RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 PHF14O94880 888 aa30.67■■■□□ 2.5
C9orf3-213ENST00000471978 ITPK1Q13572 414 aa30.67■■■□□ 2.5
C9orf3-213ENST00000471978 NLGN2Q8NFZ4 835 aa30.67■■■□□ 2.5
C9orf3-213ENST00000471978 PER1O15534 1290 aaPredicted RBP30.66■■■□□ 2.5
C9orf3-213ENST00000471978 SMIM5Q71RC9 77 aa30.66■■■□□ 2.5
C9orf3-213ENST00000471978 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.65■■■□□ 2.5
C9orf3-213ENST00000471978 UBR3Q6ZT12 1888 aa30.65■■■□□ 2.5
C9orf3-213ENST00000471978 MTHFSP49914 203 aa30.64■■■□□ 2.5
C9orf3-213ENST00000471978 C1orf141Q5JVX7 400 aa30.64■■■□□ 2.5
C9orf3-213ENST00000471978 KDRP35968 1356 aa30.64■■■□□ 2.5
C9orf3-213ENST00000471978 KDM6AO15550 1401 aaPredicted RBP30.64■■■□□ 2.49
C9orf3-213ENST00000471978 SSFA2P28290 1259 aa30.63■■■□□ 2.49
C9orf3-213ENST00000471978 CC2D1BQ5T0F9 858 aaKnown RBP30.63■■■□□ 2.49
C9orf3-213ENST00000471978 PELP1Q8IZL8 1130 aaKnown RBP30.63■■■□□ 2.49
C9orf3-213ENST00000471978 CABP4P57796 275 aa30.62■■■□□ 2.49
C9orf3-213ENST00000471978 GNPATO15228 680 aa30.61■■■□□ 2.49
C9orf3-213ENST00000471978 RBM42Q9BTD8 480 aaKnown RBP30.6■■■□□ 2.49
C9orf3-213ENST00000471978 SLC4A9Q96Q91 983 aa30.58■■■□□ 2.49
C9orf3-213ENST00000471978 CHD4Q14839 1912 aa30.57■■■□□ 2.48
C9orf3-213ENST00000471978 CD2APQ9Y5K6 639 aa30.56■■■□□ 2.48
C9orf3-213ENST00000471978 ZNF784Q8NCA9 323 aaPredicted RBP30.55■■■□□ 2.48
C9orf3-213ENST00000471978 NFATC2IPQ8NCF5 419 aa30.54■■■□□ 2.48
C9orf3-213ENST00000471978 ZNF831Q5JPB2 1677 aa30.53■■■□□ 2.48
C9orf3-213ENST00000471978 HMOX1P09601 288 aa30.53■■■□□ 2.48
C9orf3-213ENST00000471978 CNGB1Q14028 1251 aaPredicted RBP30.53■■■□□ 2.48
C9orf3-213ENST00000471978 DIAPH1O60610 1272 aaKnown RBP30.52■■■□□ 2.48
C9orf3-213ENST00000471978 RTCBQ9Y3I0 505 aaKnown RBP30.52■■■□□ 2.48
C9orf3-213ENST00000471978 AKAP4Q5JQC9 854 aa30.51■■■□□ 2.47
C9orf3-213ENST00000471978 NPC1L1Q9UHC9 1359 aa30.51■■■□□ 2.47
C9orf3-213ENST00000471978 PTCD1O75127 700 aaKnown RBP30.5■■■□□ 2.47
C9orf3-213ENST00000471978 YBX3P16989 372 aaKnown RBP eCLIP30.5■■■□□ 2.473e-7■■□□□ 11.8
C9orf3-213ENST00000471978 TRAPPC3LQ5T215 181 aa30.5■■■□□ 2.47
C9orf3-213ENST00000471978 RC3H1Q5TC82 1133 aaKnown RBP30.5■■■□□ 2.47
C9orf3-213ENST00000471978 GRIN3BO60391 1043 aa30.48■■■□□ 2.47
C9orf3-213ENST00000471978 CNTNAP4Q9C0A0 1308 aa30.47■■■□□ 2.47
C9orf3-213ENST00000471978 COL5A3P25940 1745 aaPredicted RBP30.47■■■□□ 2.47
C9orf3-213ENST00000471978 SCN11AQ9UI33 1791 aa30.46■■■□□ 2.47
C9orf3-213ENST00000471978 LGR6Q9HBX8 967 aa30.45■■■□□ 2.47
C9orf3-213ENST00000471978 RPS6KA4O75676 772 aa30.44■■■□□ 2.46
C9orf3-213ENST00000471978 ADRA2BP18089 450 aa30.44■■■□□ 2.46
C9orf3-213ENST00000471978 ARHGEF1Q92888 912 aaKnown RBP30.44■■■□□ 2.46
C9orf3-213ENST00000471978 SLC52A2Q9HAB3 445 aa30.44■■■□□ 2.46
C9orf3-213ENST00000471978 MTHFSDQ2M296 383 aaKnown RBP30.43■■■□□ 2.46
C9orf3-213ENST00000471978 MMP10P09238 476 aa30.42■■■□□ 2.46
C9orf3-213ENST00000471978 RNMTO43148 476 aaKnown RBP30.41■■■□□ 2.46
C9orf3-213ENST00000471978 COL3A1P02461 1466 aaPredicted RBP30.41■■■□□ 2.46
C9orf3-213ENST00000471978 RFC4P35249 363 aa30.4■■■□□ 2.46
C9orf3-213ENST00000471978 CRKLP46109 303 aaKnown RBP30.4■■■□□ 2.46
C9orf3-213ENST00000471978 NLGN1Q8N2Q7 840 aa30.4■■■□□ 2.46
C9orf3-213ENST00000471978 U2SURPO15042 1029 aaKnown RBP30.39■■■□□ 2.46
C9orf3-213ENST00000471978 MYH14Q7Z406 1995 aaKnown RBP30.39■■■□□ 2.46
C9orf3-213ENST00000471978 MRC1P22897 1456 aa30.37■■■□□ 2.45
C9orf3-213ENST00000471978 GYS1P13807 737 aa30.36■■■□□ 2.45
C9orf3-213ENST00000471978 TJP1Q07157 1748 aa30.36■■■□□ 2.45
C9orf3-213ENST00000471978 WWC3Q9ULE0 1092 aa30.35■■■□□ 2.45
C9orf3-213ENST00000471978 CICQ96RK0 1608 aaPredicted RBP30.34■■■□□ 2.45
C9orf3-213ENST00000471978 SLC39A6Q13433 755 aa30.34■■■□□ 2.45
C9orf3-213ENST00000471978 VIRMAQ69YN4 1812 aaKnown RBP30.32■■■□□ 2.44
C9orf3-213ENST00000471978 INTS5Q6P9B9 1019 aaKnown RBP30.32■■■□□ 2.44
C9orf3-213ENST00000471978 DNAJC10Q8IXB1 793 aa30.32■■■□□ 2.44
C9orf3-213ENST00000471978 C4AP0C0L4 1744 aa30.32■■■□□ 2.44
C9orf3-213ENST00000471978 ADAMTS7Q9UKP4 1686 aa30.32■■■□□ 2.44
C9orf3-213ENST00000471978 CFAP53Q96M91 514 aa30.31■■■□□ 2.44
C9orf3-213ENST00000471978 PARP3Q9Y6F1 533 aa30.3■■■□□ 2.44
C9orf3-213ENST00000471978 CCDC87Q9NVE4 849 aa30.29■■■□□ 2.44
C9orf3-213ENST00000471978 SRP68Q9UHB9 627 aaKnown RBP30.29■■■□□ 2.44
C9orf3-213ENST00000471978 GAS2L2Q8NHY3 880 aa30.28■■■□□ 2.44
C9orf3-213ENST00000471978 KCPQ6ZWJ8 1503 aa30.27■■■□□ 2.44
C9orf3-213ENST00000471978 USP42Q9H9J4 1324 aaKnown RBP30.27■■■□□ 2.44
C9orf3-213ENST00000471978 C10orf71Q711Q0 1435 aa30.27■■■□□ 2.44
C9orf3-213ENST00000471978 PXDNLA1KZ92 1463 aa30.26■■■□□ 2.44
C9orf3-213ENST00000471978 GNAT3A8MTJ3 354 aa30.26■■■□□ 2.43
C9orf3-213ENST00000471978 CYP19A1P11511 503 aaPredicted RBP30.26■■■□□ 2.43
C9orf3-213ENST00000471978 TGFB2P61812 414 aa30.26■■■□□ 2.43
C9orf3-213ENST00000471978 KIF13BQ9NQT8 1826 aa30.26■■■□□ 2.43
C9orf3-213ENST00000471978 FKBP8Q14318 412 aa30.25■■■□□ 2.43
C9orf3-213ENST00000471978 VSIG10Q8N0Z9 540 aa30.24■■■□□ 2.43
C9orf3-213ENST00000471978 A0A0G2JLW4 131 aa30.23■■■□□ 2.43
C9orf3-213ENST00000471978 PPP2R1AP30153 589 aa30.23■■■□□ 2.43
C9orf3-213ENST00000471978 TEFQ10587 303 aa30.23■■■□□ 2.43
C9orf3-213ENST00000471978 TTC5Q8N0Z6 440 aa30.23■■■□□ 2.43
C9orf3-213ENST00000471978 IL17REQ8NFR9 667 aa30.23■■■□□ 2.43
C9orf3-213ENST00000471978 NUDCQ9Y266 331 aa30.23■■■□□ 2.43
C9orf3-213ENST00000471978 SOS1Q07889 1333 aaPredicted RBP30.22■■■□□ 2.43
C9orf3-213ENST00000471978 PRKAR2BP31323 418 aa30.22■■■□□ 2.43
C9orf3-213ENST00000471978 ZPR1O75312 459 aa30.21■■■□□ 2.43
C9orf3-213ENST00000471978 GIGYF1O75420 1035 aaPredicted RBP30.21■■■□□ 2.43
C9orf3-213ENST00000471978 C1QTNF8P60827 252 aa30.21■■■□□ 2.43
C9orf3-213ENST00000471978 PHACTR3Q96KR7 559 aa30.21■■■□□ 2.43
C9orf3-213ENST00000471978 RSPH6AQ9H0K4 717 aa30.21■■■□□ 2.43
C9orf3-213ENST00000471978 KIAA1551Q9HCM1 1747 aa30.21■■■□□ 2.43
C9orf3-213ENST00000471978 N4BP2Q86UW6 1770 aaPredicted RBP30.2■■■□□ 2.43
C9orf3-213ENST00000471978 UBR2Q8IWV8 1755 aa30.19■■■□□ 2.42
C9orf3-213ENST00000471978 DPEP1P16444 411 aa30.19■■■□□ 2.42
C9orf3-213ENST00000471978 DDR1Q08345 913 aa30.19■■■□□ 2.42
C9orf3-213ENST00000471978 USPL1Q5W0Q7 1092 aa30.19■■■□□ 2.42
C9orf3-213ENST00000471978 ZBTB1Q9Y2K1 713 aa30.19■■■□□ 2.42
C9orf3-213ENST00000471978 ATP10DQ9P241 1426 aa30.19■■■□□ 2.42
C9orf3-213ENST00000471978 BCS1LQ9Y276 419 aa30.18■■■□□ 2.42
C9orf3-213ENST00000471978 U2AF1L5P0DN76 240 aaPredicted RBP30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms