RNA–Protein interactions for RNA: ENST00000474251.5

PDE6B-208, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-208ENST00000474251 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.77■■□□□ 1.56
PDE6B-208ENST00000474251 SSFA2P28290 1259 aa24.77■■□□□ 1.56
PDE6B-208ENST00000474251 ITPK1Q13572 414 aa24.77■■□□□ 1.56
PDE6B-208ENST00000474251 KDM6AO15550 1401 aaPredicted RBP24.77■■□□□ 1.56
PDE6B-208ENST00000474251 KIAA1551Q9HCM1 1747 aa24.76■■□□□ 1.55
PDE6B-208ENST00000474251 CCER1Q8TC90 406 aaPredicted RBP24.76■■□□□ 1.55
PDE6B-208ENST00000474251 ATG3Q9NT62 314 aa24.76■■□□□ 1.55
PDE6B-208ENST00000474251 CD2APQ9Y5K6 639 aa24.76■■□□□ 1.55
PDE6B-208ENST00000474251 CICQ96RK0 1608 aaPredicted RBP24.75■■□□□ 1.55
PDE6B-208ENST00000474251 ATP6V1AP38606 617 aa24.74■■□□□ 1.55
PDE6B-208ENST00000474251 N4BP2Q86UW6 1770 aaPredicted RBP24.73■■□□□ 1.55
PDE6B-208ENST00000474251 TJP1Q07157 1748 aa24.73■■□□□ 1.55
PDE6B-208ENST00000474251 GRIN3BO60391 1043 aa24.73■■□□□ 1.55
PDE6B-208ENST00000474251 GNPATO15228 680 aa24.72■■□□□ 1.55
PDE6B-208ENST00000474251 MORC1Q86VD1 984 aa24.72■■□□□ 1.55
PDE6B-208ENST00000474251 BRCA1P38398 1863 aaKnown RBP24.71■■□□□ 1.55
PDE6B-208ENST00000474251 ERVV-2B6SEH9 535 aa24.71■■□□□ 1.55
PDE6B-208ENST00000474251 HSP90AB1P08238 724 aaKnown RBP24.71■■□□□ 1.55
PDE6B-208ENST00000474251 PLEKHO1Q53GL0 409 aaPredicted RBP24.71■■□□□ 1.55
PDE6B-208ENST00000474251 DCAF5Q96JK2 942 aa24.71■■□□□ 1.55
PDE6B-208ENST00000474251 ZNF530Q6P9A1 599 aaPredicted RBP24.7■■□□□ 1.54
PDE6B-208ENST00000474251 AEBP1Q8IUX7 1158 aa24.7■■□□□ 1.54
PDE6B-208ENST00000474251 SLC4A9Q96Q91 983 aa24.69■■□□□ 1.54
PDE6B-208ENST00000474251 AMOTQ4VCS5 1084 aa24.68■■□□□ 1.54
PDE6B-208ENST00000474251 KNSTRNQ9Y448 316 aa24.68■■□□□ 1.54
PDE6B-208ENST00000474251 C1QTNF8P60827 252 aa24.67■■□□□ 1.54
PDE6B-208ENST00000474251 AMER1Q5JTC6 1135 aaPredicted RBP24.65■■□□□ 1.54
PDE6B-208ENST00000474251 RBM42Q9BTD8 480 aaKnown RBP24.65■■□□□ 1.54
PDE6B-208ENST00000474251 KIF7Q2M1P5 1343 aa24.64■■□□□ 1.54
PDE6B-208ENST00000474251 CNTNAP4Q9C0A0 1308 aa24.64■■□□□ 1.54
PDE6B-208ENST00000474251 ADAMTS7Q9UKP4 1686 aa24.64■■□□□ 1.53
PDE6B-208ENST00000474251 IL13P35225 146 aa24.63■■□□□ 1.53
PDE6B-208ENST00000474251 SULT6B1Q6IMI4 303 aa24.63■■□□□ 1.53
PDE6B-208ENST00000474251 RTCBQ9Y3I0 505 aaKnown RBP24.63■■□□□ 1.53
PDE6B-208ENST00000474251 GIGYF1O75420 1035 aaPredicted RBP24.62■■□□□ 1.53
PDE6B-208ENST00000474251 CABP4P57796 275 aa24.62■■□□□ 1.53
PDE6B-208ENST00000474251 C1orf141Q5JVX7 400 aa24.62■■□□□ 1.53
PDE6B-208ENST00000474251 ADCY9O60503 1353 aa24.62■■□□□ 1.53
PDE6B-208ENST00000474251 ATP10DQ9P241 1426 aa24.61■■□□□ 1.53
PDE6B-208ENST00000474251 ARFGEF1Q9Y6D6 1849 aa24.61■■□□□ 1.53
PDE6B-208ENST00000474251 MTHFSP49914 203 aa24.61■■□□□ 1.53
PDE6B-208ENST00000474251 RC3H1Q5TC82 1133 aaKnown RBP24.61■■□□□ 1.53
PDE6B-208ENST00000474251 MRC1P22897 1456 aa24.61■■□□□ 1.53
PDE6B-208ENST00000474251 PXDNLA1KZ92 1463 aa24.6■■□□□ 1.53
PDE6B-208ENST00000474251 MMP10P09238 476 aa24.6■■□□□ 1.53
PDE6B-208ENST00000474251 C10orf71Q711Q0 1435 aa24.6■■□□□ 1.53
PDE6B-208ENST00000474251 ADRA2BP18089 450 aa24.59■■□□□ 1.53
PDE6B-208ENST00000474251 TRAPPC3LQ5T215 181 aa24.59■■□□□ 1.53
PDE6B-208ENST00000474251 UBR2Q8IWV8 1755 aa24.59■■□□□ 1.53
PDE6B-208ENST00000474251 SENP3-EIF4A1A0A087X0R7 540 aa24.58■■□□□ 1.53
PDE6B-208ENST00000474251 WWC3Q9ULE0 1092 aa24.58■■□□□ 1.53
PDE6B-208ENST00000474251 RPS6KA4O75676 772 aa24.57■■□□□ 1.52
PDE6B-208ENST00000474251 ARHGEF1Q92888 912 aaKnown RBP24.57■■□□□ 1.52
PDE6B-208ENST00000474251 NFATC2IPQ8NCF5 419 aa24.56■■□□□ 1.52
PDE6B-208ENST00000474251 PTCD1O75127 700 aaKnown RBP24.55■■□□□ 1.52
PDE6B-208ENST00000474251 NLGN1Q8N2Q7 840 aa24.55■■□□□ 1.52
PDE6B-208ENST00000474251 AFDNP55196 1824 aaKnown RBP24.55■■□□□ 1.52
PDE6B-208ENST00000474251 GYS1P13807 737 aa24.54■■□□□ 1.52
PDE6B-208ENST00000474251 SIPA1L3O60292 1781 aaPredicted RBP24.54■■□□□ 1.52
PDE6B-208ENST00000474251 PER1O15534 1290 aaPredicted RBP24.53■■□□□ 1.52
PDE6B-208ENST00000474251 CRKLP46109 303 aaKnown RBP24.53■■□□□ 1.52
PDE6B-208ENST00000474251 AKAP4Q5JQC9 854 aa24.53■■□□□ 1.52
PDE6B-208ENST00000474251 COL3A1P02461 1466 aaPredicted RBP24.52■■□□□ 1.52
PDE6B-208ENST00000474251 KCPQ6ZWJ8 1503 aa24.52■■□□□ 1.52
PDE6B-208ENST00000474251 RFC4P35249 363 aa24.52■■□□□ 1.52
PDE6B-208ENST00000474251 HMOX1P09601 288 aa24.49■■□□□ 1.51
PDE6B-208ENST00000474251 TGFB2P61812 414 aa24.49■■□□□ 1.51
PDE6B-208ENST00000474251 SLC52A2Q9HAB3 445 aa24.49■■□□□ 1.51
PDE6B-208ENST00000474251 CC2D1BQ5T0F9 858 aaKnown RBP24.48■■□□□ 1.51
PDE6B-208ENST00000474251 LGR6Q9HBX8 967 aa24.48■■□□□ 1.51
PDE6B-208ENST00000474251 CCDC87Q9NVE4 849 aa24.48■■□□□ 1.51
PDE6B-208ENST00000474251 SBF1O95248 1867 aa24.47■■□□□ 1.51
PDE6B-208ENST00000474251 NRXN2Q9P2S2 1712 aa24.47■■□□□ 1.51
PDE6B-208ENST00000474251 NPC1L1Q9UHC9 1359 aa24.47■■□□□ 1.51
PDE6B-208ENST00000474251 USP42Q9H9J4 1324 aaKnown RBP24.47■■□□□ 1.51
PDE6B-208ENST00000474251 GPBP1L1Q9HC44 474 aaPredicted RBP24.47■■□□□ 1.51
PDE6B-208ENST00000474251 DLEC1Q9Y238 1755 aa24.47■■□□□ 1.51
PDE6B-208ENST00000474251 RNMTO43148 476 aaKnown RBP24.46■■□□□ 1.51
PDE6B-208ENST00000474251 SRP68Q9UHB9 627 aaKnown RBP24.46■■□□□ 1.51
PDE6B-208ENST00000474251 PARP3Q9Y6F1 533 aa24.46■■□□□ 1.51
PDE6B-208ENST00000474251 CEP350Q5VT06 3117 aa24.45■■□□□ 1.5
PDE6B-208ENST00000474251 DIAPH1O60610 1272 aaKnown RBP24.45■■□□□ 1.5
PDE6B-208ENST00000474251 INTS5Q6P9B9 1019 aaKnown RBP24.45■■□□□ 1.5
PDE6B-208ENST00000474251 A0A0G2JLW4 131 aa24.44■■□□□ 1.5
PDE6B-208ENST00000474251 MTHFSDQ2M296 383 aaKnown RBP24.44■■□□□ 1.5
PDE6B-208ENST00000474251 DNAJC10Q8IXB1 793 aa24.44■■□□□ 1.5
PDE6B-208ENST00000474251 DPEP1P16444 411 aa24.43■■□□□ 1.5
PDE6B-208ENST00000474251 ZNF526Q8TF50 670 aaPredicted RBP24.43■■□□□ 1.5
PDE6B-208ENST00000474251 BCS1LQ9Y276 419 aa24.43■■□□□ 1.5
PDE6B-208ENST00000474251 SLC39A6Q13433 755 aa24.42■■□□□ 1.5
PDE6B-208ENST00000474251 FKBP8Q14318 412 aa24.42■■□□□ 1.5
PDE6B-208ENST00000474251 SOS1Q07889 1333 aaPredicted RBP24.41■■□□□ 1.5
PDE6B-208ENST00000474251 DDR1Q08345 913 aa24.41■■□□□ 1.5
PDE6B-208ENST00000474251 CCDC88AQ3V6T2 1871 aa24.4■■□□□ 1.5
PDE6B-208ENST00000474251 SCN7AQ01118 1682 aa24.4■■□□□ 1.5
PDE6B-208ENST00000474251 CYP19A1P11511 503 aaPredicted RBP24.38■■□□□ 1.49
PDE6B-208ENST00000474251 KCNA3P22001 575 aa24.38■■□□□ 1.49
PDE6B-208ENST00000474251 COL15A1P39059 1388 aa24.38■■□□□ 1.49
PDE6B-208ENST00000474251 FCHSD2O94868 740 aa24.37■■□□□ 1.49
PDE6B-208ENST00000474251 POLRMTO00411 1230 aaKnown RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms