RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 GNPATO15228 680 aa26.01■■□□□ 1.75
COMMD1-208ENST00000472729 PTCD1O75127 700 aaKnown RBP26.01■■□□□ 1.75
COMMD1-208ENST00000472729 LINC00116Q8NCU8 138 aa26.01■■□□□ 1.75
COMMD1-208ENST00000472729 GAS2L2Q8NHY3 880 aa26.01■■□□□ 1.75
COMMD1-208ENST00000472729 SGIP1Q9BQI5 828 aa26.01■■□□□ 1.75
COMMD1-208ENST00000472729 SYT17Q9BSW7 474 aa26.01■■□□□ 1.75
COMMD1-208ENST00000472729 LY75O60449 1722 aa26■■□□□ 1.75
COMMD1-208ENST00000472729 KDM6AO15550 1401 aaPredicted RBP26■■□□□ 1.75
COMMD1-208ENST00000472729 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26■■□□□ 1.75
COMMD1-208ENST00000472729 U2AF1L5P0DN76 240 aaPredicted RBP26■■□□□ 1.75
COMMD1-208ENST00000472729 U2AF1Q01081 240 aaKnown RBP eCLIP26■■□□□ 1.75
COMMD1-208ENST00000472729 SSFA2P28290 1259 aa25.99■■□□□ 1.75
COMMD1-208ENST00000472729 SLC52A2Q9HAB3 445 aa25.99■■□□□ 1.75
COMMD1-208ENST00000472729 TOGARAM1Q9Y4F4 1720 aa25.98■■□□□ 1.75
COMMD1-208ENST00000472729 RNMTO43148 476 aaKnown RBP25.98■■□□□ 1.75
COMMD1-208ENST00000472729 ITPK1Q13572 414 aa25.98■■□□□ 1.75
COMMD1-208ENST00000472729 MSL1Q68DK7 614 aa25.98■■□□□ 1.75
COMMD1-208ENST00000472729 LGR6Q9HBX8 967 aa25.97■■□□□ 1.75
COMMD1-208ENST00000472729 RTCBQ9Y3I0 505 aaKnown RBP25.97■■□□□ 1.75
COMMD1-208ENST00000472729 NEFMP07197 916 aa25.96■■□□□ 1.75
COMMD1-208ENST00000472729 GNAT3A8MTJ3 354 aa25.95■■□□□ 1.74
COMMD1-208ENST00000472729 PRKAR2BP31323 418 aa25.95■■□□□ 1.74
COMMD1-208ENST00000472729 TRAPPC3LQ5T215 181 aa25.94■■□□□ 1.74
COMMD1-208ENST00000472729 TEFQ10587 303 aa25.93■■□□□ 1.74
COMMD1-208ENST00000472729 DDX10Q13206 875 aaKnown RBP25.92■■□□□ 1.74
COMMD1-208ENST00000472729 RC3H1Q5TC82 1133 aaKnown RBP25.92■■□□□ 1.74
COMMD1-208ENST00000472729 TTC5Q8N0Z6 440 aa25.92■■□□□ 1.74
COMMD1-208ENST00000472729 ITGB4P16144 1822 aa25.92■■□□□ 1.74
COMMD1-208ENST00000472729 COL3A1P02461 1466 aaPredicted RBP25.91■■□□□ 1.74
COMMD1-208ENST00000472729 FCHSD2O94868 740 aa25.91■■□□□ 1.74
COMMD1-208ENST00000472729 ZEB1P37275 1124 aaPredicted RBP25.91■■□□□ 1.74
COMMD1-208ENST00000472729 C5P01031 1676 aa25.9■■□□□ 1.74
COMMD1-208ENST00000472729 RFC4P35249 363 aa25.9■■□□□ 1.74
COMMD1-208ENST00000472729 RTF1Q92541 710 aaKnown RBP25.9■■□□□ 1.74
COMMD1-208ENST00000472729 MAP3K5Q99683 1374 aa25.9■■□□□ 1.74
COMMD1-208ENST00000472729 ADRA2BP18089 450 aa25.89■■□□□ 1.74
COMMD1-208ENST00000472729 SMIM5Q71RC9 77 aa25.89■■□□□ 1.74
COMMD1-208ENST00000472729 SLC4A9Q96Q91 983 aa25.89■■□□□ 1.74
COMMD1-208ENST00000472729 RSPH6AQ9H0K4 717 aa25.89■■□□□ 1.74
COMMD1-208ENST00000472729 C4BP0C0L5 1744 aa25.88■■□□□ 1.73
COMMD1-208ENST00000472729 RALBP1Q15311 655 aa25.88■■□□□ 1.73
COMMD1-208ENST00000472729 GPR162Q16538 588 aa25.88■■□□□ 1.73
COMMD1-208ENST00000472729 PELP1Q8IZL8 1130 aaKnown RBP25.88■■□□□ 1.73
COMMD1-208ENST00000472729 CNTNAP4Q9C0A0 1308 aa25.88■■□□□ 1.73
COMMD1-208ENST00000472729 SLC39A6Q13433 755 aa25.87■■□□□ 1.73
COMMD1-208ENST00000472729 RPS6KA4O75676 772 aa25.86■■□□□ 1.73
COMMD1-208ENST00000472729 AMIGO3Q86WK7 504 aa25.86■■□□□ 1.73
COMMD1-208ENST00000472729 PHACTR3Q96KR7 559 aa25.86■■□□□ 1.73
COMMD1-208ENST00000472729 PNNQ9H307 717 aaKnown RBP25.86■■□□□ 1.73
COMMD1-208ENST00000472729 CRKLP46109 303 aaKnown RBP25.85■■□□□ 1.73
COMMD1-208ENST00000472729 QSER1Q2KHR3 1735 aa25.85■■□□□ 1.73
COMMD1-208ENST00000472729 YY1P25490 414 aa25.84■■□□□ 1.73
COMMD1-208ENST00000472729 NLGN1Q8N2Q7 840 aa25.84■■□□□ 1.73
COMMD1-208ENST00000472729 ARHGEF1Q92888 912 aaKnown RBP25.83■■□□□ 1.73
COMMD1-208ENST00000472729 IL17REQ8NFR9 667 aa25.82■■□□□ 1.72
COMMD1-208ENST00000472729 CD2APQ9Y5K6 639 aa25.82■■□□□ 1.72
COMMD1-208ENST00000472729 DNAJC10Q8IXB1 793 aa25.81■■□□□ 1.72
COMMD1-208ENST00000472729 VSIG10Q8N0Z9 540 aa25.81■■□□□ 1.72
COMMD1-208ENST00000472729 STARD3NLO95772 234 aa25.8■■□□□ 1.72
COMMD1-208ENST00000472729 CCDC87Q9NVE4 849 aa25.8■■□□□ 1.72
COMMD1-208ENST00000472729 BTBD11A6QL63 1104 aa25.79■■□□□ 1.72
COMMD1-208ENST00000472729 MMP10P09238 476 aa25.78■■□□□ 1.72
COMMD1-208ENST00000472729 ZNF790Q6PG37 636 aa25.78■■□□□ 1.72
COMMD1-208ENST00000472729 NPM2Q86SE8 214 aaKnown RBP25.78■■□□□ 1.72
COMMD1-208ENST00000472729 NLGN2Q8NFZ4 835 aa25.78■■□□□ 1.72
COMMD1-208ENST00000472729 MAPK8IP3Q9UPT6 1336 aa25.78■■□□□ 1.72
COMMD1-208ENST00000472729 HTATSF1O43719 755 aaKnown RBP25.77■■□□□ 1.72
COMMD1-208ENST00000472729 ZPR1O75312 459 aa25.77■■□□□ 1.72
COMMD1-208ENST00000472729 TEX13AQ9BXU3 409 aaPredicted RBP25.77■■□□□ 1.72
COMMD1-208ENST00000472729 FMNL2Q96PY5 1086 aa25.76■■□□□ 1.71
COMMD1-208ENST00000472729 MRC1P22897 1456 aa25.76■■□□□ 1.71
COMMD1-208ENST00000472729 TAF1LQ8IZX4 1826 aa25.76■■□□□ 1.71
COMMD1-208ENST00000472729 TUBGCP6Q96RT7 1819 aa25.75■■□□□ 1.71
COMMD1-208ENST00000472729 CYP19A1P11511 503 aaPredicted RBP25.75■■□□□ 1.71
COMMD1-208ENST00000472729 INTS5Q6P9B9 1019 aaKnown RBP25.75■■□□□ 1.71
COMMD1-208ENST00000472729 PARP3Q9Y6F1 533 aa25.75■■□□□ 1.71
COMMD1-208ENST00000472729 MCM10Q7L590 875 aa25.74■■□□□ 1.71
COMMD1-208ENST00000472729 MYBBP1AQ9BQG0 1328 aaKnown RBP25.73■■□□□ 1.71
COMMD1-208ENST00000472729 GRIN3BO60391 1043 aa25.73■■□□□ 1.71
COMMD1-208ENST00000472729 GYS1P13807 737 aa25.72■■□□□ 1.71
COMMD1-208ENST00000472729 ZNF496Q96IT1 587 aaPredicted RBP25.72■■□□□ 1.71
COMMD1-208ENST00000472729 SCN11AQ9UI33 1791 aa25.72■■□□□ 1.71
COMMD1-208ENST00000472729 CEMIPQ8WUJ3 1361 aa25.71■■□□□ 1.71
COMMD1-208ENST00000472729 CANXP27824 592 aaKnown RBP25.71■■□□□ 1.71
COMMD1-208ENST00000472729 ZNF831Q5JPB2 1677 aa25.71■■□□□ 1.71
COMMD1-208ENST00000472729 USP42Q9H9J4 1324 aaKnown RBP25.69■■□□□ 1.7
COMMD1-208ENST00000472729 DCTN1Q14203 1278 aa25.69■■□□□ 1.7
COMMD1-208ENST00000472729 SRP68Q9UHB9 627 aaKnown RBP25.69■■□□□ 1.7
COMMD1-208ENST00000472729 ZNF330Q9Y3S2 320 aaPredicted RBP25.69■■□□□ 1.7
COMMD1-208ENST00000472729 A0A087WZG4 1122 aa25.68■■□□□ 1.7
COMMD1-208ENST00000472729 WDR43Q15061 677 aaKnown RBP eCLIP25.68■■□□□ 1.7
COMMD1-208ENST00000472729 ZBTB1Q9Y2K1 713 aa25.68■■□□□ 1.7
COMMD1-208ENST00000472729 UBR3Q6ZT12 1888 aa25.68■■□□□ 1.7
COMMD1-208ENST00000472729 HEG1Q9ULI3 1381 aa25.68■■□□□ 1.7
COMMD1-208ENST00000472729 SOS1Q07889 1333 aaPredicted RBP25.67■■□□□ 1.7
COMMD1-208ENST00000472729 TAF7Q15545 349 aaPredicted RBP25.67■■□□□ 1.7
COMMD1-208ENST00000472729 NFE2L2Q16236 605 aa25.66■■□□□ 1.7
COMMD1-208ENST00000472729 USPL1Q5W0Q7 1092 aa25.66■■□□□ 1.7
COMMD1-208ENST00000472729 PNISRQ8TF01 805 aaKnown RBP25.66■■□□□ 1.7
COMMD1-208ENST00000472729 KCPQ6ZWJ8 1503 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms