RNA–Protein interactions for RNA: ENST00000474843.1

SRRM1-210, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-210ENST00000474843 SERTAD1Q9UHV2 236 aa9.34□□□□□ -0.91
SRRM1-210ENST00000474843 FAM196BA6NMK8 535 aa9.33□□□□□ -0.92
SRRM1-210ENST00000474843 TMEM229AB2RXF0 380 aa9.33□□□□□ -0.92
SRRM1-210ENST00000474843 CTSOP43234 321 aaPredicted RBP9.33□□□□□ -0.92
SRRM1-210ENST00000474843 CNKSR1Q969H4 720 aa9.33□□□□□ -0.92
SRRM1-210ENST00000474843 SFI1A8K8P3 1242 aa9.32□□□□□ -0.92
SRRM1-210ENST00000474843 DPYDQ12882 1025 aa9.32□□□□□ -0.92
SRRM1-210ENST00000474843 CLN3Q13286 438 aa9.32□□□□□ -0.92
SRRM1-210ENST00000474843 ESCO1Q5FWF5 840 aa9.32□□□□□ -0.92
SRRM1-210ENST00000474843 SIX5Q8N196 739 aa9.32□□□□□ -0.92
SRRM1-210ENST00000474843 LARGE2Q8N3Y3 721 aa9.32□□□□□ -0.92
SRRM1-210ENST00000474843 NLRP3Q96P20 1036 aa9.32□□□□□ -0.92
SRRM1-210ENST00000474843 ZNF358Q9NW07 568 aa9.32□□□□□ -0.92
SRRM1-210ENST00000474843 SOBPA7XYQ1 873 aa9.31□□□□□ -0.92
SRRM1-210ENST00000474843 C11orf95C9JLR9 678 aaPredicted RBP9.31□□□□□ -0.92
SRRM1-210ENST00000474843 LGR5O75473 907 aa9.31□□□□□ -0.92
SRRM1-210ENST00000474843 INHAP05111 366 aa9.31□□□□□ -0.92
SRRM1-210ENST00000474843 FOXD4L5Q5VV16 416 aaPredicted RBP9.31□□□□□ -0.92
SRRM1-210ENST00000474843 ANKMY2Q8IV38 441 aa9.31□□□□□ -0.92
SRRM1-210ENST00000474843 ZMIZ1Q9ULJ6 1067 aa9.31□□□□□ -0.92
SRRM1-210ENST00000474843 NOVA2Q9UNW9 492 aaKnown RBP9.31□□□□□ -0.92
SRRM1-210ENST00000474843 RBM19Q9Y4C8 960 aaKnown RBP9.31□□□□□ -0.92
SRRM1-210ENST00000474843 TLR1Q15399 786 aa9.3□□□□□ -0.92
SRRM1-210ENST00000474843 TREML4Q6UXN2 200 aa9.3□□□□□ -0.92
SRRM1-210ENST00000474843 STK32AQ8WU08 396 aa9.3□□□□□ -0.92
SRRM1-210ENST00000474843 ESYT1Q9BSJ8 1104 aa9.3□□□□□ -0.92
SRRM1-210ENST00000474843 FIGNL2A6NMB9 653 aa9.29□□□□□ -0.92
SRRM1-210ENST00000474843 TTLL8A6PVC2 850 aa9.29□□□□□ -0.92
SRRM1-210ENST00000474843 DKK1O94907 266 aa9.29□□□□□ -0.92
SRRM1-210ENST00000474843 ATG7O95352 703 aa9.28□□□□□ -0.92
SRRM1-210ENST00000474843 TSEN2Q8NCE0 465 aaKnown RBP9.28□□□□□ -0.92
SRRM1-210ENST00000474843 RNF217Q8TC41 542 aa9.28□□□□□ -0.92
SRRM1-210ENST00000474843 XAGE2Q96GT9 111 aa9.28□□□□□ -0.92
SRRM1-210ENST00000474843 ARXQ96QS3 562 aa9.28□□□□□ -0.92
SRRM1-210ENST00000474843 SOS2Q07890 1332 aaPredicted RBP9.28□□□□□ -0.92
SRRM1-210ENST00000474843 WASLO00401 505 aaPredicted RBP9.27□□□□□ -0.93
SRRM1-210ENST00000474843 PPP1R15AO75807 674 aaPredicted RBP9.27□□□□□ -0.93
SRRM1-210ENST00000474843 SEC13P55735 322 aa9.27□□□□□ -0.93
SRRM1-210ENST00000474843 CENPCQ03188 943 aa9.27□□□□□ -0.93
SRRM1-210ENST00000474843 SLC27A3Q5K4L6 730 aa9.27□□□□□ -0.93
SRRM1-210ENST00000474843 DNMT3LQ9UJW3 386 aa9.27□□□□□ -0.93
SRRM1-210ENST00000474843 HRH3Q9Y5N1 445 aa9.27□□□□□ -0.93
SRRM1-210ENST00000474843 SNRPBP14678 240 aaKnown RBP9.26□□□□□ -0.93
SRRM1-210ENST00000474843 TNS4Q8IZW8 715 aa9.26□□□□□ -0.93
SRRM1-210ENST00000474843 FAM200AQ8TCP9 573 aa9.26□□□□□ -0.93
SRRM1-210ENST00000474843 TRIM47Q96LD4 638 aa9.26□□□□□ -0.93
SRRM1-210ENST00000474843 FHDC1Q9C0D6 1143 aaPredicted RBP9.26□□□□□ -0.93
SRRM1-210ENST00000474843 SENP2Q9HC62 589 aa9.26□□□□□ -0.93
SRRM1-210ENST00000474843 USP3Q9Y6I4 520 aa9.26□□□□□ -0.93
SRRM1-210ENST00000474843 MAN1A2O60476 641 aa9.25□□□□□ -0.93
SRRM1-210ENST00000474843 RNF144AP50876 292 aaPredicted RBP9.25□□□□□ -0.93
SRRM1-210ENST00000474843 TMEM164Q5U3C3 297 aa9.25□□□□□ -0.93
SRRM1-210ENST00000474843 PRICKLE2Q7Z3G6 844 aa9.25□□□□□ -0.93
SRRM1-210ENST00000474843 ZSCAN10Q96SZ4 725 aaPredicted RBP9.25□□□□□ -0.93
SRRM1-210ENST00000474843 CARNS1A5YM72 827 aa9.24□□□□□ -0.93
SRRM1-210ENST00000474843 BACH1O14867 736 aa9.24□□□□□ -0.93
SRRM1-210ENST00000474843 RHOQP17081 205 aa9.24□□□□□ -0.93
SRRM1-210ENST00000474843 SMTNP53814 917 aa9.24□□□□□ -0.93
SRRM1-210ENST00000474843 TBCELQ5QJ74 424 aa9.24□□□□□ -0.93
SRRM1-210ENST00000474843 KIFC2Q96AC6 838 aa9.24□□□□□ -0.93
SRRM1-210ENST00000474843 A6NJY4 79 aa9.23□□□□□ -0.93
SRRM1-210ENST00000474843 GPC1P35052 558 aa9.23□□□□□ -0.93
SRRM1-210ENST00000474843 ELOAQ14241 798 aaKnown RBP9.23□□□□□ -0.93
SRRM1-210ENST00000474843 LYSMD3Q7Z3D4 306 aa9.23□□□□□ -0.93
SRRM1-210ENST00000474843 HINFPQ9BQA5 517 aa9.23□□□□□ -0.93
SRRM1-210ENST00000474843 WFS1O76024 890 aa9.22□□□□□ -0.93
SRRM1-210ENST00000474843 CSB-PGBD3P0DP91 1061 aa9.22□□□□□ -0.93
SRRM1-210ENST00000474843 EPHA4P54764 986 aa9.22□□□□□ -0.93
SRRM1-210ENST00000474843 TMEM214Q6NUQ4 689 aaKnown RBP9.22□□□□□ -0.93
SRRM1-210ENST00000474843 RETREG2Q8NC44 543 aa9.22□□□□□ -0.93
SRRM1-210ENST00000474843 GAS2L2Q8NHY3 880 aa9.22□□□□□ -0.93
SRRM1-210ENST00000474843 SLC4A9Q96Q91 983 aa9.22□□□□□ -0.93
SRRM1-210ENST00000474843 GRIP2Q9C0E4 1043 aa9.22□□□□□ -0.93
SRRM1-210ENST00000474843 TSPAN10Q9H1Z9 355 aaPredicted RBP9.22□□□□□ -0.93
SRRM1-210ENST00000474843 ACIN1Q9UKV3 1341 aaKnown RBP9.22□□□□□ -0.93
SRRM1-210ENST00000474843 PHKA2P46019 1235 aa9.21□□□□□ -0.94
SRRM1-210ENST00000474843 POU4F2Q12837 409 aa9.21□□□□□ -0.94
SRRM1-210ENST00000474843 MTFR1Q15390 333 aa9.21□□□□□ -0.94
SRRM1-210ENST00000474843 SLC9A9Q8IVB4 645 aa9.21□□□□□ -0.94
SRRM1-210ENST00000474843 M0R2N6 131 aa9.2□□□□□ -0.94
SRRM1-210ENST00000474843 GTF2E1P29083 439 aaPredicted RBP9.2□□□□□ -0.94
SRRM1-210ENST00000474843 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.2□□□□□ -0.942e-9■□□□□ 9.6
SRRM1-210ENST00000474843 SCHIP1Q9P0W5 487 aaPredicted RBP9.2□□□□□ -0.94
SRRM1-210ENST00000474843 C4orf17Q53FE4 359 aa9.19□□□□□ -0.94
SRRM1-210ENST00000474843 GNASQ5JWF2 1037 aa9.19□□□□□ -0.94
SRRM1-210ENST00000474843 CABP1Q9NZU7 370 aa9.19□□□□□ -0.94
SRRM1-210ENST00000474843 IQSEC3Q9UPP2 1182 aaPredicted RBP9.19□□□□□ -0.94
SRRM1-210ENST00000474843 PRMT3O60678 531 aa9.18□□□□□ -0.94
SRRM1-210ENST00000474843 PLA2G4AP47712 749 aa9.18□□□□□ -0.94
SRRM1-210ENST00000474843 FOXK2Q01167 660 aa9.18□□□□□ -0.94
SRRM1-210ENST00000474843 FAM69CQ0P6D2 419 aa9.18□□□□□ -0.94
SRRM1-210ENST00000474843 TAS1R3Q7RTX0 852 aa9.18□□□□□ -0.94
SRRM1-210ENST00000474843 PPARGC1BQ86YN6 1023 aaKnown RBP9.18□□□□□ -0.94
SRRM1-210ENST00000474843 NBPF15Q8N660 670 aa9.18□□□□□ -0.94
SRRM1-210ENST00000474843 RHBDD1Q8TEB9 315 aa9.18□□□□□ -0.94
SRRM1-210ENST00000474843 SCG3Q8WXD2 468 aaKnown RBP9.18□□□□□ -0.94
SRRM1-210ENST00000474843 PRIMPOLQ96LW4 560 aa9.18□□□□□ -0.94
SRRM1-210ENST00000474843 PARP3Q9Y6F1 533 aa9.18□□□□□ -0.94
SRRM1-210ENST00000474843 TMEM88BA6NKF7 163 aa9.17□□□□□ -0.94
SRRM1-210ENST00000474843 LCE2AQ5TA79 106 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms