RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 EYA1Q99502 592 aa12.1□□□□□ -0.47
TNFRSF9-202ENST00000474475 SYT17Q9BSW7 474 aa12.1□□□□□ -0.47
TNFRSF9-202ENST00000474475 PANK3Q9H999 370 aa12.1□□□□□ -0.47
TNFRSF9-202ENST00000474475 ITGB4P16144 1822 aa12.09□□□□□ -0.47
TNFRSF9-202ENST00000474475 ARXQ96QS3 562 aa12.09□□□□□ -0.47
TNFRSF9-202ENST00000474475 TFCP2L1Q9NZI6 479 aa12.09□□□□□ -0.47
TNFRSF9-202ENST00000474475 C5P01031 1676 aa12.09□□□□□ -0.47
TNFRSF9-202ENST00000474475 EIF4A2Q14240 407 aaKnown RBP12.08□□□□□ -0.48
TNFRSF9-202ENST00000474475 MPRIPQ6WCQ1 1025 aa12.08□□□□□ -0.48
TNFRSF9-202ENST00000474475 SLC16A10Q8TF71 515 aa12.08□□□□□ -0.48
TNFRSF9-202ENST00000474475 PALLDQ8WX93 1383 aa12.07□□□□□ -0.48
TNFRSF9-202ENST00000474475 FXR2P51116 673 aaKnown RBP eCLIP12.07□□□□□ -0.48
TNFRSF9-202ENST00000474475 NKX1-1Q15270 411 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF9-202ENST00000474475 SPG7Q9UQ90 795 aa12.07□□□□□ -0.48
TNFRSF9-202ENST00000474475 TAF1LQ8IZX4 1826 aa12.07□□□□□ -0.48
TNFRSF9-202ENST00000474475 MAP3K5Q99683 1374 aa12.06□□□□□ -0.48
TNFRSF9-202ENST00000474475 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.06□□□□□ -0.48
TNFRSF9-202ENST00000474475 PRKAR2AP13861 404 aaKnown RBP12.05□□□□□ -0.48
TNFRSF9-202ENST00000474475 COL23A1Q86Y22 540 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF9-202ENST00000474475 PIGBQ92521 554 aa12.05□□□□□ -0.48
TNFRSF9-202ENST00000474475 IGSF1Q8N6C5 1336 aa12.05□□□□□ -0.48
TNFRSF9-202ENST00000474475 C4BP0C0L5 1744 aa12.04□□□□□ -0.48
TNFRSF9-202ENST00000474475 PHKG2P15735 406 aa12.04□□□□□ -0.48
TNFRSF9-202ENST00000474475 CHADLQ6NUI6 762 aa12.04□□□□□ -0.48
TNFRSF9-202ENST00000474475 POLD1P28340 1107 aa12.03□□□□□ -0.48
TNFRSF9-202ENST00000474475 MORC1Q86VD1 984 aa12.03□□□□□ -0.48
TNFRSF9-202ENST00000474475 IFNL2Q8IZJ0 200 aa12.03□□□□□ -0.48
TNFRSF9-202ENST00000474475 SMARCC1Q92922 1105 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF9-202ENST00000474475 PIP4P2Q8N4L2 257 aa12.02□□□□□ -0.49
TNFRSF9-202ENST00000474475 KIF7Q2M1P5 1343 aa12.02□□□□□ -0.49
TNFRSF9-202ENST00000474475 PLEKHG2Q9H7P9 1386 aa12.02□□□□□ -0.49
TNFRSF9-202ENST00000474475 MSL1Q68DK7 614 aa12.01□□□□□ -0.49
TNFRSF9-202ENST00000474475 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
TNFRSF9-202ENST00000474475 TMOD3Q9NYL9 352 aa12.01□□□□□ -0.49
TNFRSF9-202ENST00000474475 ASAP1Q9ULH1 1129 aa12.01□□□□□ -0.49
TNFRSF9-202ENST00000474475 KNSTRNQ9Y448 316 aa12.01□□□□□ -0.49
TNFRSF9-202ENST00000474475 UBR3Q6ZT12 1888 aa12□□□□□ -0.49
TNFRSF9-202ENST00000474475 LOC102724428A0A0B4J2F2 783 aa12□□□□□ -0.49
TNFRSF9-202ENST00000474475 MNX1P50219 401 aaPredicted RBP12□□□□□ -0.49
TNFRSF9-202ENST00000474475 SIK1P57059 783 aa12□□□□□ -0.49
TNFRSF9-202ENST00000474475 SMIM5Q71RC9 77 aa12□□□□□ -0.49
TNFRSF9-202ENST00000474475 AEBP1Q8IUX7 1158 aa12□□□□□ -0.49
TNFRSF9-202ENST00000474475 NLGN2Q8NFZ4 835 aa12□□□□□ -0.49
TNFRSF9-202ENST00000474475 HMGB2P26583 209 aaKnown RBP11.99□□□□□ -0.49
TNFRSF9-202ENST00000474475 ITPK1Q13572 414 aa11.99□□□□□ -0.49
TNFRSF9-202ENST00000474475 LINC00116Q8NCU8 138 aa11.99□□□□□ -0.49
TNFRSF9-202ENST00000474475 FLAD1Q8NFF5 587 aa11.99□□□□□ -0.49
TNFRSF9-202ENST00000474475 AK7Q96M32 723 aa11.99□□□□□ -0.49
TNFRSF9-202ENST00000474475 ATG3Q9NT62 314 aa11.99□□□□□ -0.49
TNFRSF9-202ENST00000474475 FARP1Q9Y4F1 1045 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF9-202ENST00000474475 KDM6AO15550 1401 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF9-202ENST00000474475 PLEKHO1Q53GL0 409 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF9-202ENST00000474475 CIZ1Q9ULV3 898 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF9-202ENST00000474475 KDRP35968 1356 aa11.97□□□□□ -0.49
TNFRSF9-202ENST00000474475 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.97□□□□□ -0.49
TNFRSF9-202ENST00000474475 ERVV-2B6SEH9 535 aa11.97□□□□□ -0.49
TNFRSF9-202ENST00000474475 PER1O15534 1290 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF9-202ENST00000474475 PHF14O94880 888 aa11.97□□□□□ -0.49
TNFRSF9-202ENST00000474475 IL13P35225 146 aa11.97□□□□□ -0.49
TNFRSF9-202ENST00000474475 ATP6V1AP38606 617 aa11.97□□□□□ -0.49
TNFRSF9-202ENST00000474475 GSE1Q14687 1217 aa11.97□□□□□ -0.49
TNFRSF9-202ENST00000474475 GPR162Q16538 588 aa11.97□□□□□ -0.49
TNFRSF9-202ENST00000474475 SULT6B1Q6IMI4 303 aa11.97□□□□□ -0.49
TNFRSF9-202ENST00000474475 ZNF530Q6P9A1 599 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF9-202ENST00000474475 DCAF5Q96JK2 942 aa11.97□□□□□ -0.49
TNFRSF9-202ENST00000474475 CHD4Q14839 1912 aa11.97□□□□□ -0.49
TNFRSF9-202ENST00000474475 ZNF831Q5JPB2 1677 aa11.97□□□□□ -0.49
TNFRSF9-202ENST00000474475 HSP90AB1P08238 724 aaKnown RBP11.96□□□□□ -0.49
TNFRSF9-202ENST00000474475 AMOTQ4VCS5 1084 aa11.96□□□□□ -0.49
TNFRSF9-202ENST00000474475 FAM212AQ96EL1 285 aa11.96□□□□□ -0.49
TNFRSF9-202ENST00000474475 SLC4A9Q96Q91 983 aa11.96□□□□□ -0.49
TNFRSF9-202ENST00000474475 SSFA2P28290 1259 aa11.95□□□□□ -0.5
TNFRSF9-202ENST00000474475 NUBP1P53384 320 aa11.95□□□□□ -0.5
TNFRSF9-202ENST00000474475 PELP1Q8IZL8 1130 aaKnown RBP11.95□□□□□ -0.5
TNFRSF9-202ENST00000474475 ZNF784Q8NCA9 323 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF9-202ENST00000474475 COL5A3P25940 1745 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF9-202ENST00000474475 SENP3-EIF4A1A0A087X0R7 540 aa11.94□□□□□ -0.5
TNFRSF9-202ENST00000474475 GNPATO15228 680 aa11.94□□□□□ -0.5
TNFRSF9-202ENST00000474475 MTHFSP49914 203 aa11.94□□□□□ -0.5
TNFRSF9-202ENST00000474475 YBX3P16989 372 aaKnown RBP eCLIP11.93□□□□□ -0.5
TNFRSF9-202ENST00000474475 CABP4P57796 275 aa11.93□□□□□ -0.5
TNFRSF9-202ENST00000474475 C1orf141Q5JVX7 400 aa11.93□□□□□ -0.5
TNFRSF9-202ENST00000474475 CC2D1BQ5T0F9 858 aaKnown RBP11.93□□□□□ -0.5
TNFRSF9-202ENST00000474475 DCAF8Q5TAQ9 597 aa11.93□□□□□ -0.5
TNFRSF9-202ENST00000474475 CD2APQ9Y5K6 639 aa11.93□□□□□ -0.5
TNFRSF9-202ENST00000474475 SCN11AQ9UI33 1791 aa11.92□□□□□ -0.5
TNFRSF9-202ENST00000474475 HMOX1P09601 288 aa11.91□□□□□ -0.5
TNFRSF9-202ENST00000474475 NFATC2IPQ8NCF5 419 aa11.91□□□□□ -0.5
TNFRSF9-202ENST00000474475 TJP1Q07157 1748 aa11.91□□□□□ -0.5
TNFRSF9-202ENST00000474475 CICQ96RK0 1608 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF9-202ENST00000474475 IFFO2Q5TF58 517 aa11.9□□□□□ -0.5
TNFRSF9-202ENST00000474475 RTCBQ9Y3I0 505 aaKnown RBP11.9□□□□□ -0.5
TNFRSF9-202ENST00000474475 NPC1L1Q9UHC9 1359 aa11.9□□□□□ -0.5
TNFRSF9-202ENST00000474475 COL3A1P02461 1466 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF9-202ENST00000474475 CNTNAP4Q9C0A0 1308 aa11.89□□□□□ -0.51
TNFRSF9-202ENST00000474475 MYH14Q7Z406 1995 aaKnown RBP11.89□□□□□ -0.51
TNFRSF9-202ENST00000474475 GRIN3BO60391 1043 aa11.89□□□□□ -0.51
TNFRSF9-202ENST00000474475 DIAPH1O60610 1272 aaKnown RBP11.89□□□□□ -0.51
TNFRSF9-202ENST00000474475 PTCD1O75127 700 aaKnown RBP11.89□□□□□ -0.51
TNFRSF9-202ENST00000474475 ECM2O94769 699 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms