RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 GRIN3BO60391 1043 aa18.42■□□□□ 0.54
COPS7B-219ENST00000474042 PHF14O94880 888 aa18.42■□□□□ 0.54
COPS7B-219ENST00000474042 KIAA1551Q9HCM1 1747 aa18.41■□□□□ 0.54
COPS7B-219ENST00000474042 SMIM5Q71RC9 77 aa18.41■□□□□ 0.54
COPS7B-219ENST00000474042 ATG3Q9NT62 314 aa18.41■□□□□ 0.54
COPS7B-219ENST00000474042 C4AP0C0L4 1744 aa18.4■□□□□ 0.54
COPS7B-219ENST00000474042 C1QTNF8P60827 252 aa18.39■□□□□ 0.53
COPS7B-219ENST00000474042 SCN11AQ9UI33 1791 aa18.39■□□□□ 0.53
COPS7B-219ENST00000474042 ERVV-2B6SEH9 535 aa18.38■□□□□ 0.53
COPS7B-219ENST00000474042 GNPATO15228 680 aa18.38■□□□□ 0.53
COPS7B-219ENST00000474042 ATP6V1AP38606 617 aa18.38■□□□□ 0.53
COPS7B-219ENST00000474042 ADCY9O60503 1353 aa18.38■□□□□ 0.53
COPS7B-219ENST00000474042 HSP90AB1P08238 724 aaKnown RBP18.37■□□□□ 0.53
COPS7B-219ENST00000474042 DCAF5Q96JK2 942 aa18.37■□□□□ 0.53
COPS7B-219ENST00000474042 SLC4A9Q96Q91 983 aa18.37■□□□□ 0.53
COPS7B-219ENST00000474042 TJP1Q07157 1748 aa18.37■□□□□ 0.53
COPS7B-219ENST00000474042 MYH14Q7Z406 1995 aaKnown RBP18.37■□□□□ 0.53
COPS7B-219ENST00000474042 PLEKHO1Q53GL0 409 aaPredicted RBP18.36■□□□□ 0.53
COPS7B-219ENST00000474042 GIGYF1O75420 1035 aaPredicted RBP18.35■□□□□ 0.53
COPS7B-219ENST00000474042 AMOTQ4VCS5 1084 aa18.35■□□□□ 0.53
COPS7B-219ENST00000474042 ZNF530Q6P9A1 599 aaPredicted RBP18.35■□□□□ 0.53
COPS7B-219ENST00000474042 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
COPS7B-219ENST00000474042 AEBP1Q8IUX7 1158 aa18.35■□□□□ 0.53
COPS7B-219ENST00000474042 VIRMAQ69YN4 1812 aaKnown RBP18.35■□□□□ 0.53
COPS7B-219ENST00000474042 ATP10DQ9P241 1426 aa18.34■□□□□ 0.53
COPS7B-219ENST00000474042 CNTNAP4Q9C0A0 1308 aa18.34■□□□□ 0.53
COPS7B-219ENST00000474042 PXDNLA1KZ92 1463 aa18.33■□□□□ 0.53
COPS7B-219ENST00000474042 CCER1Q8TC90 406 aaPredicted RBP18.33■□□□□ 0.52
COPS7B-219ENST00000474042 BRCA1P38398 1863 aaKnown RBP18.33■□□□□ 0.52
COPS7B-219ENST00000474042 MRC1P22897 1456 aa18.33■□□□□ 0.52
COPS7B-219ENST00000474042 C10orf71Q711Q0 1435 aa18.32■□□□□ 0.52
COPS7B-219ENST00000474042 N4BP2Q86UW6 1770 aaPredicted RBP18.32■□□□□ 0.52
COPS7B-219ENST00000474042 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
COPS7B-219ENST00000474042 RC3H1Q5TC82 1133 aaKnown RBP18.32■□□□□ 0.52
COPS7B-219ENST00000474042 ADAMTS7Q9UKP4 1686 aa18.31■□□□□ 0.52
COPS7B-219ENST00000474042 MMP10P09238 476 aa18.31■□□□□ 0.52
COPS7B-219ENST00000474042 ADRA2BP18089 450 aa18.31■□□□□ 0.52
COPS7B-219ENST00000474042 AMER1Q5JTC6 1135 aaPredicted RBP18.31■□□□□ 0.52
COPS7B-219ENST00000474042 RTCBQ9Y3I0 505 aaKnown RBP18.31■□□□□ 0.52
COPS7B-219ENST00000474042 KNSTRNQ9Y448 316 aa18.31■□□□□ 0.52
COPS7B-219ENST00000474042 IL13P35225 146 aa18.3■□□□□ 0.52
COPS7B-219ENST00000474042 CABP4P57796 275 aa18.3■□□□□ 0.52
COPS7B-219ENST00000474042 RBM42Q9BTD8 480 aaKnown RBP18.3■□□□□ 0.52
COPS7B-219ENST00000474042 KIF7Q2M1P5 1343 aa18.29■□□□□ 0.52
COPS7B-219ENST00000474042 C1orf141Q5JVX7 400 aa18.29■□□□□ 0.52
COPS7B-219ENST00000474042 SULT6B1Q6IMI4 303 aa18.29■□□□□ 0.52
COPS7B-219ENST00000474042 RPS6KA4O75676 772 aa18.28■□□□□ 0.52
COPS7B-219ENST00000474042 MTHFSP49914 203 aa18.28■□□□□ 0.52
COPS7B-219ENST00000474042 TRAPPC3LQ5T215 181 aa18.28■□□□□ 0.52
COPS7B-219ENST00000474042 ARHGEF1Q92888 912 aaKnown RBP18.27■□□□□ 0.52
COPS7B-219ENST00000474042 GYS1P13807 737 aa18.26■□□□□ 0.51
COPS7B-219ENST00000474042 NLGN1Q8N2Q7 840 aa18.26■□□□□ 0.51
COPS7B-219ENST00000474042 WWC3Q9ULE0 1092 aa18.26■□□□□ 0.51
COPS7B-219ENST00000474042 ARFGEF1Q9Y6D6 1849 aa18.26■□□□□ 0.51
COPS7B-219ENST00000474042 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
COPS7B-219ENST00000474042 KCPQ6ZWJ8 1503 aa18.24■□□□□ 0.51
COPS7B-219ENST00000474042 PTCD1O75127 700 aaKnown RBP18.24■□□□□ 0.51
COPS7B-219ENST00000474042 CRKLP46109 303 aaKnown RBP18.24■□□□□ 0.51
COPS7B-219ENST00000474042 NFATC2IPQ8NCF5 419 aa18.24■□□□□ 0.51
COPS7B-219ENST00000474042 COL3A1P02461 1466 aaPredicted RBP18.24■□□□□ 0.51
COPS7B-219ENST00000474042 RFC4P35249 363 aa18.23■□□□□ 0.51
COPS7B-219ENST00000474042 TGFB2P61812 414 aa18.23■□□□□ 0.51
COPS7B-219ENST00000474042 AKAP4Q5JQC9 854 aa18.23■□□□□ 0.51
COPS7B-219ENST00000474042 PER1O15534 1290 aaPredicted RBP18.22■□□□□ 0.51
COPS7B-219ENST00000474042 GPBP1L1Q9HC44 474 aaPredicted RBP18.22■□□□□ 0.51
COPS7B-219ENST00000474042 CCDC87Q9NVE4 849 aa18.22■□□□□ 0.51
COPS7B-219ENST00000474042 USP42Q9H9J4 1324 aaKnown RBP18.22■□□□□ 0.51
COPS7B-219ENST00000474042 SLC52A2Q9HAB3 445 aa18.21■□□□□ 0.51
COPS7B-219ENST00000474042 NPC1L1Q9UHC9 1359 aa18.2■□□□□ 0.5
COPS7B-219ENST00000474042 INTS5Q6P9B9 1019 aaKnown RBP18.19■□□□□ 0.5
COPS7B-219ENST00000474042 NRXN2Q9P2S2 1712 aa18.19■□□□□ 0.5
COPS7B-219ENST00000474042 SRP68Q9UHB9 627 aaKnown RBP18.19■□□□□ 0.5
COPS7B-219ENST00000474042 PARP3Q9Y6F1 533 aa18.19■□□□□ 0.5
COPS7B-219ENST00000474042 SIPA1L3O60292 1781 aaPredicted RBP18.19■□□□□ 0.5
COPS7B-219ENST00000474042 A0A0G2JLW4 131 aa18.18■□□□□ 0.5
COPS7B-219ENST00000474042 RNMTO43148 476 aaKnown RBP18.18■□□□□ 0.5
COPS7B-219ENST00000474042 HMOX1P09601 288 aa18.18■□□□□ 0.5
COPS7B-219ENST00000474042 LGR6Q9HBX8 967 aa18.18■□□□□ 0.5
COPS7B-219ENST00000474042 AFDNP55196 1824 aaKnown RBP18.18■□□□□ 0.5
COPS7B-219ENST00000474042 DPEP1P16444 411 aa18.17■□□□□ 0.5
COPS7B-219ENST00000474042 DDR1Q08345 913 aa18.17■□□□□ 0.5
COPS7B-219ENST00000474042 FKBP8Q14318 412 aa18.17■□□□□ 0.5
COPS7B-219ENST00000474042 DNAJC10Q8IXB1 793 aa18.17■□□□□ 0.5
COPS7B-219ENST00000474042 ZNF526Q8TF50 670 aaPredicted RBP18.17■□□□□ 0.5
COPS7B-219ENST00000474042 BCS1LQ9Y276 419 aa18.17■□□□□ 0.5
COPS7B-219ENST00000474042 SOS1Q07889 1333 aaPredicted RBP18.17■□□□□ 0.5
COPS7B-219ENST00000474042 DLEC1Q9Y238 1755 aa18.17■□□□□ 0.5
COPS7B-219ENST00000474042 DIAPH1O60610 1272 aaKnown RBP18.15■□□□□ 0.5
COPS7B-219ENST00000474042 KCNA3P22001 575 aa18.15■□□□□ 0.5
COPS7B-219ENST00000474042 MTHFSDQ2M296 383 aaKnown RBP18.15■□□□□ 0.5
COPS7B-219ENST00000474042 KIF3CO14782 793 aa18.14■□□□□ 0.49
COPS7B-219ENST00000474042 CYP19A1P11511 503 aaPredicted RBP18.14■□□□□ 0.49
COPS7B-219ENST00000474042 CC2D1BQ5T0F9 858 aaKnown RBP18.14■□□□□ 0.49
COPS7B-219ENST00000474042 SCN7AQ01118 1682 aa18.14■□□□□ 0.49
COPS7B-219ENST00000474042 COL15A1P39059 1388 aa18.14■□□□□ 0.49
COPS7B-219ENST00000474042 CEP350Q5VT06 3117 aa18.13■□□□□ 0.49
COPS7B-219ENST00000474042 POLRMTO00411 1230 aaKnown RBP18.13■□□□□ 0.49
COPS7B-219ENST00000474042 SLC39A6Q13433 755 aa18.13■□□□□ 0.49
COPS7B-219ENST00000474042 FCHSD2O94868 740 aa18.12■□□□□ 0.49
COPS7B-219ENST00000474042 TM4SF1P30408 202 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms