RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 AEBP1Q8IUX7 1158 aa15.47■□□□□ 0.07
ACTB-209ENST00000473257 PANK3Q9H999 370 aa15.47■□□□□ 0.07
ACTB-209ENST00000473257 SSFA2P28290 1259 aa15.46■□□□□ 0.07
ACTB-209ENST00000473257 RBM42Q9BTD8 480 aaKnown RBP15.46■□□□□ 0.07
ACTB-209ENST00000473257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.46■□□□□ 0.07
ACTB-209ENST00000473257 MMP10P09238 476 aa15.45■□□□□ 0.06
ACTB-209ENST00000473257 ZNF530Q6P9A1 599 aaPredicted RBP15.44■□□□□ 0.06
ACTB-209ENST00000473257 KDM6AO15550 1401 aaPredicted RBP15.43■□□□□ 0.06
ACTB-209ENST00000473257 KDRP35968 1356 aa15.43■□□□□ 0.06
ACTB-209ENST00000473257 ADCY9O60503 1353 aa15.41■□□□□ 0.06
ACTB-209ENST00000473257 A0A0G2JLW4 131 aa15.41■□□□□ 0.06
ACTB-209ENST00000473257 PTCD1O75127 700 aaKnown RBP15.41■□□□□ 0.06
ACTB-209ENST00000473257 EIF4G2P78344 907 aaKnown RBP eCLIP15.41■□□□□ 0.06
ACTB-209ENST00000473257 ARHGEF1Q92888 912 aaKnown RBP15.41■□□□□ 0.06
ACTB-209ENST00000473257 GPBP1L1Q9HC44 474 aaPredicted RBP15.41■□□□□ 0.06
ACTB-209ENST00000473257 TIMELESSQ9UNS1 1208 aa15.41■□□□□ 0.06
ACTB-209ENST00000473257 CICQ96RK0 1608 aaPredicted RBP15.4■□□□□ 0.06
ACTB-209ENST00000473257 MORC1Q86VD1 984 aa15.4■□□□□ 0.06
ACTB-209ENST00000473257 PXDNLA1KZ92 1463 aa15.4■□□□□ 0.06
ACTB-209ENST00000473257 N4BP2Q86UW6 1770 aaPredicted RBP15.39■□□□□ 0.05
ACTB-209ENST00000473257 ERVV-2B6SEH9 535 aa15.39■□□□□ 0.05
ACTB-209ENST00000473257 CABP4P57796 275 aa15.39■□□□□ 0.05
ACTB-209ENST00000473257 PLEKHO1Q53GL0 409 aaPredicted RBP15.39■□□□□ 0.05
ACTB-209ENST00000473257 TRAPPC3LQ5T215 181 aa15.39■□□□□ 0.05
ACTB-209ENST00000473257 DCAF5Q96JK2 942 aa15.39■□□□□ 0.05
ACTB-209ENST00000473257 SRP68Q9UHB9 627 aaKnown RBP15.39■□□□□ 0.05
ACTB-209ENST00000473257 RTCBQ9Y3I0 505 aaKnown RBP15.39■□□□□ 0.05
ACTB-209ENST00000473257 SULT6B1Q6IMI4 303 aa15.38■□□□□ 0.05
ACTB-209ENST00000473257 MYH14Q7Z406 1995 aaKnown RBP15.38■□□□□ 0.05
ACTB-209ENST00000473257 KIAA1551Q9HCM1 1747 aa15.37■□□□□ 0.05
ACTB-209ENST00000473257 GYS1P13807 737 aa15.37■□□□□ 0.05
ACTB-209ENST00000473257 MTHFSP49914 203 aa15.37■□□□□ 0.05
ACTB-209ENST00000473257 NFATC2IPQ8NCF5 419 aa15.37■□□□□ 0.05
ACTB-209ENST00000473257 BCS1LQ9Y276 419 aa15.37■□□□□ 0.05
ACTB-209ENST00000473257 DPEP1P16444 411 aa15.36■□□□□ 0.05
ACTB-209ENST00000473257 HMGB2P26583 209 aaKnown RBP15.36■□□□□ 0.05
ACTB-209ENST00000473257 COL5A3P25940 1745 aaPredicted RBP15.36■□□□□ 0.05
ACTB-209ENST00000473257 RPS6KA4O75676 772 aa15.35■□□□□ 0.05
ACTB-209ENST00000473257 RFC4P35249 363 aa15.35■□□□□ 0.05
ACTB-209ENST00000473257 CRKLP46109 303 aaKnown RBP15.35■□□□□ 0.05
ACTB-209ENST00000473257 CNTNAP4Q9C0A0 1308 aa15.35■□□□□ 0.05
ACTB-209ENST00000473257 C10orf71Q711Q0 1435 aa15.34■□□□□ 0.05
ACTB-209ENST00000473257 HSP90AB1P08238 724 aaKnown RBP15.34■□□□□ 0.05
ACTB-209ENST00000473257 IL13P35225 146 aa15.34■□□□□ 0.05
ACTB-209ENST00000473257 CNGB1Q14028 1251 aaPredicted RBP15.34■□□□□ 0.05
ACTB-209ENST00000473257 C1orf141Q5JVX7 400 aa15.34■□□□□ 0.05
ACTB-209ENST00000473257 RC3H1Q5TC82 1133 aaKnown RBP15.34■□□□□ 0.05
ACTB-209ENST00000473257 ARHGAP27Q6ZUM4 889 aa15.34■□□□□ 0.05
ACTB-209ENST00000473257 NLGN1Q8N2Q7 840 aa15.34■□□□□ 0.05
ACTB-209ENST00000473257 CCER1Q8TC90 406 aaPredicted RBP15.34■□□□□ 0.05
ACTB-209ENST00000473257 CLSPNQ9HAW4 1339 aa15.34■□□□□ 0.05
ACTB-209ENST00000473257 C4AP0C0L4 1744 aa15.34■□□□□ 0.05
ACTB-209ENST00000473257 KIF3CO14782 793 aa15.33■□□□□ 0.04
ACTB-209ENST00000473257 DDR1Q08345 913 aa15.33■□□□□ 0.04
ACTB-209ENST00000473257 FKBP8Q14318 412 aa15.33■□□□□ 0.04
ACTB-209ENST00000473257 AMOTQ4VCS5 1084 aa15.33■□□□□ 0.04
ACTB-209ENST00000473257 LGR6Q9HBX8 967 aa15.33■□□□□ 0.04
ACTB-209ENST00000473257 KIF13BQ9NQT8 1826 aa15.33■□□□□ 0.04
ACTB-209ENST00000473257 FCHSD2O94868 740 aa15.32■□□□□ 0.04
ACTB-209ENST00000473257 HMOX1P09601 288 aa15.32■□□□□ 0.04
ACTB-209ENST00000473257 SLC39A6Q13433 755 aa15.32■□□□□ 0.04
ACTB-209ENST00000473257 KNSTRNQ9Y448 316 aa15.32■□□□□ 0.04
ACTB-209ENST00000473257 PARP3Q9Y6F1 533 aa15.32■□□□□ 0.04
ACTB-209ENST00000473257 TJP1Q07157 1748 aa15.31■□□□□ 0.04
ACTB-209ENST00000473257 KCNA3P22001 575 aa15.31■□□□□ 0.04
ACTB-209ENST00000473257 AMER1Q5JTC6 1135 aaPredicted RBP15.31■□□□□ 0.04
ACTB-209ENST00000473257 INTS5Q6P9B9 1019 aaKnown RBP15.31■□□□□ 0.04
ACTB-209ENST00000473257 DNAJC10Q8IXB1 793 aa15.31■□□□□ 0.04
ACTB-209ENST00000473257 CCDC87Q9NVE4 849 aa15.31■□□□□ 0.04
ACTB-209ENST00000473257 HSPA6P17066 643 aa15.3■□□□□ 0.04
ACTB-209ENST00000473257 ADRA2BP18089 450 aa15.3■□□□□ 0.04
ACTB-209ENST00000473257 CHRNA5P30532 468 aa15.3■□□□□ 0.04
ACTB-209ENST00000473257 TGFB2P61812 414 aa15.3■□□□□ 0.04
ACTB-209ENST00000473257 ZNF831Q5JPB2 1677 aa15.3■□□□□ 0.04
ACTB-209ENST00000473257 KIF7Q2M1P5 1343 aa15.29■□□□□ 0.04
ACTB-209ENST00000473257 USP42Q9H9J4 1324 aaKnown RBP15.29■□□□□ 0.04
ACTB-209ENST00000473257 NMRK2Q9NPI5 230 aa15.29■□□□□ 0.04
ACTB-209ENST00000473257 PLEKHG2Q9H7P9 1386 aa15.28■□□□□ 0.04
ACTB-209ENST00000473257 CC2D1BQ5T0F9 858 aaKnown RBP15.28■□□□□ 0.04
ACTB-209ENST00000473257 SCN11AQ9UI33 1791 aa15.27■□□□□ 0.04
ACTB-209ENST00000473257 C9orf131Q5VYM1 1079 aa15.27■□□□□ 0.04
ACTB-209ENST00000473257 USPL1Q5W0Q7 1092 aa15.27■□□□□ 0.04
ACTB-209ENST00000473257 SLC52A2Q9HAB3 445 aa15.27■□□□□ 0.04
ACTB-209ENST00000473257 ADAMTS7Q9UKP4 1686 aa15.26■□□□□ 0.03
ACTB-209ENST00000473257 RNMTO43148 476 aaKnown RBP15.26■□□□□ 0.03
ACTB-209ENST00000473257 MTHFSDQ2M296 383 aaKnown RBP15.26■□□□□ 0.03
ACTB-209ENST00000473257 AKAP4Q5JQC9 854 aa15.26■□□□□ 0.03
ACTB-209ENST00000473257 BRCA1P38398 1863 aaKnown RBP15.26■□□□□ 0.03
ACTB-209ENST00000473257 POLRMTO00411 1230 aaKnown RBP15.25■□□□□ 0.03
ACTB-209ENST00000473257 CYP19A1P11511 503 aaPredicted RBP15.25■□□□□ 0.03
ACTB-209ENST00000473257 SOS1Q07889 1333 aaPredicted RBP15.24■□□□□ 0.03
ACTB-209ENST00000473257 KCPQ6ZWJ8 1503 aa15.24■□□□□ 0.03
ACTB-209ENST00000473257 PIM2Q9P1W9 311 aa15.24■□□□□ 0.03
ACTB-209ENST00000473257 ZBTB1Q9Y2K1 713 aa15.24■□□□□ 0.03
ACTB-209ENST00000473257 TM4SF1P30408 202 aa15.23■□□□□ 0.03
ACTB-209ENST00000473257 HTRA3P83110 453 aa15.23■□□□□ 0.03
ACTB-209ENST00000473257 DALRD3Q5D0E6 543 aaKnown RBP15.23■□□□□ 0.03
ACTB-209ENST00000473257 ZPR1O75312 459 aa15.22■□□□□ 0.03
ACTB-209ENST00000473257 RASSF7Q02833 373 aa15.22■□□□□ 0.03
ACTB-209ENST00000473257 NFIXQ14938 502 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms