RNA–Protein interactions for RNA: ENST00000475335.5

SIKE1-208, Transcript of suppressor of IKBKE 1, humanhuman

TSL 2

Gene SIKE1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-208ENST00000475335 LGR6Q9HBX8 967 aa28.19■■■□□ 2.1
SIKE1-208ENST00000475335 TFCP2L1Q9NZI6 479 aa28.19■■■□□ 2.1
SIKE1-208ENST00000475335 NUDCQ9Y266 331 aa28.19■■■□□ 2.1
SIKE1-208ENST00000475335 RNMTO43148 476 aaKnown RBP28.18■■■□□ 2.1
SIKE1-208ENST00000475335 PRKAR2BP31323 418 aa28.18■■■□□ 2.1
SIKE1-208ENST00000475335 PHACTR3Q96KR7 559 aa28.18■■■□□ 2.1
SIKE1-208ENST00000475335 MTFR1LQ9H019 292 aa28.18■■■□□ 2.1
SIKE1-208ENST00000475335 RALBP1Q15311 655 aa28.17■■■□□ 2.1
SIKE1-208ENST00000475335 NFATC2IPQ8NCF5 419 aa28.17■■■□□ 2.1
SIKE1-208ENST00000475335 LINC00116Q8NCU8 138 aa28.17■■■□□ 2.1
SIKE1-208ENST00000475335 MAP3K5Q99683 1374 aa28.16■■■□□ 2.1
SIKE1-208ENST00000475335 COL24A1Q17RW2 1714 aa28.16■■■□□ 2.1
SIKE1-208ENST00000475335 U2AF1L5P0DN76 240 aaPredicted RBP28.16■■■□□ 2.1
SIKE1-208ENST00000475335 U2AF1Q01081 240 aaKnown RBP eCLIP28.16■■■□□ 2.1
SIKE1-208ENST00000475335 AMIGO3Q86WK7 504 aa28.16■■■□□ 2.1
SIKE1-208ENST00000475335 SLC52A2Q9HAB3 445 aa28.16■■■□□ 2.1
SIKE1-208ENST00000475335 ATF5Q9Y2D1 282 aaPredicted RBP28.15■■■□□ 2.1
SIKE1-208ENST00000475335 GAS2L2Q8NHY3 880 aa28.14■■■□□ 2.1
SIKE1-208ENST00000475335 CICQ96RK0 1608 aaPredicted RBP28.14■■■□□ 2.09
SIKE1-208ENST00000475335 VIRMAQ69YN4 1812 aaKnown RBP28.13■■■□□ 2.09
SIKE1-208ENST00000475335 FCHSD2O94868 740 aa28.12■■■□□ 2.09
SIKE1-208ENST00000475335 COL23A1Q86Y22 540 aaPredicted RBP28.12■■■□□ 2.09
SIKE1-208ENST00000475335 UBR3Q6ZT12 1888 aa28.12■■■□□ 2.09
SIKE1-208ENST00000475335 COL5A3P25940 1745 aaPredicted RBP28.12■■■□□ 2.09
SIKE1-208ENST00000475335 HMGB2P26583 209 aaKnown RBP28.11■■■□□ 2.09
SIKE1-208ENST00000475335 ATP6V1AP38606 617 aa28.11■■■□□ 2.09
SIKE1-208ENST00000475335 SLC16A10Q8TF71 515 aa28.11■■■□□ 2.09
SIKE1-208ENST00000475335 KCPQ6ZWJ8 1503 aa28.1■■■□□ 2.09
SIKE1-208ENST00000475335 CEMIPQ8WUJ3 1361 aa28.1■■■□□ 2.09
SIKE1-208ENST00000475335 GNAT3A8MTJ3 354 aa28.09■■■□□ 2.09
SIKE1-208ENST00000475335 IL17REQ8NFR9 667 aa28.09■■■□□ 2.09
SIKE1-208ENST00000475335 MYBBP1AQ9BQG0 1328 aaKnown RBP28.09■■■□□ 2.09
SIKE1-208ENST00000475335 TJP1Q07157 1748 aa28.09■■■□□ 2.09
SIKE1-208ENST00000475335 AK7Q96M32 723 aa28.08■■■□□ 2.09
SIKE1-208ENST00000475335 SIPA1L3O60292 1781 aaPredicted RBP28.07■■■□□ 2.08
SIKE1-208ENST00000475335 RBM42Q9BTD8 480 aaKnown RBP28.07■■■□□ 2.08
SIKE1-208ENST00000475335 SMIM5Q71RC9 77 aa28.06■■■□□ 2.08
SIKE1-208ENST00000475335 PPP1R1BQ9UD71 204 aaPredicted RBP28.06■■■□□ 2.08
SIKE1-208ENST00000475335 PTCD1O75127 700 aaKnown RBP28.05■■■□□ 2.08
SIKE1-208ENST00000475335 UBR2Q8IWV8 1755 aa28.04■■■□□ 2.08
SIKE1-208ENST00000475335 FLAD1Q8NFF5 587 aa28.04■■■□□ 2.08
SIKE1-208ENST00000475335 PLEKHF1Q96S99 279 aa28.04■■■□□ 2.08
SIKE1-208ENST00000475335 CNTNAP4Q9C0A0 1308 aa28.03■■■□□ 2.08
SIKE1-208ENST00000475335 SLC39A6Q13433 755 aa28.03■■■□□ 2.08
SIKE1-208ENST00000475335 PRKRIP1Q9H875 184 aaPredicted RBP28.03■■■□□ 2.08
SIKE1-208ENST00000475335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.02■■■□□ 2.08
SIKE1-208ENST00000475335 GNPATO15228 680 aa28.02■■■□□ 2.08
SIKE1-208ENST00000475335 SSFA2P28290 1259 aa28.02■■■□□ 2.08
SIKE1-208ENST00000475335 RC3H1Q5TC82 1133 aaKnown RBP28.01■■■□□ 2.07
SIKE1-208ENST00000475335 PHF14O94880 888 aa28■■■□□ 2.07
SIKE1-208ENST00000475335 MYH14Q7Z406 1995 aaKnown RBP27.99■■■□□ 2.07
SIKE1-208ENST00000475335 ARXQ96QS3 562 aa27.99■■■□□ 2.07
SIKE1-208ENST00000475335 MSH5O43196 834 aa27.98■■■□□ 2.07
SIKE1-208ENST00000475335 ZNF316A6NFI3 1004 aaPredicted RBP27.97■■■□□ 2.07
SIKE1-208ENST00000475335 TEFQ10587 303 aa27.97■■■□□ 2.07
SIKE1-208ENST00000475335 MSL1Q68DK7 614 aa27.97■■■□□ 2.07
SIKE1-208ENST00000475335 FHDC1Q9C0D6 1143 aaPredicted RBP27.96■■■□□ 2.07
SIKE1-208ENST00000475335 CRKLP46109 303 aaKnown RBP27.95■■■□□ 2.06
SIKE1-208ENST00000475335 DNAJC10Q8IXB1 793 aa27.95■■■□□ 2.06
SIKE1-208ENST00000475335 HTATSF1O43719 755 aaKnown RBP27.94■■■□□ 2.06
SIKE1-208ENST00000475335 MCM10Q7L590 875 aa27.94■■■□□ 2.06
SIKE1-208ENST00000475335 RPS6KA4O75676 772 aa27.93■■■□□ 2.06
SIKE1-208ENST00000475335 POLD1P28340 1107 aa27.93■■■□□ 2.06
SIKE1-208ENST00000475335 INTS5Q6P9B9 1019 aaKnown RBP27.93■■■□□ 2.06
SIKE1-208ENST00000475335 ZNF790Q6PG37 636 aa27.93■■■□□ 2.06
SIKE1-208ENST00000475335 VSIG10Q8N0Z9 540 aa27.93■■■□□ 2.06
SIKE1-208ENST00000475335 RTCBQ9Y3I0 505 aaKnown RBP27.93■■■□□ 2.06
SIKE1-208ENST00000475335 DCTN1Q14203 1278 aa27.92■■■□□ 2.06
SIKE1-208ENST00000475335 SYT17Q9BSW7 474 aa27.92■■■□□ 2.06
SIKE1-208ENST00000475335 C4AP0C0L4 1744 aa27.92■■■□□ 2.06
SIKE1-208ENST00000475335 CYP19A1P11511 503 aaPredicted RBP27.91■■■□□ 2.06
SIKE1-208ENST00000475335 ADRA2BP18089 450 aa27.91■■■□□ 2.06
SIKE1-208ENST00000475335 NFE2L2Q16236 605 aa27.91■■■□□ 2.06
SIKE1-208ENST00000475335 ZNF496Q96IT1 587 aaPredicted RBP27.91■■■□□ 2.06
SIKE1-208ENST00000475335 DLG5Q8TDM6 1919 aa27.9■■■□□ 2.06
SIKE1-208ENST00000475335 HEG1Q9ULI3 1381 aa27.89■■■□□ 2.06
SIKE1-208ENST00000475335 KCNQ3O43525 872 aa27.89■■■□□ 2.06
SIKE1-208ENST00000475335 TTC5Q8N0Z6 440 aa27.89■■■□□ 2.06
SIKE1-208ENST00000475335 RTF1Q92541 710 aaKnown RBP27.89■■■□□ 2.06
SIKE1-208ENST00000475335 ARHGEF1Q92888 912 aaKnown RBP27.89■■■□□ 2.06
SIKE1-208ENST00000475335 UTRNP46939 3433 aa27.87■■■□□ 2.05
SIKE1-208ENST00000475335 TRAPPC3LQ5T215 181 aa27.87■■■□□ 2.05
SIKE1-208ENST00000475335 PNNQ9H307 717 aaKnown RBP27.87■■■□□ 2.05
SIKE1-208ENST00000475335 CCDC87Q9NVE4 849 aa27.87■■■□□ 2.05
SIKE1-208ENST00000475335 GOLGB1Q14789 3259 aaKnown RBP27.87■■■□□ 2.05
SIKE1-208ENST00000475335 BTBD11A6QL63 1104 aa27.86■■■□□ 2.05
SIKE1-208ENST00000475335 SOS1Q07889 1333 aaPredicted RBP27.86■■■□□ 2.05
SIKE1-208ENST00000475335 MAPK8IP3Q9UPT6 1336 aa27.86■■■□□ 2.05
SIKE1-208ENST00000475335 NEFMP07197 916 aa27.85■■■□□ 2.05
SIKE1-208ENST00000475335 ZBTB1Q9Y2K1 713 aa27.84■■■□□ 2.05
SIKE1-208ENST00000475335 GYS1P13807 737 aa27.83■■■□□ 2.05
SIKE1-208ENST00000475335 FMNL2Q96PY5 1086 aa27.83■■■□□ 2.05
SIKE1-208ENST00000475335 THUMPD2Q9BTF0 503 aaKnown RBP27.81■■■□□ 2.04
SIKE1-208ENST00000475335 ADAMTS8Q9UP79 889 aa27.81■■■□□ 2.04
SIKE1-208ENST00000475335 USP42Q9H9J4 1324 aaKnown RBP27.81■■■□□ 2.04
SIKE1-208ENST00000475335 NLGN2Q8NFZ4 835 aa27.8■■■□□ 2.04
SIKE1-208ENST00000475335 KDM3BQ7LBC6 1761 aa27.8■■■□□ 2.04
SIKE1-208ENST00000475335 COL15A1P39059 1388 aa27.79■■■□□ 2.04
SIKE1-208ENST00000475335 RFC4P35249 363 aa27.79■■■□□ 2.04
SIKE1-208ENST00000475335 WDR43Q15061 677 aaKnown RBP eCLIP27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms