RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 ITGB4P16144 1822 aa14.4□□□□□ -0.1
RNF220-210ENST00000474394 ZNF316A6NFI3 1004 aaPredicted RBP14.39□□□□□ -0.11
RNF220-210ENST00000474394 U2AF1L5P0DN76 240 aaPredicted RBP14.39□□□□□ -0.11
RNF220-210ENST00000474394 YBX3P16989 372 aaKnown RBP eCLIP14.39□□□□□ -0.11
RNF220-210ENST00000474394 HMGB2P26583 209 aaKnown RBP14.39□□□□□ -0.11
RNF220-210ENST00000474394 U2AF1Q01081 240 aaKnown RBP eCLIP14.39□□□□□ -0.11
RNF220-210ENST00000474394 AKAP4Q5JQC9 854 aa14.39□□□□□ -0.11
RNF220-210ENST00000474394 LRRC4BQ9NT99 713 aa14.39□□□□□ -0.11
RNF220-210ENST00000474394 PAPPAQ13219 1627 aa14.39□□□□□ -0.11
RNF220-210ENST00000474394 COL24A1Q17RW2 1714 aa14.38□□□□□ -0.11
RNF220-210ENST00000474394 PALLDQ8WX93 1383 aa14.38□□□□□ -0.11
RNF220-210ENST00000474394 CABP4P57796 275 aa14.38□□□□□ -0.11
RNF220-210ENST00000474394 ZNF827Q17R98 1081 aa14.38□□□□□ -0.11
RNF220-210ENST00000474394 MTHFSDQ2M296 383 aaKnown RBP14.38□□□□□ -0.11
RNF220-210ENST00000474394 CCNL1Q9UK58 526 aaPredicted RBP14.38□□□□□ -0.11
RNF220-210ENST00000474394 LY75O60449 1722 aa14.38□□□□□ -0.11
RNF220-210ENST00000474394 RSPH6AQ9H0K4 717 aa14.37□□□□□ -0.11
RNF220-210ENST00000474394 KDM6AO15550 1401 aaPredicted RBP14.37□□□□□ -0.11
RNF220-210ENST00000474394 FCHSD2O94868 740 aa14.36□□□□□ -0.11
RNF220-210ENST00000474394 PRKAR2BP31323 418 aa14.36□□□□□ -0.11
RNF220-210ENST00000474394 KCNQ4P56696 695 aa14.36□□□□□ -0.11
RNF220-210ENST00000474394 GAS2L2Q8NHY3 880 aa14.36□□□□□ -0.11
RNF220-210ENST00000474394 MYBBP1AQ9BQG0 1328 aaKnown RBP14.36□□□□□ -0.11
RNF220-210ENST00000474394 QSER1Q2KHR3 1735 aa14.35□□□□□ -0.11
RNF220-210ENST00000474394 ZNF526Q8TF50 670 aaPredicted RBP14.35□□□□□ -0.11
RNF220-210ENST00000474394 ASAP1Q9ULH1 1129 aa14.35□□□□□ -0.11
RNF220-210ENST00000474394 RNMTO43148 476 aaKnown RBP14.34□□□□□ -0.11
RNF220-210ENST00000474394 APLP1P51693 650 aa14.34□□□□□ -0.11
RNF220-210ENST00000474394 SCN11AQ9UI33 1791 aa14.33□□□□□ -0.12
RNF220-210ENST00000474394 LOC102724428A0A0B4J2F2 783 aa14.33□□□□□ -0.12
RNF220-210ENST00000474394 NEFMP07197 916 aa14.33□□□□□ -0.12
RNF220-210ENST00000474394 SIK1P57059 783 aa14.33□□□□□ -0.12
RNF220-210ENST00000474394 DNAJC5GQ8N7S2 189 aa14.33□□□□□ -0.12
RNF220-210ENST00000474394 NFATC2IPQ8NCF5 419 aa14.33□□□□□ -0.12
RNF220-210ENST00000474394 AKT1S1Q96B36 256 aa14.33□□□□□ -0.12
RNF220-210ENST00000474394 PRKRIP1Q9H875 184 aaPredicted RBP14.33□□□□□ -0.12
RNF220-210ENST00000474394 LGR6Q9HBX8 967 aa14.33□□□□□ -0.12
RNF220-210ENST00000474394 ATG3Q9NT62 314 aa14.33□□□□□ -0.12
RNF220-210ENST00000474394 PCNTO95613 3336 aa14.32□□□□□ -0.12
RNF220-210ENST00000474394 GNAT3A8MTJ3 354 aa14.32□□□□□ -0.12
RNF220-210ENST00000474394 CAPN15O75808 1086 aa14.32□□□□□ -0.12
RNF220-210ENST00000474394 PHACTR3Q96KR7 559 aa14.32□□□□□ -0.12
RNF220-210ENST00000474394 SLC52A2Q9HAB3 445 aa14.32□□□□□ -0.12
RNF220-210ENST00000474394 TFCP2L1Q9NZI6 479 aa14.32□□□□□ -0.12
RNF220-210ENST00000474394 PNNQ9H307 717 aaKnown RBP14.31□□□□□ -0.12
RNF220-210ENST00000474394 PNPLA7Q6ZV29 1317 aa14.31□□□□□ -0.12
RNF220-210ENST00000474394 ADCY9O60503 1353 aa14.31□□□□□ -0.12
RNF220-210ENST00000474394 ATP6V1AP38606 617 aa14.3□□□□□ -0.12
RNF220-210ENST00000474394 COL13A1Q5TAT6 717 aaPredicted RBP14.3□□□□□ -0.12
RNF220-210ENST00000474394 RBM42Q9BTD8 480 aaKnown RBP14.3□□□□□ -0.12
RNF220-210ENST00000474394 MRC1P22897 1456 aa14.29□□□□□ -0.12
RNF220-210ENST00000474394 C5P01031 1676 aa14.29□□□□□ -0.12
RNF220-210ENST00000474394 KIF3CO14782 793 aa14.28□□□□□ -0.12
RNF220-210ENST00000474394 PRELPP51888 382 aa14.28□□□□□ -0.12
RNF220-210ENST00000474394 TEFQ10587 303 aa14.28□□□□□ -0.12
RNF220-210ENST00000474394 VIRMAQ69YN4 1812 aaKnown RBP14.28□□□□□ -0.12
RNF220-210ENST00000474394 TAF1LQ8IZX4 1826 aa14.28□□□□□ -0.12
RNF220-210ENST00000474394 IL17REQ8NFR9 667 aa14.28□□□□□ -0.12
RNF220-210ENST00000474394 RTF1Q92541 710 aaKnown RBP14.28□□□□□ -0.12
RNF220-210ENST00000474394 AK7Q96M32 723 aa14.28□□□□□ -0.12
RNF220-210ENST00000474394 TUBGCP6Q96RT7 1819 aa14.28□□□□□ -0.12
RNF220-210ENST00000474394 ADAMTS7Q9UKP4 1686 aa14.28□□□□□ -0.12
RNF220-210ENST00000474394 MAPK8IP3Q9UPT6 1336 aa14.27□□□□□ -0.12
RNF220-210ENST00000474394 PTCD1O75127 700 aaKnown RBP14.27□□□□□ -0.13
RNF220-210ENST00000474394 ITPK1Q13572 414 aa14.27□□□□□ -0.13
RNF220-210ENST00000474394 LINC00116Q8NCU8 138 aa14.27□□□□□ -0.13
RNF220-210ENST00000474394 HTATSF1O43719 755 aaKnown RBP14.26□□□□□ -0.13
RNF220-210ENST00000474394 WDR43Q15061 677 aaKnown RBP eCLIP14.26□□□□□ -0.13
RNF220-210ENST00000474394 FLAD1Q8NFF5 587 aa14.26□□□□□ -0.13
RNF220-210ENST00000474394 PLEKHF1Q96S99 279 aa14.26□□□□□ -0.13
RNF220-210ENST00000474394 C4BP0C0L5 1744 aa14.26□□□□□ -0.13
RNF220-210ENST00000474394 CEMIPQ8WUJ3 1361 aa14.25□□□□□ -0.13
RNF220-210ENST00000474394 MSH5O43196 834 aa14.25□□□□□ -0.13
RNF220-210ENST00000474394 SLC39A6Q13433 755 aa14.25□□□□□ -0.13
RNF220-210ENST00000474394 SLC4A9Q96Q91 983 aa14.25□□□□□ -0.13
RNF220-210ENST00000474394 ZNF831Q5JPB2 1677 aa14.24□□□□□ -0.13
RNF220-210ENST00000474394 ANP32CO43423 234 aa14.24□□□□□ -0.13
RNF220-210ENST00000474394 TNS4Q8IZW8 715 aa14.24□□□□□ -0.13
RNF220-210ENST00000474394 TTC5Q8N0Z6 440 aa14.24□□□□□ -0.13
RNF220-210ENST00000474394 CD2APQ9Y5K6 639 aa14.24□□□□□ -0.13
RNF220-210ENST00000474394 GNPATO15228 680 aa14.23□□□□□ -0.13
RNF220-210ENST00000474394 NFE2L2Q16236 605 aa14.23□□□□□ -0.13
RNF220-210ENST00000474394 RC3H1Q5TC82 1133 aaKnown RBP14.23□□□□□ -0.13
RNF220-210ENST00000474394 COL23A1Q86Y22 540 aaPredicted RBP14.23□□□□□ -0.13
RNF220-210ENST00000474394 CNTNAP4Q9C0A0 1308 aa14.22□□□□□ -0.13
RNF220-210ENST00000474394 TOMM70O94826 608 aa14.22□□□□□ -0.13
RNF220-210ENST00000474394 SSFA2P28290 1259 aa14.22□□□□□ -0.13
RNF220-210ENST00000474394 MCM10Q7L590 875 aa14.22□□□□□ -0.13
RNF220-210ENST00000474394 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.21□□□□□ -0.13
RNF220-210ENST00000474394 BTBD11A6QL63 1104 aa14.21□□□□□ -0.13
RNF220-210ENST00000474394 PHF14O94880 888 aa14.21□□□□□ -0.13
RNF220-210ENST00000474394 DCTN1Q14203 1278 aa14.21□□□□□ -0.13
RNF220-210ENST00000474394 ZNF790Q6PG37 636 aa14.21□□□□□ -0.13
RNF220-210ENST00000474394 VSIG10Q8N0Z9 540 aa14.21□□□□□ -0.13
RNF220-210ENST00000474394 RTCBQ9Y3I0 505 aaKnown RBP14.21□□□□□ -0.13
RNF220-210ENST00000474394 UBR3Q6ZT12 1888 aa14.21□□□□□ -0.14
RNF220-210ENST00000474394 DNAJC10Q8IXB1 793 aa14.2□□□□□ -0.14
RNF220-210ENST00000474394 JMYQ8N9B5 988 aa14.2□□□□□ -0.14
RNF220-210ENST00000474394 ADAMTS8Q9UP79 889 aa14.2□□□□□ -0.14
RNF220-210ENST00000474394 KCPQ6ZWJ8 1503 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms