RNA–Protein interactions for RNA: ENST00000475427.2

PDE6C-202, Transcript of phosphodiesterase 6C, humanhuman

TSL 2

Gene PDE6C, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-202ENST00000475427 ZNF837Q96EG3 531 aaPredicted RBP8.97□□□□□ -0.97
PDE6C-202ENST00000475427 LZTS3O60299 673 aaPredicted RBP8.96□□□□□ -0.98
PDE6C-202ENST00000475427 INHAP05111 366 aa8.96□□□□□ -0.98
PDE6C-202ENST00000475427 PHKA2P46019 1235 aa8.96□□□□□ -0.98
PDE6C-202ENST00000475427 TLR1Q15399 786 aa8.96□□□□□ -0.98
PDE6C-202ENST00000475427 EML3Q32P44 896 aa8.96□□□□□ -0.98
PDE6C-202ENST00000475427 GNASQ5JWF2 1037 aa8.96□□□□□ -0.98
PDE6C-202ENST00000475427 H7C1W4 665 aa8.95□□□□□ -0.98
PDE6C-202ENST00000475427 F11P03951 625 aa8.95□□□□□ -0.98
PDE6C-202ENST00000475427 C4orf17Q53FE4 359 aa8.95□□□□□ -0.98
PDE6C-202ENST00000475427 HDGFL1Q5TGJ6 251 aa8.95□□□□□ -0.98
PDE6C-202ENST00000475427 PCDHGA11Q9Y5H2 935 aa8.95□□□□□ -0.98
PDE6C-202ENST00000475427 NCOA4Q13772 614 aa8.94□□□□□ -0.98
PDE6C-202ENST00000475427 PPARGC1BQ86YN6 1023 aaKnown RBP8.94□□□□□ -0.98
PDE6C-202ENST00000475427 NOD1Q9Y239 953 aa8.94□□□□□ -0.98
PDE6C-202ENST00000475427 TMEM229AB2RXF0 380 aa8.93□□□□□ -0.98
PDE6C-202ENST00000475427 FOXR1Q6PIV2 292 aa8.93□□□□□ -0.98
PDE6C-202ENST00000475427 FNBP4Q8N3X1 1017 aaPredicted RBP8.93□□□□□ -0.98
PDE6C-202ENST00000475427 RHBDD1Q8TEB9 315 aa8.93□□□□□ -0.98
PDE6C-202ENST00000475427 A0A1B0GTH6 734 aa8.92□□□□□ -0.98
PDE6C-202ENST00000475427 USP17L5A8MUK1 530 aa8.92□□□□□ -0.98
PDE6C-202ENST00000475427 GPR25O00155 361 aa8.92□□□□□ -0.98
PDE6C-202ENST00000475427 SMTNP53814 917 aa8.92□□□□□ -0.98
PDE6C-202ENST00000475427 GAS6Q14393 721 aa8.92□□□□□ -0.98
PDE6C-202ENST00000475427 PROSER2Q86WR7 435 aaPredicted RBP8.92□□□□□ -0.98
PDE6C-202ENST00000475427 DEPDC4Q8N2C3 294 aa8.92□□□□□ -0.98
PDE6C-202ENST00000475427 GTPBP3Q969Y2 492 aaKnown RBP8.92□□□□□ -0.98
PDE6C-202ENST00000475427 GPAMQ9HCL2 828 aa8.92□□□□□ -0.98
PDE6C-202ENST00000475427 SERTAD1Q9UHV2 236 aa8.92□□□□□ -0.98
PDE6C-202ENST00000475427 SLURP2P0DP57 97 aa8.91□□□□□ -0.98
PDE6C-202ENST00000475427 GTF2IP78347 998 aa8.91□□□□□ -0.98
PDE6C-202ENST00000475427 SLC4A9Q96Q91 983 aa8.91□□□□□ -0.98
PDE6C-202ENST00000475427 UCN2Q96RP3 112 aa8.91□□□□□ -0.98
PDE6C-202ENST00000475427 NUCKS1Q9H1E3 243 aaKnown RBP8.91□□□□□ -0.98
PDE6C-202ENST00000475427 TBC1D9Q6ZT07 1266 aa8.9□□□□□ -0.98
PDE6C-202ENST00000475427 ADAMTS2O95450 1211 aa8.89□□□□□ -0.99
PDE6C-202ENST00000475427 MSX1P28360 303 aa8.89□□□□□ -0.99
PDE6C-202ENST00000475427 SRSF11Q05519 484 aaKnown RBP8.89□□□□□ -0.99
PDE6C-202ENST00000475427 ZNF385CQ66K41 422 aaPredicted RBP8.89□□□□□ -0.99
PDE6C-202ENST00000475427 TRERF1Q96PN7 1200 aa8.89□□□□□ -0.99
PDE6C-202ENST00000475427 A6NJR5 290 aa8.88□□□□□ -0.99
PDE6C-202ENST00000475427 A6NJY4 79 aa8.88□□□□□ -0.99
PDE6C-202ENST00000475427 ATP9BO43861 1147 aa8.88□□□□□ -0.99
PDE6C-202ENST00000475427 THBS1P07996 1170 aa8.88□□□□□ -0.99
PDE6C-202ENST00000475427 PSME1Q06323 249 aa8.88□□□□□ -0.99
PDE6C-202ENST00000475427 MTFR1Q15390 333 aa8.88□□□□□ -0.99
PDE6C-202ENST00000475427 PLEKHM2Q8IWE5 1019 aa8.88□□□□□ -0.99
PDE6C-202ENST00000475427 WHAMMQ8TF30 809 aa8.88□□□□□ -0.99
PDE6C-202ENST00000475427 NIFKQ9BYG3 293 aaKnown RBP8.88□□□□□ -0.99
PDE6C-202ENST00000475427 MBIPQ9NS73 344 aa8.88□□□□□ -0.99
PDE6C-202ENST00000475427 USP17L3A6NCW0 530 aa8.87□□□□□ -0.99
PDE6C-202ENST00000475427 USP17L4A6NCW7 530 aa8.87□□□□□ -0.99
PDE6C-202ENST00000475427 CDK2AP1O14519 115 aa8.87□□□□□ -0.99
PDE6C-202ENST00000475427 BACH1O14867 736 aa8.87□□□□□ -0.99
PDE6C-202ENST00000475427 PLA2G4AP47712 749 aa8.87□□□□□ -0.99
PDE6C-202ENST00000475427 USP17L2Q6R6M4 530 aa8.87□□□□□ -0.99
PDE6C-202ENST00000475427 USP17L1Q7RTZ2 530 aa8.87□□□□□ -0.99
PDE6C-202ENST00000475427 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.87□□□□□ -0.99
PDE6C-202ENST00000475427 GLMNQ92990 594 aa8.87□□□□□ -0.99
PDE6C-202ENST00000475427 RUBCNLQ9H714 662 aa8.87□□□□□ -0.99
PDE6C-202ENST00000475427 CSB-PGBD3P0DP91 1061 aa8.86□□□□□ -0.99
PDE6C-202ENST00000475427 LBRQ14739 615 aaKnown RBP8.86□□□□□ -0.99
PDE6C-202ENST00000475427 TRIM50Q86XT4 487 aa8.86□□□□□ -0.99
PDE6C-202ENST00000475427 PGBD3Q8N328 593 aa8.86□□□□□ -0.99
PDE6C-202ENST00000475427 SVOPQ8N4V2 548 aa8.86□□□□□ -0.99
PDE6C-202ENST00000475427 ZNF358Q9NW07 568 aa8.86□□□□□ -0.99
PDE6C-202ENST00000475427 IQSEC3Q9UPP2 1182 aaPredicted RBP8.86□□□□□ -0.99
PDE6C-202ENST00000475427 ZBTB7BO15156 539 aaPredicted RBP8.85□□□□□ -0.99
PDE6C-202ENST00000475427 ZNF295-AS1Q8N0V1 137 aa8.85□□□□□ -0.99
PDE6C-202ENST00000475427 AIDAQ96BJ3 306 aa8.85□□□□□ -0.99
PDE6C-202ENST00000475427 USP3Q9Y6I4 520 aa8.85□□□□□ -0.99
PDE6C-202ENST00000475427 IGF1RP08069 1367 aa8.85□□□□□ -0.99
PDE6C-202ENST00000475427 ATP1A2P50993 1020 aa8.84□□□□□ -0.99
PDE6C-202ENST00000475427 UBAP2LQ14157 1087 aaKnown RBP8.84□□□□□ -0.99
PDE6C-202ENST00000475427 EFHC2Q5JST6 749 aa8.84□□□□□ -0.99
PDE6C-202ENST00000475427 LYPD4Q6UWN0 246 aa8.84□□□□□ -0.99
PDE6C-202ENST00000475427 CFHR5Q9BXR6 569 aa8.84□□□□□ -0.99
PDE6C-202ENST00000475427 CRISPLD1Q9H336 500 aa8.84□□□□□ -0.99
PDE6C-202ENST00000475427 CABP1Q9NZU7 370 aa8.84□□□□□ -0.99
PDE6C-202ENST00000475427 ADAMTS8Q9UP79 889 aa8.84□□□□□ -0.99
PDE6C-202ENST00000475427 ARHGEF15O94989 841 aa8.83□□□□□ -1
PDE6C-202ENST00000475427 MX2P20592 715 aa8.83□□□□□ -1
PDE6C-202ENST00000475427 CLDN10P78369 228 aa8.83□□□□□ -1
PDE6C-202ENST00000475427 TFIP11Q9UBB9 837 aaKnown RBP8.83□□□□□ -1
PDE6C-202ENST00000475427 MKRN1Q9UHC7 482 aaKnown RBP8.83□□□□□ -1
PDE6C-202ENST00000475427 KIAA1024Q9UPX6 916 aa8.83□□□□□ -1
PDE6C-202ENST00000475427 CELA2BP08218 269 aaPredicted RBP8.82□□□□□ -1
PDE6C-202ENST00000475427 CCDC102BQ68D86 513 aa8.82□□□□□ -1
PDE6C-202ENST00000475427 OGFOD1Q8N543 542 aa8.82□□□□□ -1
PDE6C-202ENST00000475427 TPCN2Q8NHX9 752 aa8.82□□□□□ -1
PDE6C-202ENST00000475427 C1orf216Q8TAB5 229 aa8.82□□□□□ -1
PDE6C-202ENST00000475427 CALR3Q96L12 384 aaKnown RBP8.82□□□□□ -1
PDE6C-202ENST00000475427 DNAAF2Q9NVR5 837 aaKnown RBP8.82□□□□□ -1
PDE6C-202ENST00000475427 SCHIP1Q9P0W5 487 aaPredicted RBP8.82□□□□□ -1
PDE6C-202ENST00000475427 PHF24Q9UPV7 400 aa8.82□□□□□ -1
PDE6C-202ENST00000475427 ATP4AP20648 1035 aa8.81□□□□□ -1
PDE6C-202ENST00000475427 NSFL1CQ9UNZ2 370 aaKnown RBP8.81□□□□□ -1
PDE6C-202ENST00000475427 EPHA4P54764 986 aa8.8□□□□□ -1
PDE6C-202ENST00000475427 NBPF1Q3BBV0 1214 aa8.8□□□□□ -1
PDE6C-202ENST00000475427 TNS4Q8IZW8 715 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms