RNA–Protein interactions for RNA: ENST00000474880.5

ARPC1B-216, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-216ENST00000474880 U2SURPO15042 1029 aaKnown RBP14.87□□□□□ -0.03
ARPC1B-216ENST00000474880 MSH5O43196 834 aa14.87□□□□□ -0.03
ARPC1B-216ENST00000474880 AMIGO3Q86WK7 504 aa14.87□□□□□ -0.03
ARPC1B-216ENST00000474880 ZNF831Q5JPB2 1677 aa14.87□□□□□ -0.03
ARPC1B-216ENST00000474880 HMOX1P09601 288 aa14.86□□□□□ -0.03
ARPC1B-216ENST00000474880 HMGB2P26583 209 aaKnown RBP14.86□□□□□ -0.03
ARPC1B-216ENST00000474880 ITPK1Q13572 414 aa14.86□□□□□ -0.03
ARPC1B-216ENST00000474880 C1orf141Q5JVX7 400 aa14.86□□□□□ -0.03
ARPC1B-216ENST00000474880 LINC00116Q8NCU8 138 aa14.86□□□□□ -0.03
ARPC1B-216ENST00000474880 NUDCQ9Y266 331 aa14.86□□□□□ -0.03
ARPC1B-216ENST00000474880 COL5A3P25940 1745 aaPredicted RBP14.86□□□□□ -0.03
ARPC1B-216ENST00000474880 MYH14Q7Z406 1995 aaKnown RBP14.85□□□□□ -0.03
ARPC1B-216ENST00000474880 POLD1P28340 1107 aa14.85□□□□□ -0.03
ARPC1B-216ENST00000474880 SMIM5Q71RC9 77 aa14.85□□□□□ -0.03
ARPC1B-216ENST00000474880 MAP3K5Q99683 1374 aa14.85□□□□□ -0.03
ARPC1B-216ENST00000474880 ATP6V1AP38606 617 aa14.84□□□□□ -0.03
ARPC1B-216ENST00000474880 CABP4P57796 275 aa14.84□□□□□ -0.03
ARPC1B-216ENST00000474880 RALBP1Q15311 655 aa14.84□□□□□ -0.03
ARPC1B-216ENST00000474880 AK7Q96M32 723 aa14.84□□□□□ -0.03
ARPC1B-216ENST00000474880 SLC4A9Q96Q91 983 aa14.84□□□□□ -0.03
ARPC1B-216ENST00000474880 CHD4Q14839 1912 aa14.84□□□□□ -0.03
ARPC1B-216ENST00000474880 DCAF8L1A6NGE4 600 aa14.83□□□□□ -0.04
ARPC1B-216ENST00000474880 MSL1Q68DK7 614 aa14.83□□□□□ -0.04
ARPC1B-216ENST00000474880 FLAD1Q8NFF5 587 aa14.83□□□□□ -0.04
ARPC1B-216ENST00000474880 AKAP4Q5JQC9 854 aa14.82□□□□□ -0.04
ARPC1B-216ENST00000474880 NFATC2IPQ8NCF5 419 aa14.82□□□□□ -0.04
ARPC1B-216ENST00000474880 ADAMTS7Q9UKP4 1686 aa14.81□□□□□ -0.04
ARPC1B-216ENST00000474880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.81□□□□□ -0.04
ARPC1B-216ENST00000474880 PHF14O94880 888 aa14.81□□□□□ -0.04
ARPC1B-216ENST00000474880 RBM42Q9BTD8 480 aaKnown RBP14.81□□□□□ -0.04
ARPC1B-216ENST00000474880 TJP1Q07157 1748 aa14.8□□□□□ -0.04
ARPC1B-216ENST00000474880 GNPATO15228 680 aa14.8□□□□□ -0.04
ARPC1B-216ENST00000474880 U2AF1L5P0DN76 240 aaPredicted RBP14.8□□□□□ -0.04
ARPC1B-216ENST00000474880 U2AF1Q01081 240 aaKnown RBP eCLIP14.8□□□□□ -0.04
ARPC1B-216ENST00000474880 MTHFSDQ2M296 383 aaKnown RBP14.8□□□□□ -0.04
ARPC1B-216ENST00000474880 KLHL34Q8N239 644 aa14.8□□□□□ -0.04
ARPC1B-216ENST00000474880 LGR6Q9HBX8 967 aa14.8□□□□□ -0.04
ARPC1B-216ENST00000474880 SSFA2P28290 1259 aa14.79□□□□□ -0.04
ARPC1B-216ENST00000474880 CICQ96RK0 1608 aaPredicted RBP14.78□□□□□ -0.04
ARPC1B-216ENST00000474880 MRC1P22897 1456 aa14.78□□□□□ -0.04
ARPC1B-216ENST00000474880 ZNF316A6NFI3 1004 aaPredicted RBP14.78□□□□□ -0.04
ARPC1B-216ENST00000474880 RNMTO43148 476 aaKnown RBP14.78□□□□□ -0.04
ARPC1B-216ENST00000474880 PTCD1O75127 700 aaKnown RBP14.78□□□□□ -0.04
ARPC1B-216ENST00000474880 NLGN2Q8NFZ4 835 aa14.78□□□□□ -0.04
ARPC1B-216ENST00000474880 GAS2L2Q8NHY3 880 aa14.78□□□□□ -0.04
ARPC1B-216ENST00000474880 UTRNP46939 3433 aa14.78□□□□□ -0.04
ARPC1B-216ENST00000474880 C4AP0C0L4 1744 aa14.78□□□□□ -0.04
ARPC1B-216ENST00000474880 MYBBP1AQ9BQG0 1328 aaKnown RBP14.77□□□□□ -0.04
ARPC1B-216ENST00000474880 YY1P25490 414 aa14.77□□□□□ -0.05
ARPC1B-216ENST00000474880 PRKAR2BP31323 418 aa14.77□□□□□ -0.05
ARPC1B-216ENST00000474880 SLC52A2Q9HAB3 445 aa14.77□□□□□ -0.05
ARPC1B-216ENST00000474880 SIPA1L3O60292 1781 aaPredicted RBP14.77□□□□□ -0.05
ARPC1B-216ENST00000474880 FCHSD2O94868 740 aa14.76□□□□□ -0.05
ARPC1B-216ENST00000474880 RC3H1Q5TC82 1133 aaKnown RBP14.76□□□□□ -0.05
ARPC1B-216ENST00000474880 RSPH6AQ9H0K4 717 aa14.76□□□□□ -0.05
ARPC1B-216ENST00000474880 UBR2Q8IWV8 1755 aa14.75□□□□□ -0.05
ARPC1B-216ENST00000474880 CNTNAP4Q9C0A0 1308 aa14.75□□□□□ -0.05
ARPC1B-216ENST00000474880 NEFMP07197 916 aa14.75□□□□□ -0.05
ARPC1B-216ENST00000474880 GOLGB1Q14789 3259 aaKnown RBP14.75□□□□□ -0.05
ARPC1B-216ENST00000474880 SLC39A6Q13433 755 aa14.74□□□□□ -0.05
ARPC1B-216ENST00000474880 RTCBQ9Y3I0 505 aaKnown RBP14.74□□□□□ -0.05
ARPC1B-216ENST00000474880 KCPQ6ZWJ8 1503 aa14.73□□□□□ -0.05
ARPC1B-216ENST00000474880 GNAT3A8MTJ3 354 aa14.73□□□□□ -0.05
ARPC1B-216ENST00000474880 RPS6KA4O75676 772 aa14.73□□□□□ -0.05
ARPC1B-216ENST00000474880 GPR162Q16538 588 aa14.73□□□□□ -0.05
ARPC1B-216ENST00000474880 TRAPPC3LQ5T215 181 aa14.73□□□□□ -0.05
ARPC1B-216ENST00000474880 ARHGEF1Q92888 912 aaKnown RBP14.73□□□□□ -0.05
ARPC1B-216ENST00000474880 PHACTR3Q96KR7 559 aa14.73□□□□□ -0.05
ARPC1B-216ENST00000474880 PNNQ9H307 717 aaKnown RBP14.73□□□□□ -0.05
ARPC1B-216ENST00000474880 CRKLP46109 303 aaKnown RBP14.72□□□□□ -0.05
ARPC1B-216ENST00000474880 PRKRIP1Q9H875 184 aaPredicted RBP14.72□□□□□ -0.05
ARPC1B-216ENST00000474880 CD2APQ9Y5K6 639 aa14.72□□□□□ -0.05
ARPC1B-216ENST00000474880 KIF13BQ9NQT8 1826 aa14.71□□□□□ -0.05
ARPC1B-216ENST00000474880 ADRA2BP18089 450 aa14.71□□□□□ -0.05
ARPC1B-216ENST00000474880 DNAJC10Q8IXB1 793 aa14.71□□□□□ -0.05
ARPC1B-216ENST00000474880 PELP1Q8IZL8 1130 aaKnown RBP14.71□□□□□ -0.05
ARPC1B-216ENST00000474880 IL17REQ8NFR9 667 aa14.71□□□□□ -0.05
ARPC1B-216ENST00000474880 DLG5Q8TDM6 1919 aa14.7□□□□□ -0.06
ARPC1B-216ENST00000474880 INTS5Q6P9B9 1019 aaKnown RBP14.7□□□□□ -0.06
ARPC1B-216ENST00000474880 MAPK8IP3Q9UPT6 1336 aa14.69□□□□□ -0.06
ARPC1B-216ENST00000474880 MMP10P09238 476 aa14.69□□□□□ -0.06
ARPC1B-216ENST00000474880 GYS1P13807 737 aa14.69□□□□□ -0.06
ARPC1B-216ENST00000474880 YBX3P16989 372 aaKnown RBP eCLIP14.69□□□□□ -0.063e-9■■■■□ 22.7
ARPC1B-216ENST00000474880 RFC4P35249 363 aa14.69□□□□□ -0.06
ARPC1B-216ENST00000474880 TEFQ10587 303 aa14.69□□□□□ -0.06
ARPC1B-216ENST00000474880 RTF1Q92541 710 aaKnown RBP14.69□□□□□ -0.06
ARPC1B-216ENST00000474880 N4BP2Q86UW6 1770 aaPredicted RBP14.69□□□□□ -0.06
ARPC1B-216ENST00000474880 KIAA1551Q9HCM1 1747 aa14.69□□□□□ -0.06
ARPC1B-216ENST00000474880 CYP19A1P11511 503 aaPredicted RBP14.68□□□□□ -0.06
ARPC1B-216ENST00000474880 WDR43Q15061 677 aaKnown RBP eCLIP14.67□□□□□ -0.06
ARPC1B-216ENST00000474880 NLGN1Q8N2Q7 840 aa14.67□□□□□ -0.06
ARPC1B-216ENST00000474880 CCDC87Q9NVE4 849 aa14.67□□□□□ -0.06
ARPC1B-216ENST00000474880 SRP68Q9UHB9 627 aaKnown RBP14.67□□□□□ -0.06
ARPC1B-216ENST00000474880 CEMIPQ8WUJ3 1361 aa14.67□□□□□ -0.06
ARPC1B-216ENST00000474880 TTC5Q8N0Z6 440 aa14.66□□□□□ -0.06
ARPC1B-216ENST00000474880 VSIG10Q8N0Z9 540 aa14.66□□□□□ -0.06
ARPC1B-216ENST00000474880 SOS1Q07889 1333 aaPredicted RBP14.66□□□□□ -0.06
ARPC1B-216ENST00000474880 USP42Q9H9J4 1324 aaKnown RBP14.66□□□□□ -0.06
ARPC1B-216ENST00000474880 HTATSF1O43719 755 aaKnown RBP14.65□□□□□ -0.06
ARPC1B-216ENST00000474880 ZNF790Q6PG37 636 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms