RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 FANCIQ9NVI1 1328 aa28.95■■■□□ 2.22
PAXBP1-208ENST00000472588 ERVV-2B6SEH9 535 aa28.94■■■□□ 2.22
PAXBP1-208ENST00000472588 SLC52A2Q9HAB3 445 aa28.93■■■□□ 2.22
PAXBP1-208ENST00000472588 SIPA1L3O60292 1781 aaPredicted RBP28.92■■■□□ 2.22
PAXBP1-208ENST00000472588 MRC1P22897 1456 aa28.92■■■□□ 2.22
PAXBP1-208ENST00000472588 KRT27Q7Z3Y8 459 aa28.92■■■□□ 2.22
PAXBP1-208ENST00000472588 MBIPQ9NS73 344 aa28.92■■■□□ 2.22
PAXBP1-208ENST00000472588 TSPYL4Q9UJ04 414 aa28.92■■■□□ 2.22
PAXBP1-208ENST00000472588 CABP4P57796 275 aa28.91■■■□□ 2.22
PAXBP1-208ENST00000472588 TSR2Q969E8 191 aaKnown RBP28.91■■■□□ 2.22
PAXBP1-208ENST00000472588 EP400Q96L91 3159 aa28.91■■■□□ 2.22
PAXBP1-208ENST00000472588 BTBD11A6QL63 1104 aa28.89■■■□□ 2.22
PAXBP1-208ENST00000472588 CT47B1P0C2W7 299 aaPredicted RBP28.88■■■□□ 2.21
PAXBP1-208ENST00000472588 MARCH10Q8NA82 808 aaPredicted RBP28.87■■■□□ 2.21
PAXBP1-208ENST00000472588 NFATC2IPQ8NCF5 419 aa28.87■■■□□ 2.21
PAXBP1-208ENST00000472588 UPF1Q92900 1129 aaKnown RBP eCLIP28.86■■■□□ 2.21
PAXBP1-208ENST00000472588 KDM3BQ7LBC6 1761 aa28.85■■■□□ 2.21
PAXBP1-208ENST00000472588 EXOSC9Q06265 439 aaKnown RBP28.85■■■□□ 2.21
PAXBP1-208ENST00000472588 MIS18AQ9NYP9 233 aa28.84■■■□□ 2.21
PAXBP1-208ENST00000472588 TOGARAM1Q9Y4F4 1720 aa28.83■■■□□ 2.21
PAXBP1-208ENST00000472588 TMOD3Q9NYL9 352 aa28.83■■■□□ 2.21
PAXBP1-208ENST00000472588 FAM182BQ5T319 152 aa28.81■■■□□ 2.2
PAXBP1-208ENST00000472588 ITGB4P16144 1822 aa28.81■■■□□ 2.2
PAXBP1-208ENST00000472588 DOT1LQ8TEK3 1739 aa28.81■■■□□ 2.2
PAXBP1-208ENST00000472588 ZNF428Q96B54 188 aa28.8■■■□□ 2.2
PAXBP1-208ENST00000472588 RCAN3Q9UKA8 241 aa28.8■■■□□ 2.2
PAXBP1-208ENST00000472588 SOS1Q07889 1333 aaPredicted RBP28.8■■■□□ 2.2
PAXBP1-208ENST00000472588 TTC5Q8N0Z6 440 aa28.79■■■□□ 2.2
PAXBP1-208ENST00000472588 BCL9O00512 1426 aa28.79■■■□□ 2.2
PAXBP1-208ENST00000472588 KAT6BQ8WYB5 2073 aa28.79■■■□□ 2.2
PAXBP1-208ENST00000472588 ZNF790Q6PG37 636 aa28.78■■■□□ 2.2
PAXBP1-208ENST00000472588 TWISTNBQ3B726 338 aaPredicted RBP28.77■■■□□ 2.2
PAXBP1-208ENST00000472588 CHMP4AQ9BY43 222 aa28.77■■■□□ 2.2
PAXBP1-208ENST00000472588 PRIM1P49642 420 aaKnown RBP28.75■■■□□ 2.19
PAXBP1-208ENST00000472588 EIF4A1P60842 406 aaKnown RBP28.75■■■□□ 2.19
PAXBP1-208ENST00000472588 SYTL4Q96C24 671 aaPredicted RBP28.75■■■□□ 2.19
PAXBP1-208ENST00000472588 C8orf58Q8NAV2 365 aa28.74■■■□□ 2.19
PAXBP1-208ENST00000472588 HOXB7P09629 217 aa28.73■■■□□ 2.19
PAXBP1-208ENST00000472588 PIGBQ92521 554 aa28.73■■■□□ 2.19
PAXBP1-208ENST00000472588 PAPPAQ13219 1627 aa28.73■■■□□ 2.19
PAXBP1-208ENST00000472588 VAMP4O75379 141 aa28.72■■■□□ 2.19
PAXBP1-208ENST00000472588 ELL2O00472 640 aaPredicted RBP28.71■■■□□ 2.19
PAXBP1-208ENST00000472588 SLC39A6Q13433 755 aa28.71■■■□□ 2.19
PAXBP1-208ENST00000472588 FAM196AQ6ZSG2 479 aa28.71■■■□□ 2.19
PAXBP1-208ENST00000472588 ACSBG1Q96GR2 724 aa28.71■■■□□ 2.19
PAXBP1-208ENST00000472588 FMNL2Q96PY5 1086 aa28.71■■■□□ 2.19
PAXBP1-208ENST00000472588 TSPYL6Q8N831 410 aa28.7■■■□□ 2.19
PAXBP1-208ENST00000472588 KCNQ3O43525 872 aa28.69■■■□□ 2.18
PAXBP1-208ENST00000472588 ALDH1L2Q3SY69 923 aa28.69■■■□□ 2.18
PAXBP1-208ENST00000472588 CCDC125Q86Z20 511 aa28.69■■■□□ 2.18
PAXBP1-208ENST00000472588 UBR2Q8IWV8 1755 aa28.69■■■□□ 2.18
PAXBP1-208ENST00000472588 SBF2Q86WG5 1849 aa28.69■■■□□ 2.18
PAXBP1-208ENST00000472588 HEG1Q9ULI3 1381 aa28.68■■■□□ 2.18
PAXBP1-208ENST00000472588 RARSP54136 660 aaKnown RBP28.68■■■□□ 2.18
PAXBP1-208ENST00000472588 TNS1Q9HBL0 1735 aaKnown RBP28.68■■■□□ 2.18
PAXBP1-208ENST00000472588 NHSQ6T4R5 1651 aa28.67■■■□□ 2.18
PAXBP1-208ENST00000472588 KRT24Q2M2I5 525 aa28.67■■■□□ 2.18
PAXBP1-208ENST00000472588 ZNF496Q96IT1 587 aaPredicted RBP28.66■■■□□ 2.18
PAXBP1-208ENST00000472588 SUPT16HQ9Y5B9 1047 aaKnown RBP28.66■■■□□ 2.18
PAXBP1-208ENST00000472588 GIGYF1O75420 1035 aaPredicted RBP28.65■■■□□ 2.18
PAXBP1-208ENST00000472588 ATG3Q9NT62 314 aa28.65■■■□□ 2.18
PAXBP1-208ENST00000472588 SNRPA1P09661 255 aaKnown RBP28.64■■■□□ 2.18
PAXBP1-208ENST00000472588 CCDC30Q5VVM6 783 aa28.64■■■□□ 2.18
PAXBP1-208ENST00000472588 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.64■■■□□ 2.18
PAXBP1-208ENST00000472588 SMARCC1Q92922 1105 aaPredicted RBP28.64■■■□□ 2.18
PAXBP1-208ENST00000472588 ASAP1Q9ULH1 1129 aa28.64■■■□□ 2.18
PAXBP1-208ENST00000472588 SF3B2Q13435 895 aaKnown RBP28.63■■■□□ 2.17
PAXBP1-208ENST00000472588 TRIM37O94972 964 aa28.62■■■□□ 2.17
PAXBP1-208ENST00000472588 VSIG10Q8N0Z9 540 aa28.62■■■□□ 2.17
PAXBP1-208ENST00000472588 SMC4Q9NTJ3 1288 aa28.62■■■□□ 2.17
PAXBP1-208ENST00000472588 KCPQ6ZWJ8 1503 aa28.62■■■□□ 2.17
PAXBP1-208ENST00000472588 KCNQ2O43526 872 aa28.61■■■□□ 2.17
PAXBP1-208ENST00000472588 SSH1Q8WYL5 1049 aa28.61■■■□□ 2.17
PAXBP1-208ENST00000472588 HDGFL1Q5TGJ6 251 aa28.6■■■□□ 2.17
PAXBP1-208ENST00000472588 STK31Q9BXU1 1019 aa28.6■■■□□ 2.17
PAXBP1-208ENST00000472588 TEX13AQ9BXU3 409 aaPredicted RBP28.6■■■□□ 2.17
PAXBP1-208ENST00000472588 CACNA1FO60840 1977 aa28.6■■■□□ 2.17
PAXBP1-208ENST00000472588 PTCD1O75127 700 aaKnown RBP28.6■■■□□ 2.17
PAXBP1-208ENST00000472588 BRPF1P55201 1214 aaPredicted RBP28.6■■■□□ 2.17
PAXBP1-208ENST00000472588 RNF123Q5XPI4 1314 aa28.59■■■□□ 2.17
PAXBP1-208ENST00000472588 BCAR3O75815 825 aa28.59■■■□□ 2.17
PAXBP1-208ENST00000472588 BCL11BQ9C0K0 894 aaPredicted RBP28.59■■■□□ 2.17
PAXBP1-208ENST00000472588 BTAF1O14981 1849 aa28.58■■■□□ 2.17
PAXBP1-208ENST00000472588 KIF16BQ96L93 1317 aa28.58■■■□□ 2.17
PAXBP1-208ENST00000472588 RBM42Q9BTD8 480 aaKnown RBP28.57■■■□□ 2.16
PAXBP1-208ENST00000472588 LAMB4A4D0S4 1761 aa28.57■■■□□ 2.16
PAXBP1-208ENST00000472588 EIF2S2P20042 333 aaKnown RBP28.56■■■□□ 2.16
PAXBP1-208ENST00000472588 RRP1P56182 461 aaKnown RBP28.56■■■□□ 2.16
PAXBP1-208ENST00000472588 BCL2L13Q9BXK5 485 aa28.56■■■□□ 2.16
PAXBP1-208ENST00000472588 C5P01031 1676 aa28.56■■■□□ 2.16
PAXBP1-208ENST00000472588 CANXP27824 592 aaKnown RBP28.55■■■□□ 2.16
PAXBP1-208ENST00000472588 DEFB132Q7Z7B7 95 aa28.55■■■□□ 2.16
PAXBP1-208ENST00000472588 PALLDQ8WX93 1383 aa28.55■■■□□ 2.16
PAXBP1-208ENST00000472588 IPO8O15397 1037 aaKnown RBP28.54■■■□□ 2.16
PAXBP1-208ENST00000472588 MRPL50Q8N5N7 158 aaKnown RBP28.54■■■□□ 2.16
PAXBP1-208ENST00000472588 BAG6P46379 1132 aa28.53■■■□□ 2.16
PAXBP1-208ENST00000472588 DBF4Q9UBU7 674 aaPredicted RBP28.53■■■□□ 2.16
PAXBP1-208ENST00000472588 SLC4A2P04920 1241 aa28.52■■■□□ 2.16
PAXBP1-208ENST00000472588 NEFLP07196 543 aa28.52■■■□□ 2.16
PAXBP1-208ENST00000472588 ZNF831Q5JPB2 1677 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms