RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 GNAT3A8MTJ3 354 aa11.15□□□□□ -0.62
TSPAN1-205ENST00000472170 TEFQ10587 303 aa11.15□□□□□ -0.62
TSPAN1-205ENST00000472170 RALBP1Q15311 655 aa11.15□□□□□ -0.62
TSPAN1-205ENST00000472170 KLHL34Q8N239 644 aa11.15□□□□□ -0.62
TSPAN1-205ENST00000472170 RTF1Q92541 710 aaKnown RBP11.15□□□□□ -0.62
TSPAN1-205ENST00000472170 FCHSD2O94868 740 aa11.14□□□□□ -0.63
TSPAN1-205ENST00000472170 DDX10Q13206 875 aaKnown RBP11.14□□□□□ -0.63
TSPAN1-205ENST00000472170 TRAPPC3LQ5T215 181 aa11.14□□□□□ -0.63
TSPAN1-205ENST00000472170 NPM2Q86SE8 214 aaKnown RBP11.14□□□□□ -0.63
TSPAN1-205ENST00000472170 TTC5Q8N0Z6 440 aa11.14□□□□□ -0.63
TSPAN1-205ENST00000472170 PDGFDQ9GZP0 370 aaPredicted RBP11.14□□□□□ -0.63
TSPAN1-205ENST00000472170 RTCBQ9Y3I0 505 aaKnown RBP11.14□□□□□ -0.63
TSPAN1-205ENST00000472170 PNPLA7Q6ZV29 1317 aa11.13□□□□□ -0.63
TSPAN1-205ENST00000472170 GNPATO15228 680 aa11.13□□□□□ -0.63
TSPAN1-205ENST00000472170 RNMTO43148 476 aaKnown RBP11.13□□□□□ -0.63
TSPAN1-205ENST00000472170 PTCD1O75127 700 aaKnown RBP11.13□□□□□ -0.63
TSPAN1-205ENST00000472170 PHF14O94880 888 aa11.13□□□□□ -0.63
TSPAN1-205ENST00000472170 SSFA2P28290 1259 aa11.13□□□□□ -0.63
TSPAN1-205ENST00000472170 MTHFSDQ2M296 383 aaKnown RBP11.13□□□□□ -0.63
TSPAN1-205ENST00000472170 RC3H1Q5TC82 1133 aaKnown RBP11.13□□□□□ -0.63
TSPAN1-205ENST00000472170 COL23A1Q86Y22 540 aaPredicted RBP11.13□□□□□ -0.63
TSPAN1-205ENST00000472170 SLC52A2Q9HAB3 445 aa11.13□□□□□ -0.63
TSPAN1-205ENST00000472170 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.12□□□□□ -0.63
TSPAN1-205ENST00000472170 PRKAR2BP31323 418 aa11.12□□□□□ -0.63
TSPAN1-205ENST00000472170 RFC4P35249 363 aa11.12□□□□□ -0.63
TSPAN1-205ENST00000472170 PTGER2P43116 358 aa11.12□□□□□ -0.63
TSPAN1-205ENST00000472170 SYT17Q9BSW7 474 aa11.12□□□□□ -0.63
TSPAN1-205ENST00000472170 ADRA2BP18089 450 aa11.11□□□□□ -0.63
TSPAN1-205ENST00000472170 TEX13AQ9BXU3 409 aaPredicted RBP11.11□□□□□ -0.63
TSPAN1-205ENST00000472170 FHDC1Q9C0D6 1143 aaPredicted RBP11.11□□□□□ -0.63
TSPAN1-205ENST00000472170 LGR6Q9HBX8 967 aa11.11□□□□□ -0.63
TSPAN1-205ENST00000472170 CASZ1Q86V15 1759 aa11.11□□□□□ -0.63
TSPAN1-205ENST00000472170 QSER1Q2KHR3 1735 aa11.1□□□□□ -0.63
TSPAN1-205ENST00000472170 STARD3NLO95772 234 aa11.1□□□□□ -0.63
TSPAN1-205ENST00000472170 NLGN1Q8N2Q7 840 aa11.1□□□□□ -0.63
TSPAN1-205ENST00000472170 C5P01031 1676 aa11.1□□□□□ -0.63
TSPAN1-205ENST00000472170 MAPK8IP3Q9UPT6 1336 aa11.09□□□□□ -0.63
TSPAN1-205ENST00000472170 HTATSF1O43719 755 aaKnown RBP11.09□□□□□ -0.63
TSPAN1-205ENST00000472170 RPS6KA4O75676 772 aa11.09□□□□□ -0.63
TSPAN1-205ENST00000472170 GPR162Q16538 588 aa11.09□□□□□ -0.63
TSPAN1-205ENST00000472170 LINC00116Q8NCU8 138 aa11.09□□□□□ -0.63
TSPAN1-205ENST00000472170 TOGARAM1Q9Y4F4 1720 aa11.09□□□□□ -0.63
TSPAN1-205ENST00000472170 PAPPAQ13219 1627 aa11.09□□□□□ -0.63
TSPAN1-205ENST00000472170 MAP3K5Q99683 1374 aa11.08□□□□□ -0.64
TSPAN1-205ENST00000472170 TAF1LQ8IZX4 1826 aa11.08□□□□□ -0.64
TSPAN1-205ENST00000472170 ZPR1O75312 459 aa11.08□□□□□ -0.64
TSPAN1-205ENST00000472170 ITPK1Q13572 414 aa11.08□□□□□ -0.64
TSPAN1-205ENST00000472170 MSL1Q68DK7 614 aa11.08□□□□□ -0.64
TSPAN1-205ENST00000472170 VSIG10Q8N0Z9 540 aa11.08□□□□□ -0.64
TSPAN1-205ENST00000472170 SGIP1Q9BQI5 828 aa11.08□□□□□ -0.64
TSPAN1-205ENST00000472170 CNTNAP4Q9C0A0 1308 aa11.08□□□□□ -0.64
TSPAN1-205ENST00000472170 C4BP0C0L5 1744 aa11.07□□□□□ -0.64
TSPAN1-205ENST00000472170 BTBD11A6QL63 1104 aa11.07□□□□□ -0.64
TSPAN1-205ENST00000472170 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
TSPAN1-205ENST00000472170 CD2APQ9Y5K6 639 aa11.07□□□□□ -0.64
TSPAN1-205ENST00000472170 SCN11AQ9UI33 1791 aa11.07□□□□□ -0.64
TSPAN1-205ENST00000472170 KDM6AO15550 1401 aaPredicted RBP11.07□□□□□ -0.64
TSPAN1-205ENST00000472170 A0A087WZG4 1122 aa11.06□□□□□ -0.64
TSPAN1-205ENST00000472170 CRKLP46109 303 aaKnown RBP11.06□□□□□ -0.64
TSPAN1-205ENST00000472170 SLC39A6Q13433 755 aa11.06□□□□□ -0.64
TSPAN1-205ENST00000472170 WDR43Q15061 677 aaKnown RBP eCLIP11.06□□□□□ -0.64
TSPAN1-205ENST00000472170 PHACTR3Q96KR7 559 aa11.06□□□□□ -0.64
TSPAN1-205ENST00000472170 FMNL2Q96PY5 1086 aa11.06□□□□□ -0.64
TSPAN1-205ENST00000472170 GRIN3BO60391 1043 aa11.05□□□□□ -0.64
TSPAN1-205ENST00000472170 ZNF790Q6PG37 636 aa11.05□□□□□ -0.64
TSPAN1-205ENST00000472170 IL17REQ8NFR9 667 aa11.05□□□□□ -0.64
TSPAN1-205ENST00000472170 PNISRQ8TF01 805 aaKnown RBP11.05□□□□□ -0.64
TSPAN1-205ENST00000472170 ARHGEF1Q92888 912 aaKnown RBP11.05□□□□□ -0.64
TSPAN1-205ENST00000472170 CCDC87Q9NVE4 849 aa11.05□□□□□ -0.64
TSPAN1-205ENST00000472170 PARP3Q9Y6F1 533 aa11.05□□□□□ -0.64
TSPAN1-205ENST00000472170 MYBBP1AQ9BQG0 1328 aaKnown RBP11.05□□□□□ -0.64
TSPAN1-205ENST00000472170 TAF7Q15545 349 aaPredicted RBP11.04□□□□□ -0.64
TSPAN1-205ENST00000472170 DNAJC10Q8IXB1 793 aa11.04□□□□□ -0.64
TSPAN1-205ENST00000472170 COL3A1P02461 1466 aaPredicted RBP11.04□□□□□ -0.64
TSPAN1-205ENST00000472170 ZNF831Q5JPB2 1677 aa11.04□□□□□ -0.64
TSPAN1-205ENST00000472170 UTRNP46939 3433 aa11.03□□□□□ -0.64
TSPAN1-205ENST00000472170 LMOD3Q0VAK6 560 aa11.03□□□□□ -0.64
TSPAN1-205ENST00000472170 SLC4A9Q96Q91 983 aa11.03□□□□□ -0.64
TSPAN1-205ENST00000472170 VIRMAQ69YN4 1812 aaKnown RBP11.02□□□□□ -0.64
TSPAN1-205ENST00000472170 TUBGCP6Q96RT7 1819 aa11.02□□□□□ -0.64
TSPAN1-205ENST00000472170 UBR3Q6ZT12 1888 aa11.02□□□□□ -0.64
TSPAN1-205ENST00000472170 MMP10P09238 476 aa11.02□□□□□ -0.65
TSPAN1-205ENST00000472170 CYP19A1P11511 503 aaPredicted RBP11.02□□□□□ -0.65
TSPAN1-205ENST00000472170 CANXP27824 592 aaKnown RBP11.02□□□□□ -0.65
TSPAN1-205ENST00000472170 SNRPA1P09661 255 aaKnown RBP11.01□□□□□ -0.65
TSPAN1-205ENST00000472170 TGFB2P61812 414 aa11.01□□□□□ -0.65
TSPAN1-205ENST00000472170 NFE2L2Q16236 605 aa11.01□□□□□ -0.65
TSPAN1-205ENST00000472170 MCM10Q7L590 875 aa11.01□□□□□ -0.65
TSPAN1-205ENST00000472170 ZNF784Q8NCA9 323 aaPredicted RBP11.01□□□□□ -0.65
TSPAN1-205ENST00000472170 ZNF330Q9Y3S2 320 aaPredicted RBP11.01□□□□□ -0.65
TSPAN1-205ENST00000472170 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
TSPAN1-205ENST00000472170 NPHP1O15259 732 aa11□□□□□ -0.65
TSPAN1-205ENST00000472170 RIPK4P57078 832 aa11□□□□□ -0.65
TSPAN1-205ENST00000472170 INTS5Q6P9B9 1019 aaKnown RBP11□□□□□ -0.65
TSPAN1-205ENST00000472170 SMIM5Q71RC9 77 aa11□□□□□ -0.65
TSPAN1-205ENST00000472170 ZNF496Q96IT1 587 aaPredicted RBP11□□□□□ -0.65
TSPAN1-205ENST00000472170 HEG1Q9ULI3 1381 aa11□□□□□ -0.65
TSPAN1-205ENST00000472170 SENP3-EIF4A1A0A087X0R7 540 aa10.99□□□□□ -0.65
TSPAN1-205ENST00000472170 GYS1P13807 737 aa10.99□□□□□ -0.65
TSPAN1-205ENST00000472170 NARFQ9UHQ1 456 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms