RNA–Protein interactions for RNA: ENST00000472278.1

LRRTM3-202, Transcript of leucine rich repeat transmembrane neuronal 3, humanhuman

TSL 2

Gene LRRTM3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3-202ENST00000472278 PHTF2Q8N3S3 785 aa3.76□□□□□ -1.81
LRRTM3-202ENST00000472278 PLPP7Q8NBV4 271 aa3.76□□□□□ -1.81
LRRTM3-202ENST00000472278 FAM174AQ8TBP5 190 aa3.76□□□□□ -1.81
LRRTM3-202ENST00000472278 TRIM52Q96A61 297 aa3.76□□□□□ -1.81
LRRTM3-202ENST00000472278 C1QTNF2Q9BXJ5 285 aa3.76□□□□□ -1.81
LRRTM3-202ENST00000472278 CARD14Q9BXL6 1004 aa3.76□□□□□ -1.81
LRRTM3-202ENST00000472278 CHIC2Q9UKJ5 165 aa3.76□□□□□ -1.81
LRRTM3-202ENST00000472278 ATP1A2P50993 1020 aa3.75□□□□□ -1.81
LRRTM3-202ENST00000472278 KCNA1Q09470 495 aa3.75□□□□□ -1.81
LRRTM3-202ENST00000472278 NCOA4Q13772 614 aa3.75□□□□□ -1.81
LRRTM3-202ENST00000472278 LARP1Q6PKG0 1096 aaKnown RBP3.75□□□□□ -1.81
LRRTM3-202ENST00000472278 AEBP1Q8IUX7 1158 aa3.75□□□□□ -1.81
LRRTM3-202ENST00000472278 SEPT12Q8IYM1 358 aa3.75□□□□□ -1.81
LRRTM3-202ENST00000472278 MEIOBQ8N635 442 aa3.75□□□□□ -1.81
LRRTM3-202ENST00000472278 SIRT1Q96EB6 747 aa3.75□□□□□ -1.81
LRRTM3-202ENST00000472278 MKRN1Q9UHC7 482 aaKnown RBP3.75□□□□□ -1.81
LRRTM3-202ENST00000472278 DOLKQ9UPQ8 538 aa3.75□□□□□ -1.81
LRRTM3-202ENST00000472278 SLC35F4A4IF30 521 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 USP17L15C9J2P7 530 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 USP17L10C9JJH3 530 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 USP17L13C9JLJ4 530 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 USP17L12C9JPN9 530 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 USP17L11C9JVI0 530 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 USP17L21D6R901 530 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 USP17L18D6R9N7 530 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 USP17L22D6RA61 530 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 USP17L17D6RBQ6 530 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 USP17L19D6RCP7 530 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 USP17L20D6RJB6 530 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 ITGA6P23229 1130 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 VARSP26640 1264 aaKnown RBP3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 GRM5P41594 1212 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 USP17L24Q0WX57 530 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 ARID5BQ14865 1188 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 FOXD4L6Q3SYB3 417 aaPredicted RBP3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 FOXD4L3Q6VB84 417 aaPredicted RBP3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 FOXJ1Q92949 421 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 CUEDC1Q9NWM3 386 aaPredicted RBP3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 NOVA2Q9UNW9 492 aaKnown RBP3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 NOD1Q9Y239 953 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 CCDC9Q9Y3X0 531 aaKnown RBP3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 MAP4K5Q9Y4K4 846 aa3.74□□□□□ -1.81
LRRTM3-202ENST00000472278 TMEM88BA6NKF7 163 aa3.73□□□□□ -1.81
LRRTM3-202ENST00000472278 TTLL8A6PVC2 850 aa3.73□□□□□ -1.81
LRRTM3-202ENST00000472278 ESPNB1AK53 854 aa3.73□□□□□ -1.81
LRRTM3-202ENST00000472278 RASA1P20936 1047 aa3.73□□□□□ -1.81
LRRTM3-202ENST00000472278 CDCA8Q53HL2 280 aa3.73□□□□□ -1.81
LRRTM3-202ENST00000472278 C4orf48Q5BLP8 95 aa3.73□□□□□ -1.81
LRRTM3-202ENST00000472278 DEPDC4Q8N2C3 294 aa3.73□□□□□ -1.81
LRRTM3-202ENST00000472278 LARGE2Q8N3Y3 721 aa3.73□□□□□ -1.81
LRRTM3-202ENST00000472278 MPNDQ8N594 471 aa3.73□□□□□ -1.81
LRRTM3-202ENST00000472278 RBM19Q9Y4C8 960 aaKnown RBP3.73□□□□□ -1.81
LRRTM3-202ENST00000472278 SENP3-EIF4A1A0A087X0R7 540 aa3.72□□□□□ -1.81
LRRTM3-202ENST00000472278 GIGYF1O75420 1035 aaPredicted RBP3.72□□□□□ -1.81
LRRTM3-202ENST00000472278 COL8A1P27658 744 aa3.72□□□□□ -1.81
LRRTM3-202ENST00000472278 USP4Q13107 963 aa3.72□□□□□ -1.81
LRRTM3-202ENST00000472278 PTK7Q13308 1070 aa3.72□□□□□ -1.81
LRRTM3-202ENST00000472278 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.72□□□□□ -1.81
LRRTM3-202ENST00000472278 CRTC2Q53ET0 693 aaPredicted RBP3.72□□□□□ -1.81
LRRTM3-202ENST00000472278 LCE1DQ5T752 114 aa3.72□□□□□ -1.81
LRRTM3-202ENST00000472278 TMEM164Q5U3C3 297 aa3.72□□□□□ -1.81
LRRTM3-202ENST00000472278 FAM200AQ8TCP9 573 aa3.72□□□□□ -1.81
LRRTM3-202ENST00000472278 CCDC85AQ96PX6 553 aaPredicted RBP3.72□□□□□ -1.81
LRRTM3-202ENST00000472278 CDCA7Q9BWT1 371 aaPredicted RBP3.72□□□□□ -1.81
LRRTM3-202ENST00000472278 DNAAF2Q9NVR5 837 aaKnown RBP3.72□□□□□ -1.81
LRRTM3-202ENST00000472278 ZMIZ1Q9ULJ6 1067 aa3.72□□□□□ -1.81
LRRTM3-202ENST00000472278 MYCP01106 439 aaPredicted RBP3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 SNRPNP63162 240 aaKnown RBP3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 GTF2IP78347 998 aa3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 MAP3K10Q02779 954 aa3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 DHX9Q08211 1270 aaKnown RBP3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 SWI5Q1ZZU3 235 aa3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 OXLD1Q5BKU9 147 aa3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 SV2AQ7L0J3 742 aa3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 VASH1Q7L8A9 365 aaPredicted RBP3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 ANKMY2Q8IV38 441 aa3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 SIX5Q8N196 739 aa3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 OGFOD1Q8N543 542 aa3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 STK32AQ8WU08 396 aa3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 CLP1Q92989 425 aaKnown RBP3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 CDK15Q96Q40 435 aa3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 KCTD15Q96SI1 283 aaPredicted RBP3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 PCDHB11Q9Y5F2 797 aa3.71□□□□□ -1.82
LRRTM3-202ENST00000472278 SRSF11Q05519 484 aaKnown RBP3.7□□□□□ -1.82
LRRTM3-202ENST00000472278 DPYDQ12882 1025 aa3.7□□□□□ -1.82
LRRTM3-202ENST00000472278 BEND7Q8N7W2 519 aaPredicted RBP3.7□□□□□ -1.82
LRRTM3-202ENST00000472278 ESF1Q9H501 851 aaKnown RBP3.7□□□□□ -1.82
LRRTM3-202ENST00000472278 GNEQ9Y223 722 aaKnown RBP3.7□□□□□ -1.82
LRRTM3-202ENST00000472278 PHF20L1A8MW92 1017 aa3.69□□□□□ -1.82
LRRTM3-202ENST00000472278 SEC13P55735 322 aa3.69□□□□□ -1.82
LRRTM3-202ENST00000472278 CLDN10P78369 228 aa3.69□□□□□ -1.82
LRRTM3-202ENST00000472278 PSME1Q06323 249 aa3.69□□□□□ -1.82
LRRTM3-202ENST00000472278 CBLBQ13191 982 aa3.69□□□□□ -1.82
LRRTM3-202ENST00000472278 INTS6LQ5JSJ4 861 aaKnown RBP3.69□□□□□ -1.82
LRRTM3-202ENST00000472278 ZMYM1Q5SVZ6 1142 aa3.69□□□□□ -1.82
LRRTM3-202ENST00000472278 TMCO4Q5TGY1 634 aa3.69□□□□□ -1.82
LRRTM3-202ENST00000472278 CCER1Q8TC90 406 aaPredicted RBP3.69□□□□□ -1.82
LRRTM3-202ENST00000472278 ACDQ96AP0 544 aa3.69□□□□□ -1.82
LRRTM3-202ENST00000472278 ZNF594Q96JF6 807 aaPredicted RBP3.69□□□□□ -1.82
LRRTM3-202ENST00000472278 M0R2N6 131 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms