RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ATP6V1AP38606 617 aa19.35■□□□□ 0.69
CCDC78-209ENST00000474647 TNNT2P45379 298 aaPredicted RBP19.35■□□□□ 0.69
CCDC78-209ENST00000474647 IFNL2Q8IZJ0 200 aa19.35■□□□□ 0.69
CCDC78-209ENST00000474647 ASAP1Q9ULH1 1129 aa19.35■□□□□ 0.69
CCDC78-209ENST00000474647 ADCY9O60503 1353 aa19.34■□□□□ 0.69
CCDC78-209ENST00000474647 PHKG2P15735 406 aa19.34■□□□□ 0.69
CCDC78-209ENST00000474647 TRIM26Q12899 539 aaPredicted RBP19.34■□□□□ 0.69
CCDC78-209ENST00000474647 ITPK1Q13572 414 aa19.33■□□□□ 0.68
CCDC78-209ENST00000474647 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.33■□□□□ 0.68
CCDC78-209ENST00000474647 POLKQ9UBT6 870 aa19.33■□□□□ 0.68
CCDC78-209ENST00000474647 SCN11AQ9UI33 1791 aa19.32■□□□□ 0.68
CCDC78-209ENST00000474647 ARFGEF1Q9Y6D6 1849 aa19.32■□□□□ 0.68
CCDC78-209ENST00000474647 EIF4A2Q14240 407 aaKnown RBP19.31■□□□□ 0.68
CCDC78-209ENST00000474647 ATG3Q9NT62 314 aa19.3■□□□□ 0.68
CCDC78-209ENST00000474647 KDRP35968 1356 aa19.3■□□□□ 0.68
CCDC78-209ENST00000474647 TJP1Q07157 1748 aa19.29■□□□□ 0.68
CCDC78-209ENST00000474647 PXDNLA1KZ92 1463 aa19.28■□□□□ 0.68
CCDC78-209ENST00000474647 MMP10P09238 476 aa19.28■□□□□ 0.68
CCDC78-209ENST00000474647 RBM42Q9BTD8 480 aaKnown RBP19.28■□□□□ 0.68
CCDC78-209ENST00000474647 RTCBQ9Y3I0 505 aaKnown RBP19.26■□□□□ 0.67
CCDC78-209ENST00000474647 PLEKHG2Q9H7P9 1386 aa19.26■□□□□ 0.67
CCDC78-209ENST00000474647 TRAPPC3LQ5T215 181 aa19.25■□□□□ 0.67
CCDC78-209ENST00000474647 KDM6AO15550 1401 aaPredicted RBP19.25■□□□□ 0.67
CCDC78-209ENST00000474647 C10orf71Q711Q0 1435 aa19.24■□□□□ 0.67
CCDC78-209ENST00000474647 ERVV-2B6SEH9 535 aa19.23■□□□□ 0.67
CCDC78-209ENST00000474647 HSP90AB1P08238 724 aaKnown RBP19.23■□□□□ 0.67
CCDC78-209ENST00000474647 ZNF530Q6P9A1 599 aaPredicted RBP19.23■□□□□ 0.67
CCDC78-209ENST00000474647 SLC4A9Q96Q91 983 aa19.23■□□□□ 0.67
CCDC78-209ENST00000474647 TIMELESSQ9UNS1 1208 aa19.23■□□□□ 0.67
CCDC78-209ENST00000474647 HSPA6P17066 643 aa19.22■□□□□ 0.67
CCDC78-209ENST00000474647 PLEKHO1Q53GL0 409 aaPredicted RBP19.22■□□□□ 0.67
CCDC78-209ENST00000474647 DCAF5Q96JK2 942 aa19.22■□□□□ 0.67
CCDC78-209ENST00000474647 BCS1LQ9Y276 419 aa19.22■□□□□ 0.67
CCDC78-209ENST00000474647 SBF1O95248 1867 aa19.22■□□□□ 0.67
CCDC78-209ENST00000474647 AFDNP55196 1824 aaKnown RBP19.21■□□□□ 0.67
CCDC78-209ENST00000474647 RFC4P35249 363 aa19.21■□□□□ 0.67
CCDC78-209ENST00000474647 CABP4P57796 275 aa19.21■□□□□ 0.67
CCDC78-209ENST00000474647 PCGF6Q9BYE7 350 aa19.21■□□□□ 0.67
CCDC78-209ENST00000474647 CNTNAP4Q9C0A0 1308 aa19.21■□□□□ 0.67
CCDC78-209ENST00000474647 CCDC88AQ3V6T2 1871 aa19.2■□□□□ 0.66
CCDC78-209ENST00000474647 A0A0G2JLW4 131 aa19.2■□□□□ 0.66
CCDC78-209ENST00000474647 NLGN1Q8N2Q7 840 aa19.2■□□□□ 0.66
CCDC78-209ENST00000474647 ARHGEF1Q92888 912 aaKnown RBP19.2■□□□□ 0.66
CCDC78-209ENST00000474647 PANK3Q9H999 370 aa19.2■□□□□ 0.66
CCDC78-209ENST00000474647 CCDC87Q9NVE4 849 aa19.2■□□□□ 0.66
CCDC78-209ENST00000474647 ADRA2BP18089 450 aa19.19■□□□□ 0.66
CCDC78-209ENST00000474647 C1orf141Q5JVX7 400 aa19.19■□□□□ 0.66
CCDC78-209ENST00000474647 PARP3Q9Y6F1 533 aa19.19■□□□□ 0.66
CCDC78-209ENST00000474647 ADAMTS7Q9UKP4 1686 aa19.19■□□□□ 0.66
CCDC78-209ENST00000474647 WDR90Q96KV7 1748 aa19.18■□□□□ 0.66
CCDC78-209ENST00000474647 PTCD1O75127 700 aaKnown RBP19.18■□□□□ 0.66
CCDC78-209ENST00000474647 GYS1P13807 737 aa19.18■□□□□ 0.66
CCDC78-209ENST00000474647 TGFB2P61812 414 aa19.18■□□□□ 0.66
CCDC78-209ENST00000474647 AMOTQ4VCS5 1084 aa19.18■□□□□ 0.66
CCDC78-209ENST00000474647 RC3H1Q5TC82 1133 aaKnown RBP19.18■□□□□ 0.66
CCDC78-209ENST00000474647 AEBP1Q8IUX7 1158 aa19.18■□□□□ 0.66
CCDC78-209ENST00000474647 KIF3CO14782 793 aa19.17■□□□□ 0.66
CCDC78-209ENST00000474647 RPS6KA4O75676 772 aa19.17■□□□□ 0.66
CCDC78-209ENST00000474647 HSPA5P11021 654 aaKnown RBP19.17■□□□□ 0.66
CCDC78-209ENST00000474647 MTHFSP49914 203 aa19.17■□□□□ 0.66
CCDC78-209ENST00000474647 EIF4G2P78344 907 aaKnown RBP eCLIP19.17■□□□□ 0.66
CCDC78-209ENST00000474647 FCHSD2O94868 740 aa19.16■□□□□ 0.66
CCDC78-209ENST00000474647 DPEP1P16444 411 aa19.16■□□□□ 0.66
CCDC78-209ENST00000474647 IFFO2Q5TF58 517 aa19.16■□□□□ 0.66
CCDC78-209ENST00000474647 ARHGAP27Q6ZUM4 889 aa19.16■□□□□ 0.66
CCDC78-209ENST00000474647 MORC1Q86VD1 984 aa19.16■□□□□ 0.66
CCDC78-209ENST00000474647 CLSPNQ9HAW4 1339 aa19.16■□□□□ 0.66
CCDC78-209ENST00000474647 DLEC1Q9Y238 1755 aa19.16■□□□□ 0.66
CCDC78-209ENST00000474647 TNRC6CQ9HCJ0 1690 aaKnown RBP19.15■□□□□ 0.66
CCDC78-209ENST00000474647 CRKLP46109 303 aaKnown RBP19.14■□□□□ 0.65
CCDC78-209ENST00000474647 SULT6B1Q6IMI4 303 aa19.13■□□□□ 0.65
CCDC78-209ENST00000474647 NFATC2IPQ8NCF5 419 aa19.13■□□□□ 0.65
CCDC78-209ENST00000474647 SRP68Q9UHB9 627 aaKnown RBP19.13■□□□□ 0.65
CCDC78-209ENST00000474647 UBR2Q8IWV8 1755 aa19.13■□□□□ 0.65
CCDC78-209ENST00000474647 CACNA1SQ13698 1873 aa19.12■□□□□ 0.65
CCDC78-209ENST00000474647 TIAM2Q8IVF5 1701 aa19.11■□□□□ 0.65
CCDC78-209ENST00000474647 USP42Q9H9J4 1324 aaKnown RBP19.1■□□□□ 0.65
CCDC78-209ENST00000474647 FKBP8Q14318 412 aa19.1■□□□□ 0.65
CCDC78-209ENST00000474647 NRXN2Q9P2S2 1712 aa19.09■□□□□ 0.65
CCDC78-209ENST00000474647 NMRK2Q9NPI5 230 aa19.09■□□□□ 0.65
CCDC78-209ENST00000474647 KNSTRNQ9Y448 316 aa19.09■□□□□ 0.65
CCDC78-209ENST00000474647 MRC1P22897 1456 aa19.09■□□□□ 0.65
CCDC78-209ENST00000474647 DDR1Q08345 913 aa19.08■□□□□ 0.64
CCDC78-209ENST00000474647 PIM2Q9P1W9 311 aa19.08■□□□□ 0.64
CCDC78-209ENST00000474647 KCPQ6ZWJ8 1503 aa19.07■□□□□ 0.64
CCDC78-209ENST00000474647 TOMM70O94826 608 aa19.07■□□□□ 0.64
CCDC78-209ENST00000474647 KCNA3P22001 575 aa19.07■□□□□ 0.64
CCDC78-209ENST00000474647 C9orf131Q5VYM1 1079 aa19.07■□□□□ 0.64
CCDC78-209ENST00000474647 SIPA1L3O60292 1781 aaPredicted RBP19.06■□□□□ 0.64
CCDC78-209ENST00000474647 IL13P35225 146 aa19.06■□□□□ 0.64
CCDC78-209ENST00000474647 APLP1P51693 650 aa19.06■□□□□ 0.64
CCDC78-209ENST00000474647 DALRD3Q5D0E6 543 aaKnown RBP19.06■□□□□ 0.64
CCDC78-209ENST00000474647 ZPR1O75312 459 aa19.05■□□□□ 0.64
CCDC78-209ENST00000474647 CHRNA5P30532 468 aa19.05■□□□□ 0.64
CCDC78-209ENST00000474647 AKAP4Q5JQC9 854 aa19.05■□□□□ 0.64
CCDC78-209ENST00000474647 DNAJC10Q8IXB1 793 aa19.05■□□□□ 0.64
CCDC78-209ENST00000474647 C16orf71Q8IYS4 520 aaPredicted RBP19.05■□□□□ 0.64
CCDC78-209ENST00000474647 SLC52A2Q9HAB3 445 aa19.05■□□□□ 0.64
CCDC78-209ENST00000474647 ANKRD31Q8N7Z5 1873 aa19.05■□□□□ 0.64
CCDC78-209ENST00000474647 USPL1Q5W0Q7 1092 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms