RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-211	ENST00000474088	GRIN3B	O60391	1043 aa		33.94	■■■■□ 3.02
PKD1-211	ENST00000474088	ERVV-2	B6SEH9	535 aa		33.93	■■■■□ 3.02
PKD1-211	ENST00000474088	HSP90AB1	P08238	724 aa	Known RBP	33.93	■■■■□ 3.02
PKD1-211	ENST00000474088	KNSTRN	Q9Y448	316 aa		33.93	■■■■□ 3.02
PKD1-211	ENST00000474088	DCAF5	Q96JK2	942 aa		33.92	■■■■□ 3.02
PKD1-211	ENST00000474088	GNPAT	O15228	680 aa		33.9	■■■■□ 3.02
PKD1-211	ENST00000474088	AMOT	Q4VCS5	1084 aa		33.9	■■■■□ 3.02
PKD1-211	ENST00000474088	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.88	■■■■□ 3.01
PKD1-211	ENST00000474088	AEBP1	Q8IUX7	1158 aa		33.87	■■■■□ 3.01
PKD1-211	ENST00000474088	SLC4A9	Q96Q91	983 aa		33.85	■■■■□ 3.01
PKD1-211	ENST00000474088	RBM42	Q9BTD8	480 aa	Known RBP	33.85	■■■■□ 3.01
PKD1-211	ENST00000474088	KDR	P35968	1356 aa		33.85	■■■■□ 3.01
PKD1-211	ENST00000474088	CABP4	P57796	275 aa		33.84	■■■■□ 3.01
PKD1-211	ENST00000474088	KDM6A	O15550	1401 aa	Predicted RBP	33.83	■■■■□ 3.01
PKD1-211	ENST00000474088	SULT6B1	Q6IMI4	303 aa		33.83	■■■■□ 3.01
PKD1-211	ENST00000474088	IL13	P35225	146 aa		33.82	■■■■□ 3
PKD1-211	ENST00000474088	MTHFS	P49914	203 aa		33.82	■■■■□ 3
PKD1-211	ENST00000474088	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.82	■■■■□ 3
PKD1-211	ENST00000474088	C1orf141	Q5JVX7	400 aa		33.81	■■■■□ 3
PKD1-211	ENST00000474088	C1QTNF8	P60827	252 aa		33.8	■■■■□ 3
PKD1-211	ENST00000474088	RTCB	Q9Y3I0	505 aa	Known RBP	33.8	■■■■□ 3
PKD1-211	ENST00000474088	KIF7	Q2M1P5	1343 aa		33.79	■■■■□ 3
PKD1-211	ENST00000474088	TRAPPC3L	Q5T215	181 aa		33.79	■■■■□ 3
PKD1-211	ENST00000474088	RC3H1	Q5TC82	1133 aa	Known RBP	33.79	■■■■□ 3
PKD1-211	ENST00000474088	ZNF831	Q5JPB2	1677 aa		33.78	■■■■□ 3
PKD1-211	ENST00000474088	NFATC2IP	Q8NCF5	419 aa		33.75	■■■□□ 2.99
PKD1-211	ENST00000474088	MMP10	P09238	476 aa		33.74	■■■□□ 2.99
PKD1-211	ENST00000474088	CNTNAP4	Q9C0A0	1308 aa		33.74	■■■□□ 2.99
PKD1-211	ENST00000474088	GIGYF1	O75420	1035 aa	Predicted RBP	33.73	■■■□□ 2.99
PKD1-211	ENST00000474088	ADRA2B	P18089	450 aa		33.73	■■■□□ 2.99
PKD1-211	ENST00000474088	ARHGEF1	Q92888	912 aa	Known RBP	33.73	■■■□□ 2.99
PKD1-211	ENST00000474088	RPS6KA4	O75676	772 aa		33.72	■■■□□ 2.99
PKD1-211	ENST00000474088	NLGN1	Q8N2Q7	840 aa		33.72	■■■□□ 2.99
PKD1-211	ENST00000474088	PER1	O15534	1290 aa	Predicted RBP	33.71	■■■□□ 2.99
PKD1-211	ENST00000474088	PTCD1	O75127	700 aa	Known RBP	33.71	■■■□□ 2.99
PKD1-211	ENST00000474088	WWC3	Q9ULE0	1092 aa		33.7	■■■□□ 2.99
PKD1-211	ENST00000474088	COL5A3	P25940	1745 aa	Predicted RBP	33.7	■■■□□ 2.98
PKD1-211	ENST00000474088	GOLGB1	Q14789	3259 aa	Known RBP	33.7	■■■□□ 2.98
PKD1-211	ENST00000474088	RFC4	P35249	363 aa		33.68	■■■□□ 2.98
PKD1-211	ENST00000474088	AKAP4	Q5JQC9	854 aa		33.68	■■■□□ 2.98
PKD1-211	ENST00000474088	SENP3-EIF4A1	A0A087X0R7	540 aa		33.66	■■■□□ 2.98
PKD1-211	ENST00000474088	GYS1	P13807	737 aa		33.65	■■■□□ 2.98
PKD1-211	ENST00000474088	ATP10D	Q9P241	1426 aa		33.64	■■■□□ 2.98
PKD1-211	ENST00000474088	CC2D1B	Q5T0F9	858 aa	Known RBP	33.64	■■■□□ 2.98
PKD1-211	ENST00000474088	HMOX1	P09601	288 aa		33.63	■■■□□ 2.97
PKD1-211	ENST00000474088	CRKL	P46109	303 aa	Known RBP	33.63	■■■□□ 2.97
PKD1-211	ENST00000474088	TGFB2	P61812	414 aa		33.62	■■■□□ 2.97
PKD1-211	ENST00000474088	LGR6	Q9HBX8	967 aa		33.62	■■■□□ 2.97
PKD1-211	ENST00000474088	SCN11A	Q9UI33	1791 aa		33.62	■■■□□ 2.97
PKD1-211	ENST00000474088	SLC52A2	Q9HAB3	445 aa		33.61	■■■□□ 2.97
PKD1-211	ENST00000474088	MYH14	Q7Z406	1995 aa	Known RBP	33.61	■■■□□ 2.97
PKD1-211	ENST00000474088	CIC	Q96RK0	1608 aa	Predicted RBP	33.61	■■■□□ 2.97
PKD1-211	ENST00000474088	DIAPH1	O60610	1272 aa	Known RBP	33.6	■■■□□ 2.97
PKD1-211	ENST00000474088	PXDNL	A1KZ92	1463 aa		33.58	■■■□□ 2.97
PKD1-211	ENST00000474088	CCDC87	Q9NVE4	849 aa		33.58	■■■□□ 2.97
PKD1-211	ENST00000474088	PARP3	Q9Y6F1	533 aa		33.58	■■■□□ 2.97
PKD1-211	ENST00000474088	ADCY9	O60503	1353 aa		33.58	■■■□□ 2.97
PKD1-211	ENST00000474088	KIF13B	Q9NQT8	1826 aa		33.58	■■■□□ 2.97
PKD1-211	ENST00000474088	RNMT	O43148	476 aa	Known RBP	33.57	■■■□□ 2.96
PKD1-211	ENST00000474088	C10orf71	Q711Q0	1435 aa		33.56	■■■□□ 2.96
PKD1-211	ENST00000474088		A0A0G2JLW4	131 aa		33.56	■■■□□ 2.96
PKD1-211	ENST00000474088	MTHFSD	Q2M296	383 aa	Known RBP	33.56	■■■□□ 2.96
PKD1-211	ENST00000474088	TJP1	Q07157	1748 aa		33.56	■■■□□ 2.96
PKD1-211	ENST00000474088	INTS5	Q6P9B9	1019 aa	Known RBP	33.55	■■■□□ 2.96
PKD1-211	ENST00000474088	GPBP1L1	Q9HC44	474 aa	Predicted RBP	33.55	■■■□□ 2.96
PKD1-211	ENST00000474088	C4A	P0C0L4	1744 aa		33.55	■■■□□ 2.96
PKD1-211	ENST00000474088	SRP68	Q9UHB9	627 aa	Known RBP	33.54	■■■□□ 2.96
PKD1-211	ENST00000474088	KIAA1551	Q9HCM1	1747 aa		33.53	■■■□□ 2.96
PKD1-211	ENST00000474088	DNAJC10	Q8IXB1	793 aa		33.53	■■■□□ 2.96
PKD1-211	ENST00000474088	USP42	Q9H9J4	1324 aa	Known RBP	33.53	■■■□□ 2.96
PKD1-211	ENST00000474088	NPC1L1	Q9UHC9	1359 aa		33.52	■■■□□ 2.96
PKD1-211	ENST00000474088	SLC39A6	Q13433	755 aa		33.52	■■■□□ 2.96
PKD1-211	ENST00000474088	FKBP8	Q14318	412 aa		33.51	■■■□□ 2.95
PKD1-211	ENST00000474088	BCS1L	Q9Y276	419 aa		33.51	■■■□□ 2.95
PKD1-211	ENST00000474088	N4BP2	Q86UW6	1770 aa	Predicted RBP	33.51	■■■□□ 2.95
PKD1-211	ENST00000474088	MRC1	P22897	1456 aa		33.5	■■■□□ 2.95
PKD1-211	ENST00000474088	DPEP1	P16444	411 aa		33.5	■■■□□ 2.95
PKD1-211	ENST00000474088	ZNF526	Q8TF50	670 aa	Predicted RBP	33.5	■■■□□ 2.95
PKD1-211	ENST00000474088	CNGB1	Q14028	1251 aa	Predicted RBP	33.48	■■■□□ 2.95
PKD1-211	ENST00000474088	CYP19A1	P11511	503 aa	Predicted RBP	33.47	■■■□□ 2.95
PKD1-211	ENST00000474088	KCNA3	P22001	575 aa		33.45	■■■□□ 2.95
PKD1-211	ENST00000474088	DDR1	Q08345	913 aa		33.45	■■■□□ 2.95
PKD1-211	ENST00000474088	ADAMTS7	Q9UKP4	1686 aa		33.45	■■■□□ 2.94
PKD1-211	ENST00000474088	SOS1	Q07889	1333 aa	Predicted RBP	33.44	■■■□□ 2.94
PKD1-211	ENST00000474088	COL3A1	P02461	1466 aa	Predicted RBP	33.44	■■■□□ 2.94
PKD1-211	ENST00000474088	U2SURP	O15042	1029 aa	Known RBP	33.43	■■■□□ 2.94
PKD1-211	ENST00000474088	ZPR1	O75312	459 aa		33.43	■■■□□ 2.94
PKD1-211	ENST00000474088	FCHSD2	O94868	740 aa		33.43	■■■□□ 2.94
PKD1-211	ENST00000474088	TM4SF1	P30408	202 aa		33.43	■■■□□ 2.94
PKD1-211	ENST00000474088	KCP	Q6ZWJ8	1503 aa		33.43	■■■□□ 2.94
PKD1-211	ENST00000474088	VIRMA	Q69YN4	1812 aa	Known RBP	33.42	■■■□□ 2.94
PKD1-211	ENST00000474088	USPL1	Q5W0Q7	1092 aa		33.42	■■■□□ 2.94
PKD1-211	ENST00000474088	ARHGAP27	Q6ZUM4	889 aa		33.42	■■■□□ 2.94
PKD1-211	ENST00000474088	VSIG10	Q8N0Z9	540 aa		33.42	■■■□□ 2.94
PKD1-211	ENST00000474088	POLRMT	O00411	1230 aa	Known RBP	33.39	■■■□□ 2.94
PKD1-211	ENST00000474088	PIM2	Q9P1W9	311 aa		33.39	■■■□□ 2.94
PKD1-211	ENST00000474088	ZBTB1	Q9Y2K1	713 aa		33.39	■■■□□ 2.94
PKD1-211	ENST00000474088	NARF	Q9UHQ1	456 aa		33.38	■■■□□ 2.93
PKD1-211	ENST00000474088	GAS2L2	Q8NHY3	880 aa		33.37	■■■□□ 2.93
PKD1-211	ENST00000474088	BRCA1	P38398	1863 aa	Known RBP	33.36	■■■□□ 2.93

Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms