RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 ATG3Q9NT62 314 aa24.23■■□□□ 1.47
CUL4A-208ENST00000474116 KIAA1551Q9HCM1 1747 aa24.23■■□□□ 1.47
CUL4A-208ENST00000474116 PXDNLA1KZ92 1463 aa24.22■■□□□ 1.47
CUL4A-208ENST00000474116 PPM1GO15355 546 aaPredicted RBP24.22■■□□□ 1.47
CUL4A-208ENST00000474116 IFNL2Q8IZJ0 200 aa24.21■■□□□ 1.47
CUL4A-208ENST00000474116 TGFB2P61812 414 aa24.19■■□□□ 1.46
CUL4A-208ENST00000474116 N4BP2Q86UW6 1770 aaPredicted RBP24.19■■□□□ 1.46
CUL4A-208ENST00000474116 SLC4A9Q96Q91 983 aa24.18■■□□□ 1.46
CUL4A-208ENST00000474116 KDRP35968 1356 aa24.17■■□□□ 1.46
CUL4A-208ENST00000474116 TRAPPC3LQ5T215 181 aa24.17■■□□□ 1.46
CUL4A-208ENST00000474116 POLKQ9UBT6 870 aa24.17■■□□□ 1.46
CUL4A-208ENST00000474116 A0A0G2JLW4 131 aa24.16■■□□□ 1.46
CUL4A-208ENST00000474116 NLGN1Q8N2Q7 840 aa24.16■■□□□ 1.46
CUL4A-208ENST00000474116 ZNF831Q5JPB2 1677 aa24.15■■□□□ 1.46
CUL4A-208ENST00000474116 APLP1P51693 650 aa24.15■■□□□ 1.46
CUL4A-208ENST00000474116 DNAJC5GQ8N7S2 189 aa24.15■■□□□ 1.46
CUL4A-208ENST00000474116 BCS1LQ9Y276 419 aa24.15■■□□□ 1.46
CUL4A-208ENST00000474116 RTCBQ9Y3I0 505 aaKnown RBP24.15■■□□□ 1.46
CUL4A-208ENST00000474116 C10orf71Q711Q0 1435 aa24.15■■□□□ 1.46
CUL4A-208ENST00000474116 TOMM70O94826 608 aa24.14■■□□□ 1.45
CUL4A-208ENST00000474116 RC3H1Q5TC82 1133 aaKnown RBP24.14■■□□□ 1.45
CUL4A-208ENST00000474116 ARHGEF1Q92888 912 aaKnown RBP24.14■■□□□ 1.45
CUL4A-208ENST00000474116 PLEKHG2Q9H7P9 1386 aa24.13■■□□□ 1.45
CUL4A-208ENST00000474116 ERVV-2B6SEH9 535 aa24.12■■□□□ 1.45
CUL4A-208ENST00000474116 EIF4A2Q14240 407 aaKnown RBP24.12■■□□□ 1.45
CUL4A-208ENST00000474116 C4AP0C0L4 1744 aa24.11■■□□□ 1.45
CUL4A-208ENST00000474116 COL5A3P25940 1745 aaPredicted RBP24.11■■□□□ 1.45
CUL4A-208ENST00000474116 GYS1P13807 737 aa24.11■■□□□ 1.45
CUL4A-208ENST00000474116 DPEP1P16444 411 aa24.11■■□□□ 1.45
CUL4A-208ENST00000474116 ADRA2BP18089 450 aa24.11■■□□□ 1.45
CUL4A-208ENST00000474116 ARHGAP27Q6ZUM4 889 aa24.11■■□□□ 1.45
CUL4A-208ENST00000474116 CCDC87Q9NVE4 849 aa24.1■■□□□ 1.45
CUL4A-208ENST00000474116 BRCA1P38398 1863 aaKnown RBP24.1■■□□□ 1.45
CUL4A-208ENST00000474116 CNTNAP4Q9C0A0 1308 aa24.1■■□□□ 1.45
CUL4A-208ENST00000474116 RPS6KA4O75676 772 aa24.09■■□□□ 1.45
CUL4A-208ENST00000474116 KCNA3P22001 575 aa24.09■■□□□ 1.45
CUL4A-208ENST00000474116 RBM42Q9BTD8 480 aaKnown RBP24.09■■□□□ 1.45
CUL4A-208ENST00000474116 NMRK2Q9NPI5 230 aa24.09■■□□□ 1.45
CUL4A-208ENST00000474116 FCHSD2O94868 740 aa24.07■■□□□ 1.44
CUL4A-208ENST00000474116 RFC4P35249 363 aa24.07■■□□□ 1.44
CUL4A-208ENST00000474116 DCAF5Q96JK2 942 aa24.07■■□□□ 1.44
CUL4A-208ENST00000474116 MYH14Q7Z406 1995 aaKnown RBP24.06■■□□□ 1.44
CUL4A-208ENST00000474116 PARP3Q9Y6F1 533 aa24.06■■□□□ 1.44
CUL4A-208ENST00000474116 HSP90AB1P08238 724 aaKnown RBP24.05■■□□□ 1.44
CUL4A-208ENST00000474116 KDM6AO15550 1401 aaPredicted RBP24.04■■□□□ 1.44
CUL4A-208ENST00000474116 ARFGEF1Q9Y6D6 1849 aa24.03■■□□□ 1.44
CUL4A-208ENST00000474116 TNNT2P45379 298 aaPredicted RBP24.03■■□□□ 1.44
CUL4A-208ENST00000474116 C9orf131Q5VYM1 1079 aa24.03■■□□□ 1.44
CUL4A-208ENST00000474116 RBM46Q8TBY0 533 aaKnown RBP24.03■■□□□ 1.44
CUL4A-208ENST00000474116 PLEKHO1Q53GL0 409 aaPredicted RBP24.02■■□□□ 1.44
CUL4A-208ENST00000474116 CABP4P57796 275 aa24.01■■□□□ 1.43
CUL4A-208ENST00000474116 PIM2Q9P1W9 311 aa24.01■■□□□ 1.43
CUL4A-208ENST00000474116 WDR90Q96KV7 1748 aa24.01■■□□□ 1.43
CUL4A-208ENST00000474116 AMOTQ4VCS5 1084 aa23.99■■□□□ 1.43
CUL4A-208ENST00000474116 ZNF530Q6P9A1 599 aaPredicted RBP23.99■■□□□ 1.43
CUL4A-208ENST00000474116 PTCD1O75127 700 aaKnown RBP23.98■■□□□ 1.43
CUL4A-208ENST00000474116 CRKLP46109 303 aaKnown RBP23.98■■□□□ 1.43
CUL4A-208ENST00000474116 DDR1Q08345 913 aa23.98■■□□□ 1.43
CUL4A-208ENST00000474116 FKBP8Q14318 412 aa23.98■■□□□ 1.43
CUL4A-208ENST00000474116 SRP68Q9UHB9 627 aaKnown RBP23.98■■□□□ 1.43
CUL4A-208ENST00000474116 DALRD3Q5D0E6 543 aaKnown RBP23.97■■□□□ 1.43
CUL4A-208ENST00000474116 USP42Q9H9J4 1324 aaKnown RBP23.97■■□□□ 1.43
CUL4A-208ENST00000474116 MTHFSP49914 203 aa23.96■■□□□ 1.43
CUL4A-208ENST00000474116 FSTL1Q12841 308 aa23.96■■□□□ 1.43
CUL4A-208ENST00000474116 NFATC2IPQ8NCF5 419 aa23.96■■□□□ 1.43
CUL4A-208ENST00000474116 KCPQ6ZWJ8 1503 aa23.95■■□□□ 1.43
CUL4A-208ENST00000474116 HTRA3P83110 453 aa23.95■■□□□ 1.42
CUL4A-208ENST00000474116 C16orf71Q8IYS4 520 aaPredicted RBP23.95■■□□□ 1.42
CUL4A-208ENST00000474116 TJP1Q07157 1748 aa23.95■■□□□ 1.42
CUL4A-208ENST00000474116 TM4SF1P30408 202 aa23.94■■□□□ 1.42
CUL4A-208ENST00000474116 AEBP1Q8IUX7 1158 aa23.94■■□□□ 1.42
CUL4A-208ENST00000474116 JMYQ8N9B5 988 aa23.94■■□□□ 1.42
CUL4A-208ENST00000474116 KLRG1Q96E93 195 aa23.94■■□□□ 1.42
CUL4A-208ENST00000474116 ADAMTS7Q9UKP4 1686 aa23.94■■□□□ 1.42
CUL4A-208ENST00000474116 KDM2BQ8NHM5 1336 aa23.93■■□□□ 1.42
CUL4A-208ENST00000474116 CHRNA5P30532 468 aa23.93■■□□□ 1.42
CUL4A-208ENST00000474116 INTS5Q6P9B9 1019 aaKnown RBP23.93■■□□□ 1.42
CUL4A-208ENST00000474116 RNF181Q9P0P0 153 aa23.93■■□□□ 1.42
CUL4A-208ENST00000474116 SBF1O95248 1867 aa23.92■■□□□ 1.42
CUL4A-208ENST00000474116 POLRMTO00411 1230 aaKnown RBP23.92■■□□□ 1.42
CUL4A-208ENST00000474116 RRAGCQ9HB90 399 aa23.92■■□□□ 1.42
CUL4A-208ENST00000474116 C1orf141Q5JVX7 400 aa23.91■■□□□ 1.42
CUL4A-208ENST00000474116 POLR3GLQ9BT43 218 aa23.91■■□□□ 1.42
CUL4A-208ENST00000474116 PANK3Q9H999 370 aa23.89■■□□□ 1.41
CUL4A-208ENST00000474116 TIMELESSQ9UNS1 1208 aa23.89■■□□□ 1.41
CUL4A-208ENST00000474116 COL13A1Q5TAT6 717 aaPredicted RBP23.88■■□□□ 1.41
CUL4A-208ENST00000474116 TNRC6CQ9HCJ0 1690 aaKnown RBP23.88■■□□□ 1.41
CUL4A-208ENST00000474116 SCN11AQ9UI33 1791 aa23.88■■□□□ 1.41
CUL4A-208ENST00000474116 SULT6B1Q6IMI4 303 aa23.87■■□□□ 1.41
CUL4A-208ENST00000474116 USPL1Q5W0Q7 1092 aa23.86■■□□□ 1.41
CUL4A-208ENST00000474116 DNAJC10Q8IXB1 793 aa23.85■■□□□ 1.41
CUL4A-208ENST00000474116 SOS1Q07889 1333 aaPredicted RBP23.84■■□□□ 1.41
CUL4A-208ENST00000474116 ZPR1O75312 459 aa23.84■■□□□ 1.41
CUL4A-208ENST00000474116 IL13P35225 146 aa23.83■■□□□ 1.41
CUL4A-208ENST00000474116 SMC1BQ8NDV3 1235 aa23.83■■□□□ 1.41
CUL4A-208ENST00000474116 ZC3H4Q9UPT8 1303 aaKnown RBP23.83■■□□□ 1.4
CUL4A-208ENST00000474116 AFDNP55196 1824 aaKnown RBP23.82■■□□□ 1.4
CUL4A-208ENST00000474116 PCNTO95613 3336 aa23.82■■□□□ 1.4
CUL4A-208ENST00000474116 CYP19A1P11511 503 aaPredicted RBP23.82■■□□□ 1.4
CUL4A-208ENST00000474116 PRELPP51888 382 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms