RNA–Protein interactions for RNA: ENST00000475432.6

HIF3A-207, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-207ENST00000475432 IPO8O15397 1037 aaKnown RBP23.12■■□□□ 1.29
HIF3A-207ENST00000475432 RLBP1P12271 317 aa23.12■■□□□ 1.29
HIF3A-207ENST00000475432 EIF4A1P60842 406 aaKnown RBP23.12■■□□□ 1.29
HIF3A-207ENST00000475432 ATF7IPQ6VMQ6 1270 aa23.12■■□□□ 1.29
HIF3A-207ENST00000475432 CLUAP1Q96AJ1 413 aa23.12■■□□□ 1.29
HIF3A-207ENST00000475432 SOS1Q07889 1333 aaPredicted RBP23.11■■□□□ 1.29
HIF3A-207ENST00000475432 SPATA31A1Q5TZJ5 1347 aa23.11■■□□□ 1.29
HIF3A-207ENST00000475432 KCNQ3O43525 872 aa23.11■■□□□ 1.29
HIF3A-207ENST00000475432 DDX54Q8TDD1 881 aaKnown RBP23.11■■□□□ 1.29
HIF3A-207ENST00000475432 C8orf37Q96NL8 207 aa23.11■■□□□ 1.29
HIF3A-207ENST00000475432 NKX1-1Q15270 411 aaPredicted RBP23.11■■□□□ 1.29
HIF3A-207ENST00000475432 NFATC2IPQ8NCF5 419 aa23.11■■□□□ 1.29
HIF3A-207ENST00000475432 DZIP1LQ8IYY4 767 aaKnown RBP23.1■■□□□ 1.29
HIF3A-207ENST00000475432 NGLY1Q96IV0 654 aa23.1■■□□□ 1.29
HIF3A-207ENST00000475432 COG6Q9Y2V7 657 aa23.1■■□□□ 1.29
HIF3A-207ENST00000475432 MRC1P22897 1456 aa23.1■■□□□ 1.29
HIF3A-207ENST00000475432 NWD2Q9ULI1 1742 aa23.1■■□□□ 1.29
HIF3A-207ENST00000475432 LRP6O75581 1613 aa23.1■■□□□ 1.29
HIF3A-207ENST00000475432 MS4A1P11836 297 aa23.09■■□□□ 1.29
HIF3A-207ENST00000475432 KDM3BQ7LBC6 1761 aa23.09■■□□□ 1.29
HIF3A-207ENST00000475432 SCN11AQ9UI33 1791 aa23.09■■□□□ 1.29
HIF3A-207ENST00000475432 UNC5CLQ8IV45 518 aa23.09■■□□□ 1.29
HIF3A-207ENST00000475432 FTSJ3Q8IY81 847 aaKnown RBP23.09■■□□□ 1.29
HIF3A-207ENST00000475432 CCDC136Q96JN2 1154 aa23.09■■□□□ 1.29
HIF3A-207ENST00000475432 THRAP3Q9Y2W1 955 aaKnown RBP23.09■■□□□ 1.29
HIF3A-207ENST00000475432 SPATA31A5Q5VU36 1347 aa23.08■■□□□ 1.29
HIF3A-207ENST00000475432 SPATA31A7Q8IWB4 1347 aa23.08■■□□□ 1.29
HIF3A-207ENST00000475432 ARHGAP45Q92619 1136 aa23.08■■□□□ 1.29
HIF3A-207ENST00000475432 VIRMAQ69YN4 1812 aaKnown RBP23.08■■□□□ 1.28
HIF3A-207ENST00000475432 SIPA1L3O60292 1781 aaPredicted RBP23.07■■□□□ 1.28
HIF3A-207ENST00000475432 SHANK3Q9BYB0 1731 aa23.07■■□□□ 1.28
HIF3A-207ENST00000475432 BCL9LQ86UU0 1499 aa23.07■■□□□ 1.28
HIF3A-207ENST00000475432 CABP4P57796 275 aa23.06■■□□□ 1.28
HIF3A-207ENST00000475432 CDCA7Q9BWT1 371 aaPredicted RBP23.06■■□□□ 1.28
HIF3A-207ENST00000475432 FNBP4Q8N3X1 1017 aaPredicted RBP23.06■■□□□ 1.28
HIF3A-207ENST00000475432 SLC4A2P04920 1241 aa23.05■■□□□ 1.28
HIF3A-207ENST00000475432 HOXB7P09629 217 aa23.05■■□□□ 1.28
HIF3A-207ENST00000475432 CCDC30Q5VVM6 783 aa23.05■■□□□ 1.28
HIF3A-207ENST00000475432 ZNF790Q6PG37 636 aa23.05■■□□□ 1.28
HIF3A-207ENST00000475432 CCDC9Q9Y3X0 531 aaKnown RBP23.05■■□□□ 1.28
HIF3A-207ENST00000475432 ERVV-2B6SEH9 535 aa23.04■■□□□ 1.28
HIF3A-207ENST00000475432 HEG1Q9ULI3 1381 aa23.04■■□□□ 1.28
HIF3A-207ENST00000475432 EXOC5O00471 708 aa23.04■■□□□ 1.28
HIF3A-207ENST00000475432 SLC39A6Q13433 755 aa23.04■■□□□ 1.28
HIF3A-207ENST00000475432 MVPQ14764 893 aaKnown RBP23.03■■□□□ 1.28
HIF3A-207ENST00000475432 STK31Q9BXU1 1019 aa23.03■■□□□ 1.28
HIF3A-207ENST00000475432 HDGFL1Q5TGJ6 251 aa23.03■■□□□ 1.28
HIF3A-207ENST00000475432 VPS72Q15906 364 aa23.02■■□□□ 1.28
HIF3A-207ENST00000475432 BARGINQ6ZT62 677 aa23.02■■□□□ 1.28
HIF3A-207ENST00000475432 NECTIN2Q92692 538 aa23.02■■□□□ 1.28
HIF3A-207ENST00000475432 GIGYF1O75420 1035 aaPredicted RBP23.01■■□□□ 1.27
HIF3A-207ENST00000475432 TNS2Q63HR2 1409 aa23.01■■□□□ 1.27
HIF3A-207ENST00000475432 API5Q9BZZ5 524 aaKnown RBP23.01■■□□□ 1.27
HIF3A-207ENST00000475432 TMEM57Q8N5G2 664 aa23.01■■□□□ 1.27
HIF3A-207ENST00000475432 MEX3CQ5U5Q3 659 aaKnown RBP23■■□□□ 1.27
HIF3A-207ENST00000475432 WNK3Q9BYP7 1800 aa23■■□□□ 1.27
HIF3A-207ENST00000475432 ITPRIPQ8IWB1 547 aa22.99■■□□□ 1.27
HIF3A-207ENST00000475432 TTC5Q8N0Z6 440 aa22.99■■□□□ 1.27
HIF3A-207ENST00000475432 CHMP4AQ9BY43 222 aa22.99■■□□□ 1.27
HIF3A-207ENST00000475432 USP21Q9UK80 565 aa22.99■■□□□ 1.27
HIF3A-207ENST00000475432 PTPRCP08575 1304 aa22.99■■□□□ 1.27
HIF3A-207ENST00000475432 EIF2S2P20042 333 aaKnown RBP22.99■■□□□ 1.27
HIF3A-207ENST00000475432 ABCC4O15439 1325 aa22.99■■□□□ 1.27
HIF3A-207ENST00000475432 DDB1Q16531 1140 aa22.98■■□□□ 1.27
HIF3A-207ENST00000475432 AAMPQ13685 434 aa22.98■■□□□ 1.27
HIF3A-207ENST00000475432 G2E3Q7L622 706 aa22.98■■□□□ 1.27
HIF3A-207ENST00000475432 ZNF496Q96IT1 587 aaPredicted RBP22.98■■□□□ 1.27
HIF3A-207ENST00000475432 DDX19BQ9UMR2 479 aa22.97■■□□□ 1.27
HIF3A-207ENST00000475432 RGS12O14924 1447 aa22.97■■□□□ 1.27
HIF3A-207ENST00000475432 PRAMEF22A3QJZ6 481 aa22.96■■□□□ 1.27
HIF3A-207ENST00000475432 FLIIQ13045 1269 aa22.94■■□□□ 1.26
HIF3A-207ENST00000475432 FAM98CQ17RN3 349 aaKnown RBP22.94■■□□□ 1.26
HIF3A-207ENST00000475432 FMNL2Q96PY5 1086 aa22.94■■□□□ 1.26
HIF3A-207ENST00000475432 TMOD3Q9NYL9 352 aa22.94■■□□□ 1.26
HIF3A-207ENST00000475432 TOGARAM1Q9Y4F4 1720 aa22.94■■□□□ 1.26
HIF3A-207ENST00000475432 CHPF2Q9P2E5 772 aa22.94■■□□□ 1.26
HIF3A-207ENST00000475432 AFF2P51816 1311 aa22.92■■□□□ 1.26
HIF3A-207ENST00000475432 SNRPA1P09661 255 aaKnown RBP22.92■■□□□ 1.26
HIF3A-207ENST00000475432 PIGBQ92521 554 aa22.91■■□□□ 1.26
HIF3A-207ENST00000475432 DBF4Q9UBU7 674 aaPredicted RBP22.91■■□□□ 1.26
HIF3A-207ENST00000475432 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.91■■□□□ 1.26
HIF3A-207ENST00000475432 FKBP5Q13451 457 aaPredicted RBP22.91■■□□□ 1.26
HIF3A-207ENST00000475432 MARCH10Q8NA82 808 aaPredicted RBP22.91■■□□□ 1.26
HIF3A-207ENST00000475432 PHAXQ9H814 394 aaKnown RBP22.91■■□□□ 1.26
HIF3A-207ENST00000475432 INTS3Q68E01 1043 aaKnown RBP22.9■■□□□ 1.26
HIF3A-207ENST00000475432 ZBTB40Q9NUA8 1239 aa22.89■■□□□ 1.26
HIF3A-207ENST00000475432 F6X3S4 739 aa22.88■■□□□ 1.25
HIF3A-207ENST00000475432 ZBTB7BO15156 539 aaPredicted RBP22.88■■□□□ 1.25
HIF3A-207ENST00000475432 BCL9O00512 1426 aa22.88■■□□□ 1.25
HIF3A-207ENST00000475432 ANXA1P04083 346 aa22.87■■□□□ 1.25
HIF3A-207ENST00000475432 PCDHB15Q9Y5E8 787 aa22.87■■□□□ 1.25
HIF3A-207ENST00000475432 PAPPAQ13219 1627 aa22.87■■□□□ 1.25
HIF3A-207ENST00000475432 KCPQ6ZWJ8 1503 aa22.87■■□□□ 1.25
HIF3A-207ENST00000475432 KDM2BQ8NHM5 1336 aa22.87■■□□□ 1.25
HIF3A-207ENST00000475432 GLI3P10071 1580 aa22.87■■□□□ 1.25
HIF3A-207ENST00000475432 PROSER3Q2NL68 480 aa22.87■■□□□ 1.25
HIF3A-207ENST00000475432 PELP1Q8IZL8 1130 aaKnown RBP22.87■■□□□ 1.25
HIF3A-207ENST00000475432 USP16Q9Y5T5 823 aa22.87■■□□□ 1.25
HIF3A-207ENST00000475432 PTCD1O75127 700 aaKnown RBP22.86■■□□□ 1.25
HIF3A-207ENST00000475432 GJD4Q96KN9 370 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms