RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 USP17L24Q0WX57 530 aa7.56□□□□□ -1.2
MDM2-216ENST00000471946 CLN3Q13286 438 aa7.56□□□□□ -1.2
MDM2-216ENST00000471946 ANKMY2Q8IV38 441 aa7.56□□□□□ -1.2
MDM2-216ENST00000471946 NLRP3Q96P20 1036 aa7.56□□□□□ -1.2
MDM2-216ENST00000471946 ESYT1Q9BSJ8 1104 aa7.56□□□□□ -1.2
MDM2-216ENST00000471946 ESCO1Q5FWF5 840 aa7.55□□□□□ -1.2
MDM2-216ENST00000471946 SIX5Q8N196 739 aa7.55□□□□□ -1.2
MDM2-216ENST00000471946 FAM200AQ8TCP9 573 aa7.55□□□□□ -1.2
MDM2-216ENST00000471946 ARXQ96QS3 562 aa7.55□□□□□ -1.2
MDM2-216ENST00000471946 ZNF358Q9NW07 568 aa7.55□□□□□ -1.2
MDM2-216ENST00000471946 NOVA2Q9UNW9 492 aaKnown RBP7.55□□□□□ -1.2
MDM2-216ENST00000471946 HRH3Q9Y5N1 445 aa7.55□□□□□ -1.2
MDM2-216ENST00000471946 FIGNL2A6NMB9 653 aa7.54□□□□□ -1.2
MDM2-216ENST00000471946 ELOAQ14241 798 aaKnown RBP7.54□□□□□ -1.2
MDM2-216ENST00000471946 SLC4A9Q96Q91 983 aa7.54□□□□□ -1.2
MDM2-216ENST00000471946 POLMQ9NP87 494 aaPredicted RBP7.54□□□□□ -1.2
MDM2-216ENST00000471946 GMPR2Q9P2T1 348 aaKnown RBP7.54□□□□□ -1.2
MDM2-216ENST00000471946 RBM19Q9Y4C8 960 aaKnown RBP7.54□□□□□ -1.2
MDM2-216ENST00000471946 LGR5O75473 907 aa7.53□□□□□ -1.2
MDM2-216ENST00000471946 RNF144AP50876 292 aaPredicted RBP7.53□□□□□ -1.2
MDM2-216ENST00000471946 SEC13P55735 322 aa7.53□□□□□ -1.2
MDM2-216ENST00000471946 TNS4Q8IZW8 715 aa7.53□□□□□ -1.2
MDM2-216ENST00000471946 ZMIZ1Q9ULJ6 1067 aa7.53□□□□□ -1.2
MDM2-216ENST00000471946 SOS2Q07890 1332 aaPredicted RBP7.52□□□□□ -1.2
MDM2-216ENST00000471946 TTLL8A6PVC2 850 aa7.52□□□□□ -1.21
MDM2-216ENST00000471946 WASLO00401 505 aaPredicted RBP7.52□□□□□ -1.21
MDM2-216ENST00000471946 BACH1O14867 736 aa7.52□□□□□ -1.21
MDM2-216ENST00000471946 SMTNP53814 917 aa7.52□□□□□ -1.21
MDM2-216ENST00000471946 FOXD4L5Q5VV16 416 aaPredicted RBP7.52□□□□□ -1.21
MDM2-216ENST00000471946 HINFPQ9BQA5 517 aa7.52□□□□□ -1.21
MDM2-216ENST00000471946 GRIP2Q9C0E4 1043 aa7.52□□□□□ -1.21
MDM2-216ENST00000471946 CARNS1A5YM72 827 aa7.51□□□□□ -1.21
MDM2-216ENST00000471946 SOBPA7XYQ1 873 aa7.51□□□□□ -1.21
MDM2-216ENST00000471946 SLC27A3Q5K4L6 730 aa7.51□□□□□ -1.21
MDM2-216ENST00000471946 PRICKLE2Q7Z3G6 844 aa7.51□□□□□ -1.21
MDM2-216ENST00000471946 TSEN2Q8NCE0 465 aaKnown RBP7.51□□□□□ -1.21
MDM2-216ENST00000471946 STK32AQ8WU08 396 aa7.51□□□□□ -1.21
MDM2-216ENST00000471946 FHDC1Q9C0D6 1143 aaPredicted RBP7.51□□□□□ -1.21
MDM2-216ENST00000471946 A6NJY4 79 aa7.5□□□□□ -1.21
MDM2-216ENST00000471946 ZSCAN10Q96SZ4 725 aaPredicted RBP7.5□□□□□ -1.21
MDM2-216ENST00000471946 SENP2Q9HC62 589 aa7.5□□□□□ -1.21
MDM2-216ENST00000471946 M0R2N6 131 aa7.49□□□□□ -1.21
MDM2-216ENST00000471946 CDK2AP1O14519 115 aa7.49□□□□□ -1.21
MDM2-216ENST00000471946 SNRPBP14678 240 aaKnown RBP7.49□□□□□ -1.21
MDM2-216ENST00000471946 GPC1P35052 558 aa7.49□□□□□ -1.21
MDM2-216ENST00000471946 FAM69CQ0P6D2 419 aa7.49□□□□□ -1.21
MDM2-216ENST00000471946 POU4F2Q12837 409 aa7.49□□□□□ -1.21
MDM2-216ENST00000471946 MTFR1Q15390 333 aa7.49□□□□□ -1.21
MDM2-216ENST00000471946 TLR1Q15399 786 aa7.49□□□□□ -1.21
MDM2-216ENST00000471946 TMEM164Q5U3C3 297 aa7.49□□□□□ -1.21
MDM2-216ENST00000471946 RNF217Q8TC41 542 aa7.49□□□□□ -1.21
MDM2-216ENST00000471946 DNMT3LQ9UJW3 386 aa7.49□□□□□ -1.21
MDM2-216ENST00000471946 C11orf95C9JLR9 678 aaPredicted RBP7.48□□□□□ -1.21
MDM2-216ENST00000471946 CSB-PGBD3P0DP91 1061 aa7.48□□□□□ -1.21
MDM2-216ENST00000471946 EPHA4P54764 986 aa7.48□□□□□ -1.21
MDM2-216ENST00000471946 TBCELQ5QJ74 424 aa7.48□□□□□ -1.21
MDM2-216ENST00000471946 TMEM214Q6NUQ4 689 aaKnown RBP7.48□□□□□ -1.21
MDM2-216ENST00000471946 LYSMD3Q7Z3D4 306 aa7.48□□□□□ -1.21
MDM2-216ENST00000471946 GAS2L2Q8NHY3 880 aa7.48□□□□□ -1.21
MDM2-216ENST00000471946 KIFC2Q96AC6 838 aa7.48□□□□□ -1.21
MDM2-216ENST00000471946 TRIM47Q96LD4 638 aa7.48□□□□□ -1.21
MDM2-216ENST00000471946 USP3Q9Y6I4 520 aa7.48□□□□□ -1.21
MDM2-216ENST00000471946 MAN1A2O60476 641 aa7.47□□□□□ -1.21
MDM2-216ENST00000471946 PPARGC1BQ86YN6 1023 aaKnown RBP7.47□□□□□ -1.21
MDM2-216ENST00000471946 SCHIP1Q9P0W5 487 aaPredicted RBP7.47□□□□□ -1.21
MDM2-216ENST00000471946 ATAD2Q6PL18 1390 aa7.46□□□□□ -1.21
MDM2-216ENST00000471946 TMEM88BA6NKF7 163 aa7.46□□□□□ -1.22
MDM2-216ENST00000471946 RHOQP17081 205 aa7.46□□□□□ -1.22
MDM2-216ENST00000471946 PHKA2P46019 1235 aa7.46□□□□□ -1.22
MDM2-216ENST00000471946 FOXK2Q01167 660 aa7.46□□□□□ -1.22
MDM2-216ENST00000471946 RETREG2Q8NC44 543 aa7.46□□□□□ -1.22
MDM2-216ENST00000471946 PRIMPOLQ96LW4 560 aa7.46□□□□□ -1.22
MDM2-216ENST00000471946 TSPAN10Q9H1Z9 355 aaPredicted RBP7.46□□□□□ -1.22
MDM2-216ENST00000471946 IQSEC3Q9UPP2 1182 aaPredicted RBP7.46□□□□□ -1.22
MDM2-216ENST00000471946 SPATA31C2B4DYI2 1134 aa7.45□□□□□ -1.22
MDM2-216ENST00000471946 GTF2E1P29083 439 aaPredicted RBP7.45□□□□□ -1.22
MDM2-216ENST00000471946 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.45□□□□□ -1.22
MDM2-216ENST00000471946 SLC9A9Q8IVB4 645 aa7.45□□□□□ -1.22
MDM2-216ENST00000471946 SCG3Q8WXD2 468 aaKnown RBP7.45□□□□□ -1.22
MDM2-216ENST00000471946 SLAIN2Q9P270 581 aa7.45□□□□□ -1.22
MDM2-216ENST00000471946 PARP3Q9Y6F1 533 aa7.45□□□□□ -1.22
MDM2-216ENST00000471946 C21orf2O43822 256 aa7.44□□□□□ -1.22
MDM2-216ENST00000471946 SWI5Q1ZZU3 235 aa7.44□□□□□ -1.22
MDM2-216ENST00000471946 C4orf17Q53FE4 359 aa7.44□□□□□ -1.22
MDM2-216ENST00000471946 NBPF10Q6P3W6 841 aaKnown RBP7.44□□□□□ -1.22
MDM2-216ENST00000471946 NBPF15Q8N660 670 aa7.44□□□□□ -1.22
MDM2-216ENST00000471946 RHBDD1Q8TEB9 315 aa7.44□□□□□ -1.22
MDM2-216ENST00000471946 CABP1Q9NZU7 370 aa7.44□□□□□ -1.22
MDM2-216ENST00000471946 PRMT3O60678 531 aa7.43□□□□□ -1.22
MDM2-216ENST00000471946 GNASQ5JWF2 1037 aa7.43□□□□□ -1.22
MDM2-216ENST00000471946 TAS1R3Q7RTX0 852 aa7.43□□□□□ -1.22
MDM2-216ENST00000471946 CHMP7Q8WUX9 453 aaPredicted RBP7.43□□□□□ -1.22
MDM2-216ENST00000471946 NIFKQ9BYG3 293 aaKnown RBP7.43□□□□□ -1.22
MDM2-216ENST00000471946 WEE1P30291 646 aa7.42□□□□□ -1.22
MDM2-216ENST00000471946 NOS2P35228 1153 aa7.42□□□□□ -1.22
MDM2-216ENST00000471946 PTSQ03393 145 aa7.42□□□□□ -1.22
MDM2-216ENST00000471946 ZNF295-AS1Q8N0V1 137 aa7.42□□□□□ -1.22
MDM2-216ENST00000471946 ZDHHC1Q8WTX9 485 aa7.42□□□□□ -1.22
MDM2-216ENST00000471946 CLP1Q92989 425 aaKnown RBP7.42□□□□□ -1.22
MDM2-216ENST00000471946 AIDAQ96BJ3 306 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms