RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ELOAQ14241 798 aaKnown RBP7.26□□□□□ -1.25
BRCA1-212ENST00000473961 SLFNL1Q499Z3 407 aa7.26□□□□□ -1.25
BRCA1-212ENST00000473961 PDXDC2PQ6P474 469 aa7.26□□□□□ -1.25
BRCA1-212ENST00000473961 TBC1D9Q6ZT07 1266 aa7.26□□□□□ -1.25
BRCA1-212ENST00000473961 Q6ZVU0 165 aa7.26□□□□□ -1.25
BRCA1-212ENST00000473961 C1QTNF2Q9BXJ5 285 aa7.26□□□□□ -1.25
BRCA1-212ENST00000473961 MBIPQ9NS73 344 aa7.26□□□□□ -1.25
BRCA1-212ENST00000473961 MAP4K5Q9Y4K4 846 aa7.26□□□□□ -1.25
BRCA1-212ENST00000473961 IGF1RP08069 1367 aa7.25□□□□□ -1.25
BRCA1-212ENST00000473961 PLEKHM2Q8IWE5 1019 aa7.25□□□□□ -1.25
BRCA1-212ENST00000473961 CCDC116Q8IYX3 515 aa7.25□□□□□ -1.25
BRCA1-212ENST00000473961 MAP10Q9P2G4 905 aa7.25□□□□□ -1.25
BRCA1-212ENST00000473961 SKIP12755 728 aa7.24□□□□□ -1.25
BRCA1-212ENST00000473961 AGERQ15109 404 aa7.24□□□□□ -1.25
BRCA1-212ENST00000473961 ACDQ96AP0 544 aa7.24□□□□□ -1.25
BRCA1-212ENST00000473961 USP17L3A6NCW0 530 aa7.23□□□□□ -1.25
BRCA1-212ENST00000473961 USP17L4A6NCW7 530 aa7.23□□□□□ -1.25
BRCA1-212ENST00000473961 USP17L5A8MUK1 530 aa7.23□□□□□ -1.25
BRCA1-212ENST00000473961 MFAP1P55081 439 aaKnown RBP7.23□□□□□ -1.25
BRCA1-212ENST00000473961 USP17L2Q6R6M4 530 aa7.23□□□□□ -1.25
BRCA1-212ENST00000473961 USP17L1Q7RTZ2 530 aa7.23□□□□□ -1.25
BRCA1-212ENST00000473961 BPHLQ86WA6 291 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-212ENST00000473961 RNF217Q8TC41 542 aa7.23□□□□□ -1.25
BRCA1-212ENST00000473961 ATP5J2-PTCD1G3V325 749 aa7.22□□□□□ -1.25
BRCA1-212ENST00000473961 COL8A1P27658 744 aa7.22□□□□□ -1.25
BRCA1-212ENST00000473961 LARP1Q6PKG0 1096 aaKnown RBP7.22□□□□□ -1.25
BRCA1-212ENST00000473961 VASH1Q7L8A9 365 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-212ENST00000473961 RNF135Q8IUD6 432 aa7.22□□□□□ -1.25
BRCA1-212ENST00000473961 PCDHB9Q9Y5E1 797 aa7.22□□□□□ -1.25
BRCA1-212ENST00000473961 FAM196BA6NMK8 535 aa7.21□□□□□ -1.26
BRCA1-212ENST00000473961 SNRPNP63162 240 aaKnown RBP7.21□□□□□ -1.26
BRCA1-212ENST00000473961 MAP7D1Q3KQU3 841 aa7.21□□□□□ -1.26
BRCA1-212ENST00000473961 CDCA8Q53HL2 280 aa7.21□□□□□ -1.26
BRCA1-212ENST00000473961 ZMYM1Q5SVZ6 1142 aa7.21□□□□□ -1.26
BRCA1-212ENST00000473961 ZBTB33Q86T24 672 aa7.21□□□□□ -1.26
BRCA1-212ENST00000473961 ARHGAP9Q9BRR9 750 aa7.21□□□□□ -1.26
BRCA1-212ENST00000473961 TMEM88BA6NKF7 163 aa7.2□□□□□ -1.26
BRCA1-212ENST00000473961 EML3Q32P44 896 aa7.2□□□□□ -1.26
BRCA1-212ENST00000473961 KANK4Q5T7N3 995 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-212ENST00000473961 PPP1R26Q5T8A7 1209 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-212ENST00000473961 TRIM50Q86XT4 487 aa7.2□□□□□ -1.26
BRCA1-212ENST00000473961 TRMT44Q8IYL2 757 aaKnown RBP7.2□□□□□ -1.26
BRCA1-212ENST00000473961 CCER1Q8TC90 406 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-212ENST00000473961 INSM2Q96T92 566 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-212ENST00000473961 CEP126Q9P2H0 1117 aa7.2□□□□□ -1.26
BRCA1-212ENST00000473961 NOVA2Q9UNW9 492 aaKnown RBP7.2□□□□□ -1.26
BRCA1-212ENST00000473961 GPR25O00155 361 aa7.19□□□□□ -1.26
BRCA1-212ENST00000473961 ATP1A2P50993 1020 aa7.19□□□□□ -1.26
BRCA1-212ENST00000473961 ALYREFQ86V81 257 aaKnown RBP7.19□□□□□ -1.26
BRCA1-212ENST00000473961 ZNF837Q96EG3 531 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-212ENST00000473961 AGBL1Q96MI9 1066 aa7.19□□□□□ -1.26
BRCA1-212ENST00000473961 LRRC4BQ9NT99 713 aa7.19□□□□□ -1.26
BRCA1-212ENST00000473961 IVNS1ABPQ9Y6Y0 642 aa7.19□□□□□ -1.26
BRCA1-212ENST00000473961 USP17L15C9J2P7 530 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 USP17L10C9JJH3 530 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 USP17L13C9JLJ4 530 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 USP17L12C9JPN9 530 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 USP17L11C9JVI0 530 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 USP17L21D6R901 530 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 USP17L18D6R9N7 530 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 USP17L22D6RA61 530 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 USP17L17D6RBQ6 530 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 USP17L19D6RCP7 530 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 USP17L20D6RJB6 530 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 PIK3CDO00329 1044 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 USP17L24Q0WX57 530 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 CCDC27Q2M243 656 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 RNF20Q5VTR2 975 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 DZIP3Q86Y13 1208 aaKnown RBP7.18□□□□□ -1.26
BRCA1-212ENST00000473961 PLPP7Q8NBV4 271 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 FAM200AQ8TCP9 573 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 POLMQ9NP87 494 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-212ENST00000473961 PGPEP1Q9NXJ5 209 aa7.18□□□□□ -1.26
BRCA1-212ENST00000473961 MKRN1Q9UHC7 482 aaKnown RBP7.18□□□□□ -1.26
BRCA1-212ENST00000473961 RBM19Q9Y4C8 960 aaKnown RBP7.18□□□□□ -1.26
BRCA1-212ENST00000473961 RASA1P20936 1047 aa7.17□□□□□ -1.26
BRCA1-212ENST00000473961 NCOA4Q13772 614 aa7.17□□□□□ -1.26
BRCA1-212ENST00000473961 SND1Q7KZF4 910 aaKnown RBP eCLIP7.17□□□□□ -1.26
BRCA1-212ENST00000473961 CCDC125Q86Z20 511 aa7.17□□□□□ -1.26
BRCA1-212ENST00000473961 ADAM32Q8TC27 787 aa7.17□□□□□ -1.26
BRCA1-212ENST00000473961 TRIM52Q96A61 297 aa7.17□□□□□ -1.26
BRCA1-212ENST00000473961 GNEQ9Y223 722 aaKnown RBP7.17□□□□□ -1.26
BRCA1-212ENST00000473961 OIP5O43482 229 aa7.16□□□□□ -1.26
BRCA1-212ENST00000473961 RELBQ01201 579 aa7.16□□□□□ -1.26
BRCA1-212ENST00000473961 TMEM164Q5U3C3 297 aa7.16□□□□□ -1.26
BRCA1-212ENST00000473961 FOXD4L5Q5VV16 416 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-212ENST00000473961 RGS22Q8NE09 1264 aa7.16□□□□□ -1.26
BRCA1-212ENST00000473961 SIRT1Q96EB6 747 aa7.16□□□□□ -1.26
BRCA1-212ENST00000473961 KRTAP4-7Q9BYR0 210 aa7.16□□□□□ -1.26
BRCA1-212ENST00000473961 MTMR7Q9Y216 660 aa7.16□□□□□ -1.26
BRCA1-212ENST00000473961 NOD1Q9Y239 953 aa7.16□□□□□ -1.26
BRCA1-212ENST00000473961 NBPF20Q3BBV1 942 aa7.15□□□□□ -1.26
BRCA1-212ENST00000473961 FOXD4L6Q3SYB3 417 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-212ENST00000473961 FOXD4L3Q6VB84 417 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-212ENST00000473961 DEPDC4Q8N2C3 294 aa7.15□□□□□ -1.26
BRCA1-212ENST00000473961 CDCA7Q9BWT1 371 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-212ENST00000473961 SEMA6BQ9H3T3 888 aa7.15□□□□□ -1.26
BRCA1-212ENST00000473961 CDV3Q9UKY7 258 aaKnown RBP7.15□□□□□ -1.26
BRCA1-212ENST00000473961 MKL2Q9ULH7 1088 aa7.15□□□□□ -1.26
BRCA1-212ENST00000473961 C1QTNF9BB2RNN3 333 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms