RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 BLMP54132 1417 aaPredicted RBP12.37□□□□□ -0.43
SMC4-214ENST00000472991 SMG6Q86US8 1419 aaKnown RBP12.37□□□□□ -0.43
SMC4-214ENST00000472991 AMPHP49418 695 aa12.37□□□□□ -0.43
SMC4-214ENST00000472991 ZNF687Q8N1G0 1237 aa12.37□□□□□ -0.43
SMC4-214ENST00000472991 QTRT2Q9H974 415 aaKnown RBP12.37□□□□□ -0.43
SMC4-214ENST00000472991 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
SMC4-214ENST00000472991 TRPC5Q9UL62 973 aaPredicted RBP12.37□□□□□ -0.43
SMC4-214ENST00000472991 AXIN2Q9Y2T1 843 aa12.37□□□□□ -0.43
SMC4-214ENST00000472991 EMILIN1Q9Y6C2 1016 aa12.37□□□□□ -0.43
SMC4-214ENST00000472991 FLT4P35916 1363 aa12.36□□□□□ -0.43
SMC4-214ENST00000472991 THSD7AQ9UPZ6 1657 aa12.35□□□□□ -0.43
SMC4-214ENST00000472991 CDK12Q9NYV4 1490 aaPredicted RBP12.35□□□□□ -0.43
SMC4-214ENST00000472991 KIF24Q5T7B8 1368 aa12.35□□□□□ -0.43
SMC4-214ENST00000472991 PARP4Q9UKK3 1724 aaKnown RBP12.35□□□□□ -0.43
SMC4-214ENST00000472991 HOXC9P31274 260 aa12.35□□□□□ -0.43
SMC4-214ENST00000472991 EVA1CP58658 441 aa12.35□□□□□ -0.43
SMC4-214ENST00000472991 VPS72Q15906 364 aa12.35□□□□□ -0.43
SMC4-214ENST00000472991 IP6K1Q92551 441 aa12.35□□□□□ -0.43
SMC4-214ENST00000472991 GPHNQ9NQX3 736 aaPredicted RBP12.35□□□□□ -0.43
SMC4-214ENST00000472991 CCDC9Q9Y3X0 531 aaKnown RBP12.35□□□□□ -0.43
SMC4-214ENST00000472991 PCDHGA4Q9Y5G9 962 aa12.35□□□□□ -0.43
SMC4-214ENST00000472991 CRB1P82279 1406 aa12.35□□□□□ -0.43
SMC4-214ENST00000472991 PPM1GO15355 546 aaPredicted RBP12.34□□□□□ -0.43
SMC4-214ENST00000472991 FOXK1P85037 733 aa12.34□□□□□ -0.43
SMC4-214ENST00000472991 LARP1Q6PKG0 1096 aaKnown RBP12.34□□□□□ -0.43
SMC4-214ENST00000472991 POLKQ9UBT6 870 aa12.34□□□□□ -0.43
SMC4-214ENST00000472991 SPATA31A5Q5VU36 1347 aa12.34□□□□□ -0.43
SMC4-214ENST00000472991 SPATA31A7Q8IWB4 1347 aa12.34□□□□□ -0.43
SMC4-214ENST00000472991 WDR17Q8IZU2 1322 aa12.34□□□□□ -0.43
SMC4-214ENST00000472991 INSRP06213 1382 aa12.33□□□□□ -0.44
SMC4-214ENST00000472991 NUDT7P0C024 238 aa12.33□□□□□ -0.44
SMC4-214ENST00000472991 CSB-PGBD3P0DP91 1061 aa12.33□□□□□ -0.44
SMC4-214ENST00000472991 RBM6P78332 1123 aaKnown RBP12.33□□□□□ -0.44
SMC4-214ENST00000472991 ANKRD24Q8TF21 1146 aa12.33□□□□□ -0.44
SMC4-214ENST00000472991 LTV1Q96GA3 475 aaPredicted RBP12.33□□□□□ -0.44
SMC4-214ENST00000472991 GJD4Q96KN9 370 aaPredicted RBP12.33□□□□□ -0.44
SMC4-214ENST00000472991 RGS12O14924 1447 aa12.33□□□□□ -0.44
SMC4-214ENST00000472991 RGPD1P0DJD0 1748 aa12.33□□□□□ -0.44
SMC4-214ENST00000472991 SPATA31A1Q5TZJ5 1347 aa12.33□□□□□ -0.44
SMC4-214ENST00000472991 LRRC37A3O60309 1634 aa12.33□□□□□ -0.44
SMC4-214ENST00000472991 PARD3Q8TEW0 1356 aa12.32□□□□□ -0.44
SMC4-214ENST00000472991 RXRBP28702 533 aa12.32□□□□□ -0.44
SMC4-214ENST00000472991 HSP90AB2PQ58FF8 381 aa12.32□□□□□ -0.44
SMC4-214ENST00000472991 TOM1L2Q6ZVM7 507 aa12.31□□□□□ -0.44
SMC4-214ENST00000472991 USP35Q9P2H5 1018 aa12.31□□□□□ -0.44
SMC4-214ENST00000472991 SHANK3Q9BYB0 1731 aa12.31□□□□□ -0.44
SMC4-214ENST00000472991 COL3A1P02461 1466 aaPredicted RBP12.3□□□□□ -0.44
SMC4-214ENST00000472991 DSG2Q14126 1118 aa12.3□□□□□ -0.44
SMC4-214ENST00000472991 PLPP6Q8IY26 295 aa12.3□□□□□ -0.44
SMC4-214ENST00000472991 GTPBP6O43824 516 aaPredicted RBP12.29□□□□□ -0.44
SMC4-214ENST00000472991 MTHFSP49914 203 aa12.29□□□□□ -0.44
SMC4-214ENST00000472991 FAM98CQ17RN3 349 aaKnown RBP12.29□□□□□ -0.44
SMC4-214ENST00000472991 NLRP2Q9NX02 1062 aa12.29□□□□□ -0.44
SMC4-214ENST00000472991 VIRMAQ69YN4 1812 aaKnown RBP12.28□□□□□ -0.44
SMC4-214ENST00000472991 A0A0G2JS52 829 aa12.28□□□□□ -0.44
SMC4-214ENST00000472991 MYT1Q01538 1121 aa12.28□□□□□ -0.44
SMC4-214ENST00000472991 ILDR2Q71H61 639 aa12.28□□□□□ -0.44
SMC4-214ENST00000472991 TCP11L2Q8N4U5 519 aa12.28□□□□□ -0.44
SMC4-214ENST00000472991 PTCD2Q8WV60 388 aaKnown RBP12.28□□□□□ -0.44
SMC4-214ENST00000472991 CARD10Q9BWT7 1032 aa12.28□□□□□ -0.44
SMC4-214ENST00000472991 PKD1L3Q7Z443 1732 aa12.28□□□□□ -0.44
SMC4-214ENST00000472991 KAT6BQ8WYB5 2073 aa12.28□□□□□ -0.44
SMC4-214ENST00000472991 DISP2A7MBM2 1401 aa12.28□□□□□ -0.44
SMC4-214ENST00000472991 PPP2R1AP30153 589 aa12.27□□□□□ -0.45
SMC4-214ENST00000472991 EIF4A2Q14240 407 aaKnown RBP12.27□□□□□ -0.45
SMC4-214ENST00000472991 LHX6Q9UPM6 363 aa12.27□□□□□ -0.45
SMC4-214ENST00000472991 SBF2Q86WG5 1849 aa12.26□□□□□ -0.45
SMC4-214ENST00000472991 RALBP1Q15311 655 aa12.26□□□□□ -0.45
SMC4-214ENST00000472991 BARGINQ6ZT62 677 aa12.26□□□□□ -0.45
SMC4-214ENST00000472991 USHBP1Q8N6Y0 703 aa12.26□□□□□ -0.45
SMC4-214ENST00000472991 CRISPLD2Q9H0B8 497 aa12.26□□□□□ -0.45
SMC4-214ENST00000472991 THRAP3Q9Y2W1 955 aaKnown RBP12.26□□□□□ -0.45
SMC4-214ENST00000472991 NCAPD2Q15021 1401 aa12.26□□□□□ -0.45
SMC4-214ENST00000472991 NBPF6Q5VWK0 638 aa12.25□□□□□ -0.45
SMC4-214ENST00000472991 SEPT12Q8IYM1 358 aa12.25□□□□□ -0.45
SMC4-214ENST00000472991 NBPF4Q96M43 638 aa12.25□□□□□ -0.45
SMC4-214ENST00000472991 MEGF6O75095 1541 aa12.25□□□□□ -0.45
SMC4-214ENST00000472991 ONECUT3O60422 494 aaPredicted RBP12.24□□□□□ -0.45
SMC4-214ENST00000472991 PRKRIP1Q9H875 184 aaPredicted RBP12.24□□□□□ -0.45
SMC4-214ENST00000472991 TNS2Q63HR2 1409 aa12.23□□□□□ -0.45
SMC4-214ENST00000472991 IGSF1Q8N6C5 1336 aa12.23□□□□□ -0.45
SMC4-214ENST00000472991 MYBBP1AQ9BQG0 1328 aaKnown RBP12.23□□□□□ -0.45
SMC4-214ENST00000472991 EYA1Q99502 592 aa12.23□□□□□ -0.45
SMC4-214ENST00000472991 EP400Q96L91 3159 aa12.23□□□□□ -0.45
SMC4-214ENST00000472991 DIAPH1O60610 1272 aaKnown RBP12.22□□□□□ -0.45
SMC4-214ENST00000472991 IL2RBP14784 551 aa12.22□□□□□ -0.45
SMC4-214ENST00000472991 IL13P35225 146 aa12.22□□□□□ -0.45
SMC4-214ENST00000472991 CFAP53Q96M91 514 aa12.22□□□□□ -0.45
SMC4-214ENST00000472991 DOT1LQ8TEK3 1739 aa12.22□□□□□ -0.45
SMC4-214ENST00000472991 OVOS2A0A0G2JMS6 1433 aa12.21□□□□□ -0.45
SMC4-214ENST00000472991 CDCA7Q9BWT1 371 aaPredicted RBP12.21□□□□□ -0.45
SMC4-214ENST00000472991 DLG5Q8TDM6 1919 aa12.21□□□□□ -0.46
SMC4-214ENST00000472991 TNS1Q9HBL0 1735 aaKnown RBP12.2□□□□□ -0.46
SMC4-214ENST00000472991 DDB1Q16531 1140 aa12.2□□□□□ -0.46
SMC4-214ENST00000472991 ITGB4P16144 1822 aa12.2□□□□□ -0.46
SMC4-214ENST00000472991 ANP32CO43423 234 aa12.19□□□□□ -0.46
SMC4-214ENST00000472991 TATP17735 454 aaPredicted RBP12.19□□□□□ -0.46
SMC4-214ENST00000472991 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
SMC4-214ENST00000472991 AEBP1Q8IUX7 1158 aa12.19□□□□□ -0.46
SMC4-214ENST00000472991 RAPGEF4Q8WZA2 1011 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms