RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 TMOD3Q9NYL9 352 aa16.63■□□□□ 0.25
SSR1-205ENST00000475213 KDRP35968 1356 aa16.63■□□□□ 0.25
SSR1-205ENST00000475213 COL24A1Q17RW2 1714 aa16.62■□□□□ 0.25
SSR1-205ENST00000475213 AMOTQ4VCS5 1084 aa16.62■□□□□ 0.25
SSR1-205ENST00000475213 SLC16A10Q8TF71 515 aa16.62■□□□□ 0.25
SSR1-205ENST00000475213 CNGB1Q14028 1251 aaPredicted RBP16.61■□□□□ 0.25
SSR1-205ENST00000475213 ZNF530Q6P9A1 599 aaPredicted RBP16.61■□□□□ 0.25
SSR1-205ENST00000475213 ASAP1Q9ULH1 1129 aa16.61■□□□□ 0.25
SSR1-205ENST00000475213 C4BP0C0L5 1744 aa16.61■□□□□ 0.25
SSR1-205ENST00000475213 HSP90AB1P08238 724 aaKnown RBP16.6■□□□□ 0.25
SSR1-205ENST00000475213 HMGB2P26583 209 aaKnown RBP16.6■□□□□ 0.25
SSR1-205ENST00000475213 DCAF5Q96JK2 942 aa16.6■□□□□ 0.25
SSR1-205ENST00000475213 LOC102724428A0A0B4J2F2 783 aa16.59■□□□□ 0.25
SSR1-205ENST00000475213 ERVV-2B6SEH9 535 aa16.59■□□□□ 0.25
SSR1-205ENST00000475213 SIK1P57059 783 aa16.59■□□□□ 0.25
SSR1-205ENST00000475213 COL23A1Q86Y22 540 aaPredicted RBP16.59■□□□□ 0.25
SSR1-205ENST00000475213 ARXQ96QS3 562 aa16.59■□□□□ 0.25
SSR1-205ENST00000475213 FHDC1Q9C0D6 1143 aaPredicted RBP16.59■□□□□ 0.25
SSR1-205ENST00000475213 KDM6AO15550 1401 aaPredicted RBP16.59■□□□□ 0.25
SSR1-205ENST00000475213 UBR3Q6ZT12 1888 aa16.59■□□□□ 0.25
SSR1-205ENST00000475213 SYT17Q9BSW7 474 aa16.58■□□□□ 0.24
SSR1-205ENST00000475213 ATG3Q9NT62 314 aa16.58■□□□□ 0.24
SSR1-205ENST00000475213 VIRMAQ69YN4 1812 aaKnown RBP16.57■□□□□ 0.24
SSR1-205ENST00000475213 SCN11AQ9UI33 1791 aa16.57■□□□□ 0.24
SSR1-205ENST00000475213 DIAPH1O60610 1272 aaKnown RBP16.57■□□□□ 0.24
SSR1-205ENST00000475213 HMOX1P09601 288 aa16.57■□□□□ 0.24
SSR1-205ENST00000475213 C1orf141Q5JVX7 400 aa16.57■□□□□ 0.24
SSR1-205ENST00000475213 POLD1P28340 1107 aa16.56■□□□□ 0.24
SSR1-205ENST00000475213 LINC00116Q8NCU8 138 aa16.56■□□□□ 0.24
SSR1-205ENST00000475213 COL3A1P02461 1466 aaPredicted RBP16.55■□□□□ 0.24
SSR1-205ENST00000475213 ATP6V1AP38606 617 aa16.55■□□□□ 0.24
SSR1-205ENST00000475213 CABP4P57796 275 aa16.55■□□□□ 0.24
SSR1-205ENST00000475213 ITPK1Q13572 414 aa16.55■□□□□ 0.24
SSR1-205ENST00000475213 FLAD1Q8NFF5 587 aa16.55■□□□□ 0.24
SSR1-205ENST00000475213 AK7Q96M32 723 aa16.55■□□□□ 0.24
SSR1-205ENST00000475213 ZBTB12Q9Y330 459 aaPredicted RBP16.55■□□□□ 0.24
SSR1-205ENST00000475213 ZNF831Q5JPB2 1677 aa16.54■□□□□ 0.24
SSR1-205ENST00000475213 AMIGO3Q86WK7 504 aa16.54■□□□□ 0.24
SSR1-205ENST00000475213 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
SSR1-205ENST00000475213 MAP3K5Q99683 1374 aa16.53■□□□□ 0.24
SSR1-205ENST00000475213 AKAP4Q5JQC9 854 aa16.53■□□□□ 0.24
SSR1-205ENST00000475213 UTRNP46939 3433 aa16.52■□□□□ 0.24
SSR1-205ENST00000475213 MSL1Q68DK7 614 aa16.52■□□□□ 0.24
SSR1-205ENST00000475213 SMIM5Q71RC9 77 aa16.52■□□□□ 0.24
SSR1-205ENST00000475213 NFATC2IPQ8NCF5 419 aa16.52■□□□□ 0.24
SSR1-205ENST00000475213 SLC4A9Q96Q91 983 aa16.52■□□□□ 0.24
SSR1-205ENST00000475213 COL5A3P25940 1745 aaPredicted RBP16.51■□□□□ 0.23
SSR1-205ENST00000475213 PHF14O94880 888 aa16.51■□□□□ 0.23
SSR1-205ENST00000475213 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.5■□□□□ 0.23
SSR1-205ENST00000475213 U2SURPO15042 1029 aaKnown RBP16.5■□□□□ 0.23
SSR1-205ENST00000475213 SSFA2P28290 1259 aa16.5■□□□□ 0.23
SSR1-205ENST00000475213 MTHFSDQ2M296 383 aaKnown RBP16.5■□□□□ 0.23
SSR1-205ENST00000475213 KLHL34Q8N239 644 aa16.5■□□□□ 0.23
SSR1-205ENST00000475213 MYH14Q7Z406 1995 aaKnown RBP16.49■□□□□ 0.23
SSR1-205ENST00000475213 GNPATO15228 680 aa16.49■□□□□ 0.23
SSR1-205ENST00000475213 LGR6Q9HBX8 967 aa16.49■□□□□ 0.23
SSR1-205ENST00000475213 RNMTO43148 476 aaKnown RBP16.48■□□□□ 0.23
SSR1-205ENST00000475213 ADAMTS7Q9UKP4 1686 aa16.48■□□□□ 0.23
SSR1-205ENST00000475213 GOLGB1Q14789 3259 aaKnown RBP16.48■□□□□ 0.23
SSR1-205ENST00000475213 PTCD1O75127 700 aaKnown RBP16.47■□□□□ 0.23
SSR1-205ENST00000475213 PPP2R1AP30153 589 aa16.47■□□□□ 0.23
SSR1-205ENST00000475213 CFAP53Q96M91 514 aa16.47■□□□□ 0.23
SSR1-205ENST00000475213 SLC52A2Q9HAB3 445 aa16.47■□□□□ 0.23
SSR1-205ENST00000475213 MRC1P22897 1456 aa16.47■□□□□ 0.23
SSR1-205ENST00000475213 YY1P25490 414 aa16.46■□□□□ 0.23
SSR1-205ENST00000475213 RC3H1Q5TC82 1133 aaKnown RBP16.46■□□□□ 0.23
SSR1-205ENST00000475213 TJP1Q07157 1748 aa16.45■□□□□ 0.22
SSR1-205ENST00000475213 CHD4Q14839 1912 aa16.45■□□□□ 0.22
SSR1-205ENST00000475213 NLGN2Q8NFZ4 835 aa16.45■□□□□ 0.22
SSR1-205ENST00000475213 RTCBQ9Y3I0 505 aaKnown RBP16.45■□□□□ 0.22
SSR1-205ENST00000475213 CICQ96RK0 1608 aaPredicted RBP16.45■□□□□ 0.22
SSR1-205ENST00000475213 CNTNAP4Q9C0A0 1308 aa16.45■□□□□ 0.22
SSR1-205ENST00000475213 TRAPPC3LQ5T215 181 aa16.43■□□□□ 0.22
SSR1-205ENST00000475213 GAS2L2Q8NHY3 880 aa16.43■□□□□ 0.22
SSR1-205ENST00000475213 RPS6KA4O75676 772 aa16.42■□□□□ 0.22
SSR1-205ENST00000475213 SLC39A6Q13433 755 aa16.42■□□□□ 0.22
SSR1-205ENST00000475213 RSPH6AQ9H0K4 717 aa16.42■□□□□ 0.22
SSR1-205ENST00000475213 NUDCQ9Y266 331 aa16.42■□□□□ 0.22
SSR1-205ENST00000475213 C4AP0C0L4 1744 aa16.42■□□□□ 0.22
SSR1-205ENST00000475213 GNAT3A8MTJ3 354 aa16.41■□□□□ 0.22
SSR1-205ENST00000475213 PRKAR2BP31323 418 aa16.41■□□□□ 0.22
SSR1-205ENST00000475213 CRKLP46109 303 aaKnown RBP16.41■□□□□ 0.22
SSR1-205ENST00000475213 GPR162Q16538 588 aa16.41■□□□□ 0.22
SSR1-205ENST00000475213 ARHGEF1Q92888 912 aaKnown RBP16.41■□□□□ 0.22
SSR1-205ENST00000475213 PHACTR3Q96KR7 559 aa16.41■□□□□ 0.22
SSR1-205ENST00000475213 CD2APQ9Y5K6 639 aa16.41■□□□□ 0.22
SSR1-205ENST00000475213 SIPA1L3O60292 1781 aaPredicted RBP16.41■□□□□ 0.22
SSR1-205ENST00000475213 KCPQ6ZWJ8 1503 aa16.4■□□□□ 0.22
SSR1-205ENST00000475213 U2AF1L5P0DN76 240 aaPredicted RBP16.4■□□□□ 0.22
SSR1-205ENST00000475213 U2AF1Q01081 240 aaKnown RBP eCLIP16.4■□□□□ 0.221e-7■□□□□ 8.3
SSR1-205ENST00000475213 UBR2Q8IWV8 1755 aa16.4■□□□□ 0.22
SSR1-205ENST00000475213 DNAJC10Q8IXB1 793 aa16.39■□□□□ 0.21
SSR1-205ENST00000475213 PELP1Q8IZL8 1130 aaKnown RBP16.39■□□□□ 0.21
SSR1-205ENST00000475213 IL17REQ8NFR9 667 aa16.39■□□□□ 0.21
SSR1-205ENST00000475213 RFC4P35249 363 aa16.38■□□□□ 0.21
SSR1-205ENST00000475213 FCHSD2O94868 740 aa16.37■□□□□ 0.21
SSR1-205ENST00000475213 MMP10P09238 476 aa16.37■□□□□ 0.21
SSR1-205ENST00000475213 INTS5Q6P9B9 1019 aaKnown RBP16.37■□□□□ 0.21
SSR1-205ENST00000475213 GYS1P13807 737 aa16.36■□□□□ 0.21
SSR1-205ENST00000475213 TEFQ10587 303 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms