19.77■□□□□ 0.76
MCF2L-224ENST00000475524 THUMPD2Q9BTF0 503 aaKnown RBP19.77■□□□□ 0.76
MCF2L-224ENST00000475524 TMOD3Q9NYL9 352 aa19.77■□□□□ 0.76
MCF2L-224ENST00000475524 SALL2Q9Y467 1007 aaPredicted RBP19.77■□□□□ 0.76
MCF2L-224ENST00000475524 ZNF831Q5JPB2 1677 aa19.76■□□□□ 0.75
MCF2L-224ENST00000475524 E9PSI1 815 aa19.76■□□□□ 0.75
MCF2L-224ENST00000475524 CHL1O00533 1208 aa19.76■□□□□ 0.75
MCF2L-224ENST00000475524 KAT6BQ8WYB5 2073 aa19.75■□□□□ 0.75
MCF2L-224ENST00000475524 NFATC2IPQ8NCF5 419 aa19.75■□□□□ 0.75
MCF2L-224ENST00000475524 MYH16Q9H6N6 1097 aa19.75■□□□□ 0.75
MCF2L-224ENST00000475524 CICQ96RK0 1608 aaPredicted RBP19.75■□□□□ 0.75
MCF2L-224ENST00000475524 RGPD3A6NKT7 1758 aaPredicted RBP19.75■□□□□ 0.75
MCF2L-224ENST00000475524 RGPD4Q7Z3J3 1758 aa19.75■□□□□ 0.75
MCF2L-224ENST00000475524 TNS1Q9HBL0 1735 aaKnown RBP19.74■□□□□ 0.75
MCF2L-224ENST00000475524 PRIM1P49642 420 aaKnown RBP19.74■□□□□ 0.75
MCF2L-224ENST00000475524 BCL11BQ9C0K0 894 aaPredicted RBP19.73■□□□□ 0.75
MCF2L-224ENST00000475524 SENP3-EIF4A1A0A087X0R7 540 aa19.72■□□□□ 0.75
MCF2L-224ENST00000475524 BTBD11A6QL63 1104 aa19.72■□□□□ 0.75
MCF2L-224ENST00000475524 SLFN5Q08AF3 891 aa19.72■□□□□ 0.75
MCF2L-224ENST00000475524 TRMT2AQ8IZ69 625 aaKnown RBP19.72■□□□□ 0.75
MCF2L-224ENST00000475524 PIGBQ92521 554 aa19.72■□□□□ 0.75
MCF2L-224ENST00000475524 LY75O60449 1722 aa19.71■□□□□ 0.75
MCF2L-224ENST00000475524 FAM182BQ5T319 152 aa19.71■□□□□ 0.75
MCF2L-224ENST00000475524 SMARCC1Q92922 1105 aaPredicted RBP19.71■□□□□ 0.75
MCF2L-224ENST00000475524 YTHDC1Q96MU7 727 aaKnown RBP19.71■□□□□ 0.75
MCF2L-224ENST00000475524 TSPYL4Q9UJ04 414 aa19.71■□□□□ 0.75
MCF2L-224ENST00000475524 ZNF790Q6PG37 636 aa19.7■□□□□ 0.74
MCF2L-224ENST00000475524 SYTL4Q96C24 671 aaPredicted RBP19.7■□□□□ 0.74
MCF2L-224ENST00000475524 ACSBG1Q96GR2 724 aa19.7■□□□□ 0.74
MCF2L-224ENST00000475524 KCPQ6ZWJ8 1503 aa19.7■□□□□ 0.74
MCF2L-224ENST00000475524 SOS1Q07889 1333 aaPredicted RBP19.7■□□□□ 0.74
MCF2L-224ENST00000475524 MBIPQ9NS73 344 aa19.69■□□□□ 0.74
MCF2L-224ENST00000475524 FANCIQ9NVI1 1328 aa19.69■□□□□ 0.74
MCF2L-224ENST00000475524 KCNQ2O43526 872 aa19.68■□□□□ 0.74
MCF2L-224ENST00000475524 TTC5Q8N0Z6 440 aa19.68■□□□□ 0.74
MCF2L-224ENST00000475524 HEG1Q9ULI3 1381 aa19.68■□□□□ 0.74
MCF2L-224ENST00000475524 LAMB4A4D0S4 1761 aa19.67■□□□□ 0.74
MCF2L-224ENST00000475524 SPINK5Q9NQ38 1064 aaPredicted RBP19.67■□□□□ 0.74
MCF2L-224ENST00000475524 ATG3Q9NT62 314 aa19.67■□□□□ 0.74
MCF2L-224ENST00000475524 HOXB7P09629 217 aa19.66■□□□□ 0.74
MCF2L-224ENST00000475524 HMGB2P26583 209 aaKnown RBP19.66■□□□□ 0.74
MCF2L-224ENST00000475524 DUSP27Q5VZP5 1158 aa19.66■□□□□ 0.74
MCF2L-224ENST00000475524 CCDC125Q86Z20 511 aa19.66■□□□□ 0.74
MCF2L-224ENST00000475524 LAS1LQ9Y4W2 734 aaKnown RBP19.66■□□□□ 0.74
MCF2L-224ENST00000475524 CT47B1P0C2W7 299 aaPredicted RBP19.65■□□□□ 0.74
MCF2L-224ENST00000475524 EIF4A1P60842 406 aaKnown RBP19.65■□□□□ 0.74
MCF2L-224ENST00000475524 VSIG10Q8N0Z9 540 aa19.65■□□□□ 0.74
MCF2L-224ENST00000475524 CDCA7LQ96GN5 454 aa19.65■□□□□ 0.74
MCF2L-224ENST00000475524 FMNL2Q96PY5 1086 aa19.65■□□□□ 0.74
MCF2L-224ENST00000475524 PALLDQ8WX93 1383 aa19.65■□□□□ 0.74
MCF2L-224ENST00000475524 TRIM37O94972 964 aa19.64■□□□□ 0.73
MCF2L-224ENST00000475524 CHMP4AQ9BY43 222 aa19.64■□□□□ 0.73
MCF2L-224ENST00000475524 ASAP1Q9ULH1 1129 aa19.64■□□□□ 0.73
MCF2L-224ENST00000475524 TJP1Q07157 1748 aa19.63■□□□□ 0.73
MCF2L-224ENST00000475524 PLSCR1O15162 318 aa19.63■□□□□ 0.73
MCF2L-224ENST00000475524 SLC39A6Q13433 755 aa19.63■□□□□ 0.73
MCF2L-224ENST00000475524 TSR2Q969E8 191 aaKnown RBP19.63■□□□□ 0.73
MCF2L-224ENST00000475524 MIS18AQ9NYP9 233 aa19.63■□□□□ 0.73
MCF2L-224ENST00000475524 C5P01031 1676 aa19.62■□□□□ 0.73
MCF2L-224ENST00000475524 ZNF428Q96B54 188 aa19.62■□□□□ 0.73
MCF2L-224ENST00000475524 ZNF496Q96IT1 587 aaPredicted RBP19.62■□□□□ 0.73
MCF2L-224ENST00000475524 COL5A3P25940 1745 aaPredicted RBP19.62■□□□□ 0.73
MCF2L-224ENST00000475524 TEX13AQ9BXU3 409 aaPredicted RBP19.61■□□□□ 0.73
MCF2L-224ENST00000475524 CACNA1FO60840 1977 aa19.61■□□□□ 0.73
MCF2L-224ENST00000475524 TAF1LQ8IZX4 1826 aa19.6■□□□□ 0.73
MCF2L-224ENST00000475524 KCNQ3O43525 872 aa19.6■□□□□ 0.73
MCF2L-224ENST00000475524 SNRPA1P09661 255 aaKnown RBP19.6■□□□□ 0.73
MCF2L-224ENST00000475524 PTF1AQ7RTS3 328 aa19.6■□□□□ 0.73
MCF2L-224ENST00000475524 LOC102724428A0A0B4J2F2 783 aa19.59■□□□□ 0.73
MCF2L-224ENST00000475524 GIGYF1O75420 1035 aaPredicted RBP19.59■□□□□ 0.73
MCF2L-224ENST00000475524 SIK1P57059 783 aa19.59■□□□□ 0.73
MCF2L-224ENST00000475524 RREB1Q92766 1687 aa19.59■□□□□ 0.73
MCF2L-224ENST00000475524 EXOSC9Q06265 439 aaKnown RBP19.58■□□□□ 0.72
MCF2L-224ENST00000475524 SF3B2Q13435 895 aaKnown RBP19.58■□□□□ 0.72
MCF2L-224ENST00000475524 SLC27A3Q5K4L6 730 aa19.58■□□□□ 0.72
MCF2L-224ENST00000475524 TWISTNBQ3B726 338 aaPredicted RBP19.57■□□□□ 0.72
MCF2L-224ENST00000475524 EP400Q96L91 3159 aa19.56■□□□□ 0.72
MCF2L-224ENST00000475524 ERBB4Q15303 1308 aa19.56■□□□□ 0.72
MCF2L-224ENST00000475524 PTCD1O75127 700 aaKnown RBP19.56■□□□□ 0.72
MCF2L-224ENST00000475524 APBA3O96018 575 aa19.56■□□□□ 0.72
MCF2L-224ENST00000475524 C8orf58Q8NAV2 365 aa19.56■□□□□ 0.72
MCF2L-224ENST00000475524 BAG6P46379 1132 aa19.55■□□□□ 0.72
MCF2L-224ENST00000475524 RBM42Q9BTD8 480 aaKnown RBP19.55■□□□□ 0.72
MCF2L-224ENST00000475524 VAMP4O75379 141 aa19.54■□□□□ 0.72
MCF2L-224ENST00000475524 SLC4A9Q96Q91 983 aa19.54■□□□□ 0.72
MCF2L-224ENST00000475524 STARD3NLO95772 234 aa19.53■□□□□ 0.72
MCF2L-224ENST00000475524 ATP6V1AP38606 617 aa19.53■□□□□ 0.72
MCF2L-224ENST00000475524 TSPYL6Q8N831 410 aa19.53■□□□□ 0.72
MCF2L-224ENST00000475524 CCNL1Q9UK58 526 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-224ENST00000475524 C4BP0C0L5 1744 aa19.52■□□□□ 0.72
MCF2L-224ENST00000475524 KRT24Q2M2I5 525 aa19.52■□□□□ 0.72
MCF2L-224ENST00000475524 TXNRD1Q16881 649 aa19.51■□□□□ 0.71
MCF2L-224ENST00000475524 ALDH1L2Q3SY69 923 aa19.51■□□□□ 0.71
MCF2L-224ENST00000475524 CCDC30Q5VVM6 783 aa19.51■□□□□ 0.71
MCF2L-224ENST00000475524 CNTNAP4Q9C0A0 1308 aa19.51■□□□□ 0.71
MCF2L-224ENST00000475524 RC3H1Q5TC82 1133 aaKnown RBP19.5■□□□□ 0.71
MCF2L-224ENST00000475524 HDGFL1Q5TGJ6 251 aa19.5■□□□□ 0.71
MCF2L-224ENST00000475524 DNAJC10Q8IXB1 793 aa19.5■□□□□ 0.71
MCF2L-224ENST00000475524 UPF1Q92900 1129 aaKnown RBP eCLIP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms