RNA–Protein interactions for RNA: ENST00000473007.7

UBE2D4-210, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-210ENST00000473007 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.69□□□□□ -1.5
UBE2D4-210ENST00000473007 DEPDC5O75140 1603 aa5.69□□□□□ -1.5
UBE2D4-210ENST00000473007 COL17A1Q9UMD9 1497 aaPredicted RBP5.69□□□□□ -1.5
UBE2D4-210ENST00000473007 DIP2CQ9Y2E4 1556 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 SCAPERQ9BY12 1400 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 ABCA6Q8N139 1617 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 RNF17Q9BXT8 1623 aaKnown RBP5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 C21orf2O43822 256 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 FBXO45P0C2W1 286 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 GTF2F1P35269 517 aaKnown RBP eCLIP5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 GCGRP47871 477 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 IGBP1P78318 339 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 PTPROQ16827 1216 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 TICAM2Q86XR7 235 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 RNF135Q8IUD6 432 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 RGL4Q8IZJ4 473 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 ZNF526Q8TF50 670 aaPredicted RBP5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 HLA-CQ95604 372 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 SPACA7Q96KW9 195 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 KCNH8Q96L42 1107 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 METTL14Q9HCE5 456 aaKnown RBP5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 SLC52A1Q9NWF4 448 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 NLRP2Q9NX02 1062 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 CFDP1Q9UEE9 299 aaPredicted RBP5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 ARHGEF12Q9NZN5 1544 aa5.68□□□□□ -1.5
UBE2D4-210ENST00000473007 ROCK1Q13464 1354 aa5.67□□□□□ -1.5
UBE2D4-210ENST00000473007 GCC2Q8IWJ2 1684 aa5.67□□□□□ -1.5
UBE2D4-210ENST00000473007 ATP10AO60312 1499 aa5.67□□□□□ -1.5
UBE2D4-210ENST00000473007 CLSTN1O94985 981 aa5.67□□□□□ -1.5
UBE2D4-210ENST00000473007 HSPA2P54652 639 aa5.67□□□□□ -1.5
UBE2D4-210ENST00000473007 ARHGAP4P98171 946 aa5.67□□□□□ -1.5
UBE2D4-210ENST00000473007 NCOA4Q13772 614 aa5.67□□□□□ -1.5
UBE2D4-210ENST00000473007 PIP4P2Q8N4L2 257 aa5.67□□□□□ -1.5
UBE2D4-210ENST00000473007 TMEM87AQ8NBN3 555 aa5.67□□□□□ -1.5
UBE2D4-210ENST00000473007 TGIF2Q9GZN2 237 aa5.67□□□□□ -1.5
UBE2D4-210ENST00000473007 PIF1Q9H611 641 aa5.67□□□□□ -1.5
UBE2D4-210ENST00000473007 CXXC1Q9P0U4 656 aaPredicted RBP5.67□□□□□ -1.5
UBE2D4-210ENST00000473007 DUOX2Q9NRD8 1548 aa5.67□□□□□ -1.5
UBE2D4-210ENST00000473007 C9orf84Q5VXU9 1444 aa5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 ADAMTSL3P82987 1691 aa5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 KDM5DQ9BY66 1539 aa5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 ZBBXA8MT70 800 aa5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 C3orf80F5H4A9 247 aa5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 PER1O15534 1290 aaPredicted RBP5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 PRMT3O60678 531 aa5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 RBL2Q08999 1139 aa5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 OCLNQ16625 522 aa5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 NLGN1Q8N2Q7 840 aa5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 KCNB2Q92953 911 aa5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 ZDHHC16Q969W1 377 aa5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 GMLQ99445 158 aa5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 PRDM16Q9HAZ2 1276 aa5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 CAPN10Q9HC96 672 aa5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 IQSEC3Q9UPP2 1182 aaPredicted RBP5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 KDM5AP29375 1690 aaKnown RBP5.66□□□□□ -1.5
UBE2D4-210ENST00000473007 ERBINQ96RT1 1412 aa5.65□□□□□ -1.5
UBE2D4-210ENST00000473007 FER1L4A9Z1Z3 1794 aa5.65□□□□□ -1.5
UBE2D4-210ENST00000473007 PRDM15P57071 1507 aaPredicted RBP5.65□□□□□ -1.5
UBE2D4-210ENST00000473007 hCG_2014768A0A024R1R8 64 aa5.65□□□□□ -1.5
UBE2D4-210ENST00000473007 TPD52L2O43399 206 aaKnown RBP5.65□□□□□ -1.5
UBE2D4-210ENST00000473007 P4HBP07237 508 aaKnown RBP5.65□□□□□ -1.5
UBE2D4-210ENST00000473007 FKBP4Q02790 459 aaKnown RBP eCLIP5.65□□□□□ -1.5
UBE2D4-210ENST00000473007 CCDC181Q5TID7 509 aa5.65□□□□□ -1.5
UBE2D4-210ENST00000473007 NUDT18Q6ZVK8 323 aa5.65□□□□□ -1.5
UBE2D4-210ENST00000473007 OGFOD1Q8N543 542 aa5.65□□□□□ -1.5
UBE2D4-210ENST00000473007 GTF3C2Q8WUA4 911 aaPredicted RBP5.65□□□□□ -1.5
UBE2D4-210ENST00000473007 VTI1AQ96AJ9 217 aa5.65□□□□□ -1.5
UBE2D4-210ENST00000473007 PRIMPOLQ96LW4 560 aa5.65□□□□□ -1.5
UBE2D4-210ENST00000473007 MYH16Q9H6N6 1097 aa5.65□□□□□ -1.5
UBE2D4-210ENST00000473007 DAPK1P53355 1430 aa5.65□□□□□ -1.51
UBE2D4-210ENST00000473007 C6orf229H3BNL8 230 aa5.64□□□□□ -1.51
UBE2D4-210ENST00000473007 TCEAL1Q15170 157 aa5.64□□□□□ -1.51
UBE2D4-210ENST00000473007 PHTF2Q8N3S3 785 aa5.64□□□□□ -1.51
UBE2D4-210ENST00000473007 PMFBP1Q8TBY8 1022 aa5.64□□□□□ -1.51
UBE2D4-210ENST00000473007 RNF34Q969K3 372 aa5.64□□□□□ -1.51
UBE2D4-210ENST00000473007 ADAM33Q9BZ11 813 aa5.64□□□□□ -1.51
UBE2D4-210ENST00000473007 ZSWIM4Q9H7M6 989 aa5.64□□□□□ -1.51
UBE2D4-210ENST00000473007 CCSER2Q9H7U1 834 aa5.64□□□□□ -1.51
UBE2D4-210ENST00000473007 METTL5Q9NRN9 209 aaKnown RBP5.64□□□□□ -1.51
UBE2D4-210ENST00000473007 KLHL42Q9P2K6 505 aa5.64□□□□□ -1.51
UBE2D4-210ENST00000473007 DNMT3AQ9Y6K1 912 aaPredicted RBP5.64□□□□□ -1.51
UBE2D4-210ENST00000473007 NCOA1Q15788 1441 aa5.64□□□□□ -1.51
UBE2D4-210ENST00000473007 CNTLNQ9NXG0 1405 aa5.64□□□□□ -1.51
UBE2D4-210ENST00000473007 TRAPPC8Q9Y2L5 1435 aa5.64□□□□□ -1.51
UBE2D4-210ENST00000473007 VWDEQ8N2E2 1590 aa5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 FMNL1O95466 1100 aaPredicted RBP5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 CLDN10P78369 228 aa5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 FANCCQ00597 558 aa5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 PSME1Q06323 249 aa5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 KCNH2Q12809 1159 aa5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 SF3B2Q13435 895 aaKnown RBP5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 TAF7LQ5H9L4 462 aa5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 ZNF594Q96JF6 807 aaPredicted RBP5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 BRINP2Q9C0B6 783 aa5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 ACBD3Q9H3P7 528 aa5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 CEP126Q9P2H0 1117 aa5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 SEPT3Q9UH03 358 aa5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 TSKSQ9UJT2 592 aa5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 PCDHGA4Q9Y5G9 962 aa5.63□□□□□ -1.51
UBE2D4-210ENST00000473007 ABCC5O15440 1437 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms