RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 IGSF1Q8N6C5 1336 aa34.27■■■■□ 3.08
TMEM54-205ENST00000475208 HSPA5P11021 654 aaKnown RBP34.25■■■■□ 3.07
TMEM54-205ENST00000475208 PANK3Q9H999 370 aa34.25■■■■□ 3.07
TMEM54-205ENST00000475208 KDRP35968 1356 aa34.22■■■■□ 3.07
TMEM54-205ENST00000475208 ATP10DQ9P241 1426 aa34.21■■■■□ 3.07
TMEM54-205ENST00000475208 HSP90AB1P08238 724 aaKnown RBP34.18■■■■□ 3.06
TMEM54-205ENST00000475208 WWC3Q9ULE0 1092 aa34.18■■■■□ 3.06
TMEM54-205ENST00000475208 ERVV-2B6SEH9 535 aa34.17■■■■□ 3.06
TMEM54-205ENST00000475208 PLEKHO1Q53GL0 409 aaPredicted RBP34.17■■■■□ 3.06
TMEM54-205ENST00000475208 DCAF5Q96JK2 942 aa34.17■■■■□ 3.06
TMEM54-205ENST00000475208 KDM6AO15550 1401 aaPredicted RBP34.15■■■■□ 3.06
TMEM54-205ENST00000475208 ZNF530Q6P9A1 599 aaPredicted RBP34.15■■■■□ 3.06
TMEM54-205ENST00000475208 SLC4A9Q96Q91 983 aa34.15■■■■□ 3.06
TMEM54-205ENST00000475208 RBM42Q9BTD8 480 aaKnown RBP34.15■■■■□ 3.06
TMEM54-205ENST00000475208 ZNF831Q5JPB2 1677 aa34.14■■■■□ 3.06
TMEM54-205ENST00000475208 MMP10P09238 476 aa34.13■■■■□ 3.05
TMEM54-205ENST00000475208 MORC1Q86VD1 984 aa34.13■■■■□ 3.05
TMEM54-205ENST00000475208 RTCBQ9Y3I0 505 aaKnown RBP34.13■■■■□ 3.05
TMEM54-205ENST00000475208 ADCY9O60503 1353 aa34.12■■■■□ 3.05
TMEM54-205ENST00000475208 AMOTQ4VCS5 1084 aa34.12■■■■□ 3.05
TMEM54-205ENST00000475208 AEBP1Q8IUX7 1158 aa34.11■■■■□ 3.05
TMEM54-205ENST00000475208 COL5A3P25940 1745 aaPredicted RBP34.1■■■■□ 3.05
TMEM54-205ENST00000475208 TRAPPC3LQ5T215 181 aa34.1■■■■□ 3.05
TMEM54-205ENST00000475208 CABP4P57796 275 aa34.09■■■■□ 3.05
TMEM54-205ENST00000475208 CNTNAP4Q9C0A0 1308 aa34.07■■■■□ 3.05
TMEM54-205ENST00000475208 RC3H1Q5TC82 1133 aaKnown RBP34.07■■■■□ 3.04
TMEM54-205ENST00000475208 GPBP1L1Q9HC44 474 aaPredicted RBP34.07■■■■□ 3.04
TMEM54-205ENST00000475208 CICQ96RK0 1608 aaPredicted RBP34.07■■■■□ 3.04
TMEM54-205ENST00000475208 ADRA2BP18089 450 aa34.06■■■■□ 3.04
TMEM54-205ENST00000475208 C1orf141Q5JVX7 400 aa34.06■■■■□ 3.04
TMEM54-205ENST00000475208 MTHFSP49914 203 aa34.05■■■■□ 3.04
TMEM54-205ENST00000475208 PXDNLA1KZ92 1463 aa34.05■■■■□ 3.04
TMEM54-205ENST00000475208 NLGN1Q8N2Q7 840 aa34.04■■■■□ 3.04
TMEM54-205ENST00000475208 ZNF526Q8TF50 670 aaPredicted RBP34.04■■■■□ 3.04
TMEM54-205ENST00000475208 ARHGEF1Q92888 912 aaKnown RBP34.04■■■■□ 3.04
TMEM54-205ENST00000475208 KNSTRNQ9Y448 316 aa34.04■■■■□ 3.04
TMEM54-205ENST00000475208 KIF13BQ9NQT8 1826 aa34.04■■■■□ 3.04
TMEM54-205ENST00000475208 SULT6B1Q6IMI4 303 aa34.03■■■■□ 3.04
TMEM54-205ENST00000475208 CCER1Q8TC90 406 aaPredicted RBP34.03■■■■□ 3.04
TMEM54-205ENST00000475208 RPS6KA4O75676 772 aa34.02■■■■□ 3.04
TMEM54-205ENST00000475208 KIAA1551Q9HCM1 1747 aa34.01■■■■□ 3.04
TMEM54-205ENST00000475208 C10orf71Q711Q0 1435 aa34.01■■■■□ 3.03
TMEM54-205ENST00000475208 PTCD1O75127 700 aaKnown RBP34■■■■□ 3.03
TMEM54-205ENST00000475208 RFC4P35249 363 aa34■■■■□ 3.03
TMEM54-205ENST00000475208 C4AP0C0L4 1744 aa33.99■■■■□ 3.03
TMEM54-205ENST00000475208 GYS1P13807 737 aa33.99■■■■□ 3.03
TMEM54-205ENST00000475208 IL13P35225 146 aa33.99■■■■□ 3.03
TMEM54-205ENST00000475208 N4BP2Q86UW6 1770 aaPredicted RBP33.98■■■■□ 3.03
TMEM54-205ENST00000475208 MYH14Q7Z406 1995 aaKnown RBP33.98■■■■□ 3.03
TMEM54-205ENST00000475208 TGFB2P61812 414 aa33.98■■■■□ 3.03
TMEM54-205ENST00000475208 NFATC2IPQ8NCF5 419 aa33.98■■■■□ 3.03
TMEM54-205ENST00000475208 CCDC87Q9NVE4 849 aa33.96■■■■□ 3.03
TMEM54-205ENST00000475208 A0A0G2JLW4 131 aa33.94■■■■□ 3.02
TMEM54-205ENST00000475208 CRKLP46109 303 aaKnown RBP33.94■■■■□ 3.02
TMEM54-205ENST00000475208 AMER1Q5JTC6 1135 aaPredicted RBP33.94■■■■□ 3.02
TMEM54-205ENST00000475208 PARP3Q9Y6F1 533 aa33.94■■■■□ 3.02
TMEM54-205ENST00000475208 CEP350Q5VT06 3117 aa33.94■■■■□ 3.02
TMEM54-205ENST00000475208 TJP1Q07157 1748 aa33.93■■■■□ 3.02
TMEM54-205ENST00000475208 SCN11AQ9UI33 1791 aa33.93■■■■□ 3.02
TMEM54-205ENST00000475208 BCS1LQ9Y276 419 aa33.93■■■■□ 3.02
TMEM54-205ENST00000475208 DPEP1P16444 411 aa33.89■■■■□ 3.02
TMEM54-205ENST00000475208 AKAP4Q5JQC9 854 aa33.89■■■■□ 3.02
TMEM54-205ENST00000475208 SRP68Q9UHB9 627 aaKnown RBP33.89■■■■□ 3.02
TMEM54-205ENST00000475208 KIF7Q2M1P5 1343 aa33.88■■■■□ 3.01
TMEM54-205ENST00000475208 USP42Q9H9J4 1324 aaKnown RBP33.87■■■■□ 3.01
TMEM54-205ENST00000475208 BRCA1P38398 1863 aaKnown RBP33.85■■■■□ 3.01
TMEM54-205ENST00000475208 FKBP8Q14318 412 aa33.85■■■■□ 3.01
TMEM54-205ENST00000475208 SLC52A2Q9HAB3 445 aa33.85■■■■□ 3.01
TMEM54-205ENST00000475208 FCHSD2O94868 740 aa33.84■■■■□ 3.01
TMEM54-205ENST00000475208 MRC1P22897 1456 aa33.83■■■■□ 3.01
TMEM54-205ENST00000475208 KIF3CO14782 793 aa33.83■■■■□ 3.01
TMEM54-205ENST00000475208 HMOX1P09601 288 aa33.83■■■■□ 3.01
TMEM54-205ENST00000475208 INTS5Q6P9B9 1019 aaKnown RBP33.83■■■■□ 3.01
TMEM54-205ENST00000475208 ARHGAP27Q6ZUM4 889 aa33.83■■■■□ 3.01
TMEM54-205ENST00000475208 HSPA6P17066 643 aa33.82■■■■□ 3
TMEM54-205ENST00000475208 DNAJC10Q8IXB1 793 aa33.82■■■■□ 3
TMEM54-205ENST00000475208 LGR6Q9HBX8 967 aa33.82■■■■□ 3
TMEM54-205ENST00000475208 DDR1Q08345 913 aa33.81■■■■□ 3
TMEM54-205ENST00000475208 ADAMTS7Q9UKP4 1686 aa33.8■■■■□ 3
TMEM54-205ENST00000475208 RNMTO43148 476 aaKnown RBP33.79■■■■□ 3
TMEM54-205ENST00000475208 KCNA3P22001 575 aa33.79■■■■□ 3
TMEM54-205ENST00000475208 SLC39A6Q13433 755 aa33.77■■■■□ 3
TMEM54-205ENST00000475208 VIRMAQ69YN4 1812 aaKnown RBP33.76■■■■□ 3
TMEM54-205ENST00000475208 CC2D1BQ5T0F9 858 aaKnown RBP33.76■■■□□ 2.99
TMEM54-205ENST00000475208 ARFGEF1Q9Y6D6 1849 aa33.76■■■□□ 2.99
TMEM54-205ENST00000475208 SOS1Q07889 1333 aaPredicted RBP33.76■■■□□ 2.99
TMEM54-205ENST00000475208 KCPQ6ZWJ8 1503 aa33.75■■■□□ 2.99
TMEM54-205ENST00000475208 PER1O15534 1290 aaPredicted RBP33.75■■■□□ 2.99
TMEM54-205ENST00000475208 DIAPH1O60610 1272 aaKnown RBP33.75■■■□□ 2.99
TMEM54-205ENST00000475208 MTHFSDQ2M296 383 aaKnown RBP33.75■■■□□ 2.99
TMEM54-205ENST00000475208 PIM2Q9P1W9 311 aa33.75■■■□□ 2.99
TMEM54-205ENST00000475208 ZPR1O75312 459 aa33.74■■■□□ 2.99
TMEM54-205ENST00000475208 POLRMTO00411 1230 aaKnown RBP33.73■■■□□ 2.99
TMEM54-205ENST00000475208 CYP19A1P11511 503 aaPredicted RBP33.73■■■□□ 2.99
TMEM54-205ENST00000475208 USPL1Q5W0Q7 1092 aa33.73■■■□□ 2.99
TMEM54-205ENST00000475208 TM4SF1P30408 202 aa33.72■■■□□ 2.99
TMEM54-205ENST00000475208 DALRD3Q5D0E6 543 aaKnown RBP33.71■■■□□ 2.99
TMEM54-205ENST00000475208 CHRNA5P30532 468 aa33.7■■■□□ 2.99
TMEM54-205ENST00000475208 C9orf131Q5VYM1 1079 aa33.69■■■□□ 2.98
TMEM54-205ENST00000475208 ZBTB1Q9Y2K1 713 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms