RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 COL22A1Q8NFW1 1626 aaPredicted RBP10.06□□□□□ -0.8
CCDC93-207ENST00000474006 WDR17Q8IZU2 1322 aa10.06□□□□□ -0.8
CCDC93-207ENST00000474006 IGSF1Q8N6C5 1336 aa10.06□□□□□ -0.8
CCDC93-207ENST00000474006 USP54Q70EL1 1684 aa10.06□□□□□ -0.8
CCDC93-207ENST00000474006 CAMTA1Q9Y6Y1 1673 aa10.06□□□□□ -0.8
CCDC93-207ENST00000474006 COL3A1P02461 1466 aaPredicted RBP10.05□□□□□ -0.8
CCDC93-207ENST00000474006 LRP6O75581 1613 aa10.05□□□□□ -0.8
CCDC93-207ENST00000474006 G3V3G9 751 aa10.05□□□□□ -0.8
CCDC93-207ENST00000474006 KIF3CO14782 793 aa10.05□□□□□ -0.8
CCDC93-207ENST00000474006 CCDC146Q8IYE0 955 aa10.05□□□□□ -0.8
CCDC93-207ENST00000474006 ZC3H15Q8WU90 426 aaKnown RBP10.05□□□□□ -0.8
CCDC93-207ENST00000474006 L3MBTL3Q96JM7 780 aaPredicted RBP10.05□□□□□ -0.8
CCDC93-207ENST00000474006 PLEKHF1Q96S99 279 aa10.05□□□□□ -0.8
CCDC93-207ENST00000474006 RSPH6AQ9H0K4 717 aa10.05□□□□□ -0.8
CCDC93-207ENST00000474006 USP35Q9P2H5 1018 aa10.05□□□□□ -0.8
CCDC93-207ENST00000474006 SPDYE16A6NNV3 312 aaPredicted RBP10.04□□□□□ -0.8
CCDC93-207ENST00000474006 PRKAR2BP31323 418 aa10.04□□□□□ -0.8
CCDC93-207ENST00000474006 RUNDC1Q96C34 613 aa10.04□□□□□ -0.8
CCDC93-207ENST00000474006 PHACTR3Q96KR7 559 aa10.04□□□□□ -0.8
CCDC93-207ENST00000474006 QTRT2Q9H974 415 aaKnown RBP10.04□□□□□ -0.8
CCDC93-207ENST00000474006 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
CCDC93-207ENST00000474006 CCDC9Q9Y3X0 531 aaKnown RBP10.04□□□□□ -0.8
CCDC93-207ENST00000474006 ANKRD26Q9UPS8 1709 aa10.04□□□□□ -0.8
CCDC93-207ENST00000474006 AFF2P51816 1311 aa10.04□□□□□ -0.8
CCDC93-207ENST00000474006 SENP3-EIF4A1A0A087X0R7 540 aa10.03□□□□□ -0.8
CCDC93-207ENST00000474006 VPS72Q15906 364 aa10.03□□□□□ -0.8
CCDC93-207ENST00000474006 PEAK1Q9H792 1746 aa10.03□□□□□ -0.8
CCDC93-207ENST00000474006 PHRF1Q9P1Y6 1649 aaKnown RBP10.03□□□□□ -0.8
CCDC93-207ENST00000474006 COL5A2P05997 1499 aaPredicted RBP10.03□□□□□ -0.8
CCDC93-207ENST00000474006 BCL9LQ86UU0 1499 aa10.03□□□□□ -0.8
CCDC93-207ENST00000474006 SHPRHQ149N8 1683 aa10.02□□□□□ -0.8
CCDC93-207ENST00000474006 SLIT2O94813 1529 aa10.02□□□□□ -0.8
CCDC93-207ENST00000474006 APAF1O14727 1248 aa10.02□□□□□ -0.81
CCDC93-207ENST00000474006 NEFMP07197 916 aa10.02□□□□□ -0.81
CCDC93-207ENST00000474006 PDIA6Q15084 440 aa10.02□□□□□ -0.81
CCDC93-207ENST00000474006 TCP11L2Q8N4U5 519 aa10.02□□□□□ -0.81
CCDC93-207ENST00000474006 RAPGEF4Q8WZA2 1011 aa10.02□□□□□ -0.81
CCDC93-207ENST00000474006 SPATA31A1Q5TZJ5 1347 aa10.02□□□□□ -0.81
CCDC93-207ENST00000474006 SPATA31A5Q5VU36 1347 aa10.02□□□□□ -0.81
CCDC93-207ENST00000474006 SPATA31A7Q8IWB4 1347 aa10.02□□□□□ -0.81
CCDC93-207ENST00000474006 C2orf72A6NCS6 295 aa10.01□□□□□ -0.81
CCDC93-207ENST00000474006 DPYSL4O14531 572 aa10.01□□□□□ -0.81
CCDC93-207ENST00000474006 TATP17735 454 aaPredicted RBP10.01□□□□□ -0.81
CCDC93-207ENST00000474006 PLEKHO1Q53GL0 409 aaPredicted RBP10.01□□□□□ -0.81
CCDC93-207ENST00000474006 DCBLD2Q96PD2 775 aa10.01□□□□□ -0.81
CCDC93-207ENST00000474006 TRPC5Q9UL62 973 aaPredicted RBP10.01□□□□□ -0.81
CCDC93-207ENST00000474006 THRAP3Q9Y2W1 955 aaKnown RBP10.01□□□□□ -0.81
CCDC93-207ENST00000474006 CRYBG1Q9Y4K1 1723 aa10.01□□□□□ -0.81
CCDC93-207ENST00000474006 KDRP35968 1356 aa10.01□□□□□ -0.81
CCDC93-207ENST00000474006 MAP2P11137 1827 aaKnown RBP10□□□□□ -0.81
CCDC93-207ENST00000474006 CRB1P82279 1406 aa10□□□□□ -0.81
CCDC93-207ENST00000474006 IL2RBP14784 551 aa10□□□□□ -0.81
CCDC93-207ENST00000474006 NEUROD2Q15784 382 aa10□□□□□ -0.81
CCDC93-207ENST00000474006 MTHFSDQ2M296 383 aaKnown RBP10□□□□□ -0.81
CCDC93-207ENST00000474006 ZNF772Q68DY9 489 aaPredicted RBP10□□□□□ -0.81
CCDC93-207ENST00000474006 PLPP6Q8IY26 295 aa10□□□□□ -0.81
CCDC93-207ENST00000474006 PELP1Q8IZL8 1130 aaKnown RBP10□□□□□ -0.81
CCDC93-207ENST00000474006 GJD4Q96KN9 370 aaPredicted RBP10□□□□□ -0.81
CCDC93-207ENST00000474006 YTHDC1Q96MU7 727 aaKnown RBP10□□□□□ -0.81
CCDC93-207ENST00000474006 RRP7AQ9Y3A4 280 aaKnown RBP10□□□□□ -0.81
CCDC93-207ENST00000474006 SALL2Q9Y467 1007 aaPredicted RBP10□□□□□ -0.81
CCDC93-207ENST00000474006 ABCC6O95255 1503 aa10□□□□□ -0.81
CCDC93-207ENST00000474006 COL18A1P39060 1754 aa10□□□□□ -0.81
CCDC93-207ENST00000474006 MAPK8IP3Q9UPT6 1336 aa10□□□□□ -0.81
CCDC93-207ENST00000474006 TMPOP42166 694 aaKnown RBP9.99□□□□□ -0.81
CCDC93-207ENST00000474006 RIPK4P57078 832 aa9.99□□□□□ -0.81
CCDC93-207ENST00000474006 HNRNPUQ00839 825 aaKnown RBP eCLIP9.99□□□□□ -0.81
CCDC93-207ENST00000474006 NFE2L2Q16236 605 aa9.99□□□□□ -0.81
CCDC93-207ENST00000474006 FAM98CQ17RN3 349 aaKnown RBP9.99□□□□□ -0.81
CCDC93-207ENST00000474006 AMOTQ4VCS5 1084 aa9.99□□□□□ -0.81
CCDC93-207ENST00000474006 BARGINQ6ZT62 677 aa9.99□□□□□ -0.81
CCDC93-207ENST00000474006 SLC39A7Q92504 469 aa9.99□□□□□ -0.81
CCDC93-207ENST00000474006 RGS17Q9UGC6 210 aaPredicted RBP9.99□□□□□ -0.81
CCDC93-207ENST00000474006 EXOC5O00471 708 aa9.98□□□□□ -0.81
CCDC93-207ENST00000474006 SEC24BO95487 1268 aa9.98□□□□□ -0.81
CCDC93-207ENST00000474006 ZCRB1Q8TBF4 217 aaKnown RBP9.98□□□□□ -0.81
CCDC93-207ENST00000474006 CDCA7Q9BWT1 371 aaPredicted RBP9.98□□□□□ -0.81
CCDC93-207ENST00000474006 SPG7Q9UQ90 795 aa9.98□□□□□ -0.81
CCDC93-207ENST00000474006 COLQQ9Y215 455 aaPredicted RBP9.98□□□□□ -0.81
CCDC93-207ENST00000474006 LMO7Q8WWI1 1683 aa9.98□□□□□ -0.81
CCDC93-207ENST00000474006 COL14A1Q05707 1796 aaKnown RBP9.98□□□□□ -0.81
CCDC93-207ENST00000474006 ABCA3Q99758 1704 aa9.97□□□□□ -0.81
CCDC93-207ENST00000474006 ONECUT3O60422 494 aaPredicted RBP9.97□□□□□ -0.81
CCDC93-207ENST00000474006 ZMYND10O75800 440 aa9.97□□□□□ -0.81
CCDC93-207ENST00000474006 C7P10643 843 aa9.97□□□□□ -0.81
CCDC93-207ENST00000474006 MLLT3P42568 568 aaPredicted RBP9.97□□□□□ -0.81
CCDC93-207ENST00000474006 GAS2L2Q8NHY3 880 aa9.97□□□□□ -0.81
CCDC93-207ENST00000474006 DDX54Q8TDD1 881 aaKnown RBP9.97□□□□□ -0.81
CCDC93-207ENST00000474006 NCAPD2Q15021 1401 aa9.97□□□□□ -0.81
CCDC93-207ENST00000474006 ZNF530Q6P9A1 599 aaPredicted RBP9.96□□□□□ -0.82
CCDC93-207ENST00000474006 NGEFQ8N5V2 710 aa9.96□□□□□ -0.82
CCDC93-207ENST00000474006 LTN1O94822 1766 aa9.96□□□□□ -0.82
CCDC93-207ENST00000474006 GNAT3A8MTJ3 354 aa9.95□□□□□ -0.82
CCDC93-207ENST00000474006 CYP27B1O15528 508 aa9.95□□□□□ -0.82
CCDC93-207ENST00000474006 RXRBP28702 533 aa9.95□□□□□ -0.82
CCDC93-207ENST00000474006 RBM6P78332 1123 aaKnown RBP9.95□□□□□ -0.82
CCDC93-207ENST00000474006 DDB1Q16531 1140 aa9.95□□□□□ -0.82
CCDC93-207ENST00000474006 AKAP4Q5JQC9 854 aa9.95□□□□□ -0.82
CCDC93-207ENST00000474006 POTEAQ6S8J7 498 aa9.95□□□□□ -0.82
CCDC93-207ENST00000474006 WWC1Q8IX03 1113 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms