RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 PANK3Q9H999 370 aa21.48■■□□□ 1.03
SRRT-209ENST00000474896 GPBP1L1Q9HC44 474 aaPredicted RBP21.48■■□□□ 1.03
SRRT-209ENST00000474896 ERVV-2B6SEH9 535 aa21.47■■□□□ 1.03
SRRT-209ENST00000474896 TRAPPC3LQ5T215 181 aa21.47■■□□□ 1.03
SRRT-209ENST00000474896 CCER1Q8TC90 406 aaPredicted RBP21.47■■□□□ 1.03
SRRT-209ENST00000474896 RBM42Q9BTD8 480 aaKnown RBP21.47■■□□□ 1.03
SRRT-209ENST00000474896 MMP10P09238 476 aa21.46■■□□□ 1.03
SRRT-209ENST00000474896 PLEKHO1Q53GL0 409 aaPredicted RBP21.46■■□□□ 1.03
SRRT-209ENST00000474896 ZNF526Q8TF50 670 aaPredicted RBP21.46■■□□□ 1.03
SRRT-209ENST00000474896 RTCBQ9Y3I0 505 aaKnown RBP21.46■■□□□ 1.03
SRRT-209ENST00000474896 HSP90AB1P08238 724 aaKnown RBP21.45■■□□□ 1.02
SRRT-209ENST00000474896 EIF4G2P78344 907 aaKnown RBP eCLIP21.45■■□□□ 1.02
SRRT-209ENST00000474896 DCAF5Q96JK2 942 aa21.45■■□□□ 1.02
SRRT-209ENST00000474896 SLC4A9Q96Q91 983 aa21.45■■□□□ 1.02
SRRT-209ENST00000474896 CLSPNQ9HAW4 1339 aa21.45■■□□□ 1.02
SRRT-209ENST00000474896 HSPA5P11021 654 aaKnown RBP21.44■■□□□ 1.02
SRRT-209ENST00000474896 ADCY9O60503 1353 aa21.42■■□□□ 1.02
SRRT-209ENST00000474896 CABP4P57796 275 aa21.42■■□□□ 1.02
SRRT-209ENST00000474896 AMOTQ4VCS5 1084 aa21.42■■□□□ 1.02
SRRT-209ENST00000474896 RC3H1Q5TC82 1133 aaKnown RBP21.42■■□□□ 1.02
SRRT-209ENST00000474896 ZNF530Q6P9A1 599 aaPredicted RBP21.42■■□□□ 1.02
SRRT-209ENST00000474896 NLGN1Q8N2Q7 840 aa21.42■■□□□ 1.02
SRRT-209ENST00000474896 ARHGEF1Q92888 912 aaKnown RBP21.42■■□□□ 1.02
SRRT-209ENST00000474896 PLEKHG2Q9H7P9 1386 aa21.42■■□□□ 1.02
SRRT-209ENST00000474896 KDRP35968 1356 aa21.41■■□□□ 1.02
SRRT-209ENST00000474896 MTHFSP49914 203 aa21.4■■□□□ 1.02
SRRT-209ENST00000474896 MORC1Q86VD1 984 aa21.4■■□□□ 1.02
SRRT-209ENST00000474896 A0A0G2JLW4 131 aa21.39■■□□□ 1.01
SRRT-209ENST00000474896 RPS6KA4O75676 772 aa21.39■■□□□ 1.01
SRRT-209ENST00000474896 RFC4P35249 363 aa21.39■■□□□ 1.01
SRRT-209ENST00000474896 TGFB2P61812 414 aa21.39■■□□□ 1.01
SRRT-209ENST00000474896 AEBP1Q8IUX7 1158 aa21.39■■□□□ 1.01
SRRT-209ENST00000474896 ADRA2BP18089 450 aa21.38■■□□□ 1.01
SRRT-209ENST00000474896 CNTNAP4Q9C0A0 1308 aa21.37■■□□□ 1.01
SRRT-209ENST00000474896 PTCD1O75127 700 aaKnown RBP21.37■■□□□ 1.01
SRRT-209ENST00000474896 GYS1P13807 737 aa21.37■■□□□ 1.01
SRRT-209ENST00000474896 C1orf141Q5JVX7 400 aa21.37■■□□□ 1.01
SRRT-209ENST00000474896 NFATC2IPQ8NCF5 419 aa21.37■■□□□ 1.01
SRRT-209ENST00000474896 KDM6AO15550 1401 aaPredicted RBP21.37■■□□□ 1.01
SRRT-209ENST00000474896 SULT6B1Q6IMI4 303 aa21.36■■□□□ 1.01
SRRT-209ENST00000474896 BCS1LQ9Y276 419 aa21.36■■□□□ 1.01
SRRT-209ENST00000474896 CCDC87Q9NVE4 849 aa21.35■■□□□ 1.01
SRRT-209ENST00000474896 PARP3Q9Y6F1 533 aa21.35■■□□□ 1.01
SRRT-209ENST00000474896 PXDNLA1KZ92 1463 aa21.34■■□□□ 1.01
SRRT-209ENST00000474896 CICQ96RK0 1608 aaPredicted RBP21.34■■□□□ 1.01
SRRT-209ENST00000474896 DPEP1P16444 411 aa21.34■■□□□ 1.01
SRRT-209ENST00000474896 KNSTRNQ9Y448 316 aa21.34■■□□□ 1.01
SRRT-209ENST00000474896 ZNF831Q5JPB2 1677 aa21.34■■□□□ 1.01
SRRT-209ENST00000474896 N4BP2Q86UW6 1770 aaPredicted RBP21.33■■□□□ 1.01
SRRT-209ENST00000474896 HSPA6P17066 643 aa21.33■■□□□ 1.01
SRRT-209ENST00000474896 ARHGAP27Q6ZUM4 889 aa21.33■■□□□ 1.01
SRRT-209ENST00000474896 MYH14Q7Z406 1995 aaKnown RBP21.32■■□□□ 1
SRRT-209ENST00000474896 KIF13BQ9NQT8 1826 aa21.32■■□□□ 1
SRRT-209ENST00000474896 KIF3CO14782 793 aa21.32■■□□□ 1
SRRT-209ENST00000474896 IL13P35225 146 aa21.32■■□□□ 1
SRRT-209ENST00000474896 CRKLP46109 303 aaKnown RBP21.32■■□□□ 1
SRRT-209ENST00000474896 COL5A3P25940 1745 aaPredicted RBP21.31■■□□□ 1
SRRT-209ENST00000474896 C10orf71Q711Q0 1435 aa21.3■■□□□ 1
SRRT-209ENST00000474896 FCHSD2O94868 740 aa21.3■■□□□ 1
SRRT-209ENST00000474896 SRP68Q9UHB9 627 aaKnown RBP21.3■■□□□ 1
SRRT-209ENST00000474896 KIAA1551Q9HCM1 1747 aa21.29■■□□□ 1
SRRT-209ENST00000474896 CEP350Q5VT06 3117 aa21.28■■□□□ 1
SRRT-209ENST00000474896 KCNA3P22001 575 aa21.28■■□□□ 1
SRRT-209ENST00000474896 FKBP8Q14318 412 aa21.28■■□□□ 1
SRRT-209ENST00000474896 C4AP0C0L4 1744 aa21.28■■□□□ 1
SRRT-209ENST00000474896 INTS5Q6P9B9 1019 aaKnown RBP21.27■■□□□ 1
SRRT-209ENST00000474896 AKAP4Q5JQC9 854 aa21.26■□□□□ 0.99
SRRT-209ENST00000474896 LGR6Q9HBX8 967 aa21.26■□□□□ 0.99
SRRT-209ENST00000474896 PIM2Q9P1W9 311 aa21.26■□□□□ 0.99
SRRT-209ENST00000474896 USP42Q9H9J4 1324 aaKnown RBP21.26■□□□□ 0.99
SRRT-209ENST00000474896 DDR1Q08345 913 aa21.24■□□□□ 0.99
SRRT-209ENST00000474896 AMER1Q5JTC6 1135 aaPredicted RBP21.24■□□□□ 0.99
SRRT-209ENST00000474896 IFFO2Q5TF58 517 aa21.24■□□□□ 0.99
SRRT-209ENST00000474896 DNAJC10Q8IXB1 793 aa21.24■□□□□ 0.99
SRRT-209ENST00000474896 SLC52A2Q9HAB3 445 aa21.24■□□□□ 0.99
SRRT-209ENST00000474896 RNMTO43148 476 aaKnown RBP21.22■□□□□ 0.99
SRRT-209ENST00000474896 ZPR1O75312 459 aa21.22■□□□□ 0.99
SRRT-209ENST00000474896 HMOX1P09601 288 aa21.22■□□□□ 0.99
SRRT-209ENST00000474896 TM4SF1P30408 202 aa21.22■□□□□ 0.99
SRRT-209ENST00000474896 SLC39A6Q13433 755 aa21.22■□□□□ 0.99
SRRT-209ENST00000474896 DALRD3Q5D0E6 543 aaKnown RBP21.22■□□□□ 0.99
SRRT-209ENST00000474896 C9orf131Q5VYM1 1079 aa21.22■□□□□ 0.99
SRRT-209ENST00000474896 SCN11AQ9UI33 1791 aa21.22■□□□□ 0.99
SRRT-209ENST00000474896 TOMM70O94826 608 aa21.21■□□□□ 0.99
SRRT-209ENST00000474896 CHRNA5P30532 468 aa21.21■□□□□ 0.99
SRRT-209ENST00000474896 NMRK2Q9NPI5 230 aa21.21■□□□□ 0.99
SRRT-209ENST00000474896 POLRMTO00411 1230 aaKnown RBP21.2■□□□□ 0.98
SRRT-209ENST00000474896 USPL1Q5W0Q7 1092 aa21.2■□□□□ 0.98
SRRT-209ENST00000474896 TJP1Q07157 1748 aa21.2■□□□□ 0.98
SRRT-209ENST00000474896 BRCA1P38398 1863 aaKnown RBP21.2■□□□□ 0.98
SRRT-209ENST00000474896 CYP19A1P11511 503 aaPredicted RBP21.19■□□□□ 0.98
SRRT-209ENST00000474896 APLP1P51693 650 aa21.18■□□□□ 0.98
SRRT-209ENST00000474896 MTHFSDQ2M296 383 aaKnown RBP21.18■□□□□ 0.98
SRRT-209ENST00000474896 SOS1Q07889 1333 aaPredicted RBP21.17■□□□□ 0.98
SRRT-209ENST00000474896 KIF7Q2M1P5 1343 aa21.17■□□□□ 0.98
SRRT-209ENST00000474896 ARFGEF1Q9Y6D6 1849 aa21.16■□□□□ 0.98
SRRT-209ENST00000474896 DIAPH1O60610 1272 aaKnown RBP21.16■□□□□ 0.98
SRRT-209ENST00000474896 CC2D1BQ5T0F9 858 aaKnown RBP21.16■□□□□ 0.98
SRRT-209ENST00000474896 NARFQ9UHQ1 456 aa21.16■□□□□ 0.98
SRRT-209ENST00000474896 PER1O15534 1290 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms