RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 KIF24Q5T7B8 1368 aa17.37■□□□□ 0.37
TRIM13-207ENST00000474805 WDR90Q96KV7 1748 aa17.36■□□□□ 0.37
TRIM13-207ENST00000474805 TGFB2P61812 414 aa17.36■□□□□ 0.37
TRIM13-207ENST00000474805 PPM1GO15355 546 aaPredicted RBP17.35■□□□□ 0.37
TRIM13-207ENST00000474805 BRCA1P38398 1863 aaKnown RBP17.35■□□□□ 0.37
TRIM13-207ENST00000474805 HTRA3P83110 453 aa17.34■□□□□ 0.37
TRIM13-207ENST00000474805 TRAPPC3LQ5T215 181 aa17.34■□□□□ 0.37
TRIM13-207ENST00000474805 ATG3Q9NT62 314 aa17.34■□□□□ 0.37
TRIM13-207ENST00000474805 NCAPD2Q15021 1401 aa17.33■□□□□ 0.36
TRIM13-207ENST00000474805 FCHSD2O94868 740 aa17.33■□□□□ 0.36
TRIM13-207ENST00000474805 DPEP1P16444 411 aa17.33■□□□□ 0.36
TRIM13-207ENST00000474805 TMF1P82094 1093 aa17.33■□□□□ 0.36
TRIM13-207ENST00000474805 NLGN1Q8N2Q7 840 aa17.33■□□□□ 0.36
TRIM13-207ENST00000474805 PHKG2P15735 406 aa17.32■□□□□ 0.36
TRIM13-207ENST00000474805 IFNL2Q8IZJ0 200 aa17.32■□□□□ 0.36
TRIM13-207ENST00000474805 EYA1Q99502 592 aa17.32■□□□□ 0.36
TRIM13-207ENST00000474805 RTCBQ9Y3I0 505 aaKnown RBP17.32■□□□□ 0.36
TRIM13-207ENST00000474805 C10orf71Q711Q0 1435 aa17.31■□□□□ 0.36
TRIM13-207ENST00000474805 ARFGEF1Q9Y6D6 1849 aa17.31■□□□□ 0.36
TRIM13-207ENST00000474805 C4AP0C0L4 1744 aa17.31■□□□□ 0.36
TRIM13-207ENST00000474805 ARHGEF1Q92888 912 aaKnown RBP17.31■□□□□ 0.36
TRIM13-207ENST00000474805 CARD14Q9BXL6 1004 aa17.31■□□□□ 0.36
TRIM13-207ENST00000474805 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.31■□□□□ 0.362e-6■■□□□ 13.2
TRIM13-207ENST00000474805 COL13A1Q5TAT6 717 aaPredicted RBP17.3■□□□□ 0.36
TRIM13-207ENST00000474805 C9orf131Q5VYM1 1079 aa17.3■□□□□ 0.36
TRIM13-207ENST00000474805 C16orf71Q8IYS4 520 aaPredicted RBP17.3■□□□□ 0.36
TRIM13-207ENST00000474805 RBM46Q8TBY0 533 aaKnown RBP17.3■□□□□ 0.36
TRIM13-207ENST00000474805 SLC4A9Q96Q91 983 aa17.3■□□□□ 0.36
TRIM13-207ENST00000474805 RBM42Q9BTD8 480 aaKnown RBP17.3■□□□□ 0.36
TRIM13-207ENST00000474805 CCDC87Q9NVE4 849 aa17.3■□□□□ 0.36
TRIM13-207ENST00000474805 ANKRD26Q9UPS8 1709 aa17.3■□□□□ 0.36
TRIM13-207ENST00000474805 GYS1P13807 737 aa17.29■□□□□ 0.36
TRIM13-207ENST00000474805 PARP3Q9Y6F1 533 aa17.29■□□□□ 0.36
TRIM13-207ENST00000474805 MYH14Q7Z406 1995 aaKnown RBP17.29■□□□□ 0.36
TRIM13-207ENST00000474805 COL5A3P25940 1745 aaPredicted RBP17.29■□□□□ 0.36
TRIM13-207ENST00000474805 WASHC2AQ641Q2 1341 aa17.28■□□□□ 0.36
TRIM13-207ENST00000474805 KCNA3P22001 575 aa17.28■□□□□ 0.36
TRIM13-207ENST00000474805 KLRG1Q96E93 195 aa17.28■□□□□ 0.36
TRIM13-207ENST00000474805 KDRP35968 1356 aa17.28■□□□□ 0.36
TRIM13-207ENST00000474805 SBF1O95248 1867 aa17.27■□□□□ 0.36
TRIM13-207ENST00000474805 RFC4P35249 363 aa17.27■□□□□ 0.36
TRIM13-207ENST00000474805 ZNF831Q5JPB2 1677 aa17.26■□□□□ 0.35
TRIM13-207ENST00000474805 CAPN15O75808 1086 aa17.26■□□□□ 0.35
TRIM13-207ENST00000474805 RC3H1Q5TC82 1133 aaKnown RBP17.26■□□□□ 0.35
TRIM13-207ENST00000474805 JMYQ8N9B5 988 aa17.26■□□□□ 0.35
TRIM13-207ENST00000474805 KCPQ6ZWJ8 1503 aa17.26■□□□□ 0.35
TRIM13-207ENST00000474805 RPS6KA4O75676 772 aa17.25■□□□□ 0.35
TRIM13-207ENST00000474805 ADRA2BP18089 450 aa17.25■□□□□ 0.35
TRIM13-207ENST00000474805 FSTL1Q12841 308 aa17.25■□□□□ 0.35
TRIM13-207ENST00000474805 RRAGCQ9HB90 399 aa17.25■□□□□ 0.35
TRIM13-207ENST00000474805 PIM2Q9P1W9 311 aa17.25■□□□□ 0.35
TRIM13-207ENST00000474805 CDCA8Q53HL2 280 aa17.24■□□□□ 0.35
TRIM13-207ENST00000474805 PLEKHG2Q9H7P9 1386 aa17.24■□□□□ 0.35
TRIM13-207ENST00000474805 KDM2BQ8NHM5 1336 aa17.23■□□□□ 0.35
TRIM13-207ENST00000474805 CNTNAP4Q9C0A0 1308 aa17.23■□□□□ 0.35
TRIM13-207ENST00000474805 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
TRIM13-207ENST00000474805 DCAF5Q96JK2 942 aa17.23■□□□□ 0.35
TRIM13-207ENST00000474805 RNF181Q9P0P0 153 aa17.23■□□□□ 0.35
TRIM13-207ENST00000474805 POLKQ9UBT6 870 aa17.23■□□□□ 0.35
TRIM13-207ENST00000474805 EIF4A2Q14240 407 aaKnown RBP17.22■□□□□ 0.35
TRIM13-207ENST00000474805 DALRD3Q5D0E6 543 aaKnown RBP17.22■□□□□ 0.35
TRIM13-207ENST00000474805 SRP68Q9UHB9 627 aaKnown RBP17.22■□□□□ 0.35
TRIM13-207ENST00000474805 TNRC6CQ9HCJ0 1690 aaKnown RBP17.21■□□□□ 0.35
TRIM13-207ENST00000474805 CHRNA5P30532 468 aa17.2■□□□□ 0.34
TRIM13-207ENST00000474805 FKBP8Q14318 412 aa17.2■□□□□ 0.34
TRIM13-207ENST00000474805 TNS4Q8IZW8 715 aa17.2■□□□□ 0.34
TRIM13-207ENST00000474805 PTCD1O75127 700 aaKnown RBP17.19■□□□□ 0.34
TRIM13-207ENST00000474805 TNNT2P45379 298 aaPredicted RBP17.19■□□□□ 0.34
TRIM13-207ENST00000474805 CABP4P57796 275 aa17.19■□□□□ 0.34
TRIM13-207ENST00000474805 DDR1Q08345 913 aa17.19■□□□□ 0.34
TRIM13-207ENST00000474805 CCDC88AQ3V6T2 1871 aa17.18■□□□□ 0.34
TRIM13-207ENST00000474805 HSP90AB1P08238 724 aaKnown RBP17.18■□□□□ 0.34
TRIM13-207ENST00000474805 KDM6AO15550 1401 aaPredicted RBP17.17■□□□□ 0.34
TRIM13-207ENST00000474805 CRKLP46109 303 aaKnown RBP17.17■□□□□ 0.34
TRIM13-207ENST00000474805 PLEKHO1Q53GL0 409 aaPredicted RBP17.17■□□□□ 0.34
TRIM13-207ENST00000474805 SMC1BQ8NDV3 1235 aa17.17■□□□□ 0.34
TRIM13-207ENST00000474805 USP42Q9H9J4 1324 aaKnown RBP17.17■□□□□ 0.34
TRIM13-207ENST00000474805 PCNTO95613 3336 aa17.16■□□□□ 0.34
TRIM13-207ENST00000474805 ZNF530Q6P9A1 599 aaPredicted RBP17.16■□□□□ 0.34
TRIM13-207ENST00000474805 TJP1Q07157 1748 aa17.16■□□□□ 0.34
TRIM13-207ENST00000474805 PRELPP51888 382 aa17.15■□□□□ 0.34
TRIM13-207ENST00000474805 RASSF7Q02833 373 aa17.15■□□□□ 0.34
TRIM13-207ENST00000474805 NFATC2IPQ8NCF5 419 aa17.15■□□□□ 0.34
TRIM13-207ENST00000474805 AFDNP55196 1824 aaKnown RBP17.14■□□□□ 0.34
TRIM13-207ENST00000474805 POLRMTO00411 1230 aaKnown RBP17.14■□□□□ 0.33
TRIM13-207ENST00000474805 TM4SF1P30408 202 aa17.14■□□□□ 0.33
TRIM13-207ENST00000474805 MTHFSP49914 203 aa17.14■□□□□ 0.33
TRIM13-207ENST00000474805 ADAMTS7Q9UKP4 1686 aa17.13■□□□□ 0.33
TRIM13-207ENST00000474805 AMOTQ4VCS5 1084 aa17.12■□□□□ 0.33
TRIM13-207ENST00000474805 INTS5Q6P9B9 1019 aaKnown RBP17.12■□□□□ 0.33
TRIM13-207ENST00000474805 HSPA1AP0DMV8 641 aaKnown RBP17.11■□□□□ 0.33
TRIM13-207ENST00000474805 HSPA1BP0DMV9 641 aaKnown RBP17.11■□□□□ 0.33
TRIM13-207ENST00000474805 USPL1Q5W0Q7 1092 aa17.11■□□□□ 0.33
TRIM13-207ENST00000474805 POLR3GLQ9BT43 218 aa17.11■□□□□ 0.33
TRIM13-207ENST00000474805 SCN11AQ9UI33 1791 aa17.1■□□□□ 0.33
TRIM13-207ENST00000474805 GLTPD2A6NH11 291 aa17.1■□□□□ 0.33
TRIM13-207ENST00000474805 ZPR1O75312 459 aa17.1■□□□□ 0.33
TRIM13-207ENST00000474805 VEGFAP15692 232 aaPredicted RBP17.1■□□□□ 0.33
TRIM13-207ENST00000474805 C1orf141Q5JVX7 400 aa17.1■□□□□ 0.33
TRIM13-207ENST00000474805 AEBP1Q8IUX7 1158 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms