RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 NSD3Q9BZ95 1437 aa14.95□□□□□ -0.02
SPC25-203ENST00000472216 IQCA1LA6NCM1 817 aa14.95□□□□□ -0.02
SPC25-203ENST00000472216 PPLO60437 1756 aa14.95□□□□□ -0.02
SPC25-203ENST00000472216 WASLO00401 505 aaPredicted RBP14.94□□□□□ -0.02
SPC25-203ENST00000472216 AOC2O75106 756 aa14.94□□□□□ -0.02
SPC25-203ENST00000472216 PLA2G5P39877 138 aa14.94□□□□□ -0.02
SPC25-203ENST00000472216 BRPF1P55201 1214 aaPredicted RBP14.94□□□□□ -0.02
SPC25-203ENST00000472216 AMIGO3Q86WK7 504 aa14.94□□□□□ -0.02
SPC25-203ENST00000472216 ANKRD36BQ8N2N9 1353 aa14.94□□□□□ -0.02
SPC25-203ENST00000472216 VPS8Q8N3P4 1428 aa14.93□□□□□ -0.02
SPC25-203ENST00000472216 SSFA2P28290 1259 aa14.93□□□□□ -0.02
SPC25-203ENST00000472216 DDX54Q8TDD1 881 aaKnown RBP14.93□□□□□ -0.02
SPC25-203ENST00000472216 HPS5Q9UPZ3 1129 aa14.93□□□□□ -0.02
SPC25-203ENST00000472216 KANK4Q5T7N3 995 aaPredicted RBP14.92□□□□□ -0.02
SPC25-203ENST00000472216 SNX27Q96L92 541 aa14.92□□□□□ -0.02
SPC25-203ENST00000472216 CLEC11AQ9Y240 323 aa14.92□□□□□ -0.02
SPC25-203ENST00000472216 POLR3AO14802 1390 aaPredicted RBP14.91□□□□□ -0.02
SPC25-203ENST00000472216 CNTROBQ8N137 903 aa14.91□□□□□ -0.02
SPC25-203ENST00000472216 FAM122AQ96E09 287 aa14.91□□□□□ -0.02
SPC25-203ENST00000472216 ACEP12821 1306 aa14.9□□□□□ -0.02
SPC25-203ENST00000472216 NSD2O96028 1365 aa14.89□□□□□ -0.03
SPC25-203ENST00000472216 SLC4A2P04920 1241 aa14.89□□□□□ -0.03
SPC25-203ENST00000472216 CTU1Q7Z7A3 348 aaKnown RBP14.89□□□□□ -0.03
SPC25-203ENST00000472216 NLGN1Q8N2Q7 840 aa14.89□□□□□ -0.03
SPC25-203ENST00000472216 TAF1DQ9H5J8 278 aaPredicted RBP14.89□□□□□ -0.03
SPC25-203ENST00000472216 C5P01031 1676 aa14.89□□□□□ -0.03
SPC25-203ENST00000472216 EAPPQ56P03 285 aaPredicted RBP14.88□□□□□ -0.03
SPC25-203ENST00000472216 NUDT16Q96DE0 195 aaKnown RBP14.88□□□□□ -0.03
SPC25-203ENST00000472216 DDNO94850 711 aaPredicted RBP14.87□□□□□ -0.03
SPC25-203ENST00000472216 DDX21Q9NR30 783 aaKnown RBP eCLIP14.87□□□□□ -0.03
SPC25-203ENST00000472216 NLRP6P59044 892 aa14.86□□□□□ -0.03
SPC25-203ENST00000472216 ERFEQ4G0M1 354 aa14.86□□□□□ -0.03
SPC25-203ENST00000472216 PARP3Q9Y6F1 533 aa14.86□□□□□ -0.03
SPC25-203ENST00000472216 VCANP13611 3396 aa14.86□□□□□ -0.03
SPC25-203ENST00000472216 TIAM2Q8IVF5 1701 aa14.86□□□□□ -0.03
SPC25-203ENST00000472216 TMF1P82094 1093 aa14.85□□□□□ -0.03
SPC25-203ENST00000472216 MAP1SQ66K74 1059 aaPredicted RBP14.85□□□□□ -0.03
SPC25-203ENST00000472216 CIAPIN1Q6FI81 312 aa14.85□□□□□ -0.03
SPC25-203ENST00000472216 NLRP2Q9NX02 1062 aa14.85□□□□□ -0.03
SPC25-203ENST00000472216 PKN2Q16513 984 aaKnown RBP14.84□□□□□ -0.03
SPC25-203ENST00000472216 ARHGEF25Q86VW2 580 aa14.84□□□□□ -0.03
SPC25-203ENST00000472216 CPSF1Q10570 1443 aaKnown RBP14.83□□□□□ -0.03
SPC25-203ENST00000472216 CHRNA5P30532 468 aa14.82□□□□□ -0.04
SPC25-203ENST00000472216 TLL2Q9Y6L7 1015 aa14.82□□□□□ -0.04
SPC25-203ENST00000472216 C4BP0C0L5 1744 aa14.81□□□□□ -0.04
SPC25-203ENST00000472216 NBPF1Q3BBV0 1214 aa14.81□□□□□ -0.04
SPC25-203ENST00000472216 OTUD5Q96G74 571 aa14.81□□□□□ -0.04
SPC25-203ENST00000472216 C14orf93Q9H972 538 aaKnown RBP14.81□□□□□ -0.04
SPC25-203ENST00000472216 PIK3C2GO75747 1445 aa14.81□□□□□ -0.04
SPC25-203ENST00000472216 AKAP4Q5JQC9 854 aa14.8□□□□□ -0.04
SPC25-203ENST00000472216 PNMA8AQ86V59 439 aaPredicted RBP14.8□□□□□ -0.04
SPC25-203ENST00000472216 RANBP2P49792 3224 aaKnown RBP14.79□□□□□ -0.04
SPC25-203ENST00000472216 UBR3Q6ZT12 1888 aa14.79□□□□□ -0.04
SPC25-203ENST00000472216 L3MBTL3Q96JM7 780 aaPredicted RBP14.79□□□□□ -0.04
SPC25-203ENST00000472216 TOGARAM1Q9Y4F4 1720 aa14.79□□□□□ -0.04
SPC25-203ENST00000472216 SLIT3O75094 1523 aa14.78□□□□□ -0.04
SPC25-203ENST00000472216 PLEKHG3A1L390 1219 aa14.78□□□□□ -0.04
SPC25-203ENST00000472216 SAGE1Q9NXZ1 904 aa14.78□□□□□ -0.04
SPC25-203ENST00000472216 TAF1LQ8IZX4 1826 aa14.78□□□□□ -0.04
SPC25-203ENST00000472216 PALLDQ8WX93 1383 aa14.77□□□□□ -0.04
SPC25-203ENST00000472216 NFKBIEO00221 500 aa14.77□□□□□ -0.05
SPC25-203ENST00000472216 RGL3Q3MIN7 710 aa14.77□□□□□ -0.05
SPC25-203ENST00000472216 CCDC61Q9Y6R9 512 aa14.77□□□□□ -0.05
SPC25-203ENST00000472216 CCDC88AQ3V6T2 1871 aa14.76□□□□□ -0.05
SPC25-203ENST00000472216 GNPATO15228 680 aa14.76□□□□□ -0.05
SPC25-203ENST00000472216 KCNH5Q8NCM2 988 aa14.76□□□□□ -0.05
SPC25-203ENST00000472216 RGPD5Q99666 1765 aa14.75□□□□□ -0.05
SPC25-203ENST00000472216 FAM50AQ14320 339 aaKnown RBP14.75□□□□□ -0.05
SPC25-203ENST00000472216 CST9Q5W186 159 aa14.75□□□□□ -0.05
SPC25-203ENST00000472216 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.75□□□□□ -0.05
SPC25-203ENST00000472216 HHIPL1Q96JK4 782 aa14.75□□□□□ -0.05
SPC25-203ENST00000472216 RAPGEFL1Q9UHV5 662 aa14.75□□□□□ -0.05
SPC25-203ENST00000472216 HACL1Q9UJ83 578 aa14.75□□□□□ -0.05
SPC25-203ENST00000472216 SCN4AP35499 1836 aa14.75□□□□□ -0.05
SPC25-203ENST00000472216 C4AP0C0L4 1744 aa14.75□□□□□ -0.05
SPC25-203ENST00000472216 EPHX2P34913 555 aa14.74□□□□□ -0.05
SPC25-203ENST00000472216 CFAP70Q5T0N1 1121 aa14.74□□□□□ -0.05
SPC25-203ENST00000472216 CHRDL2Q6WN34 429 aa14.74□□□□□ -0.05
SPC25-203ENST00000472216 DOT1LQ8TEK3 1739 aa14.74□□□□□ -0.05
SPC25-203ENST00000472216 BRCA2P51587 3418 aa14.73□□□□□ -0.05
SPC25-203ENST00000472216 SPTBN5Q9NRC6 3674 aaKnown RBP14.73□□□□□ -0.05
SPC25-203ENST00000472216 ZBTB22O15209 634 aa14.73□□□□□ -0.05
SPC25-203ENST00000472216 NOGQ13253 232 aa14.73□□□□□ -0.05
SPC25-203ENST00000472216 CEP290O15078 2479 aa14.73□□□□□ -0.05
SPC25-203ENST00000472216 TRAPPC3LQ5T215 181 aa14.72□□□□□ -0.05
SPC25-203ENST00000472216 ANKRD13DQ6ZTN6 518 aa14.72□□□□□ -0.05
SPC25-203ENST00000472216 SAPCD2Q86UD0 394 aa14.72□□□□□ -0.05
SPC25-203ENST00000472216 CCDC24Q8N4L8 307 aa14.72□□□□□ -0.05
SPC25-203ENST00000472216 CABP2Q9NPB3 220 aa14.72□□□□□ -0.05
SPC25-203ENST00000472216 RBM27Q9P2N5 1060 aaKnown RBP14.72□□□□□ -0.05
SPC25-203ENST00000472216 TRAK1Q9UPV9 953 aa14.72□□□□□ -0.05
SPC25-203ENST00000472216 FOXD4L1Q9NU39 408 aa14.71□□□□□ -0.05
SPC25-203ENST00000472216 H0YGN5 161 aa14.7□□□□□ -0.06
SPC25-203ENST00000472216 SOX12O15370 315 aa14.7□□□□□ -0.06
SPC25-203ENST00000472216 FMR1Q06787 632 aaKnown RBP eCLIP14.7□□□□□ -0.06
SPC25-203ENST00000472216 TTLL6Q8N841 843 aa14.7□□□□□ -0.06
SPC25-203ENST00000472216 SMARCC1Q92922 1105 aaPredicted RBP14.7□□□□□ -0.06
SPC25-203ENST00000472216 ERBB4Q15303 1308 aa14.69□□□□□ -0.06
SPC25-203ENST00000472216 TRPA1O75762 1119 aa14.69□□□□□ -0.06
SPC25-203ENST00000472216 STXBP5LQ9Y2K9 1186 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms