RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 COL5A3P25940 1745 aaPredicted RBP15.63■□□□□ 0.09
COL4A3-205ENST00000471862 POLD1P28340 1107 aa15.62■□□□□ 0.09
COL4A3-205ENST00000471862 FLAD1Q8NFF5 587 aa15.62■□□□□ 0.09
COL4A3-205ENST00000471862 ADAMTS7Q9UKP4 1686 aa15.62■□□□□ 0.09
COL4A3-205ENST00000471862 DIAPH1O60610 1272 aaKnown RBP15.61■□□□□ 0.09
COL4A3-205ENST00000471862 C1orf141Q5JVX7 400 aa15.61■□□□□ 0.09
COL4A3-205ENST00000471862 AK7Q96M32 723 aa15.61■□□□□ 0.09
COL4A3-205ENST00000471862 SLC4A9Q96Q91 983 aa15.61■□□□□ 0.09
COL4A3-205ENST00000471862 CICQ96RK0 1608 aaPredicted RBP15.61■□□□□ 0.09
COL4A3-205ENST00000471862 MRC1P22897 1456 aa15.6■□□□□ 0.09
COL4A3-205ENST00000471862 HMOX1P09601 288 aa15.6■□□□□ 0.09
COL4A3-205ENST00000471862 ATP6V1AP38606 617 aa15.6■□□□□ 0.09
COL4A3-205ENST00000471862 MSH5O43196 834 aa15.59■□□□□ 0.09
COL4A3-205ENST00000471862 SSFA2P28290 1259 aa15.59■□□□□ 0.09
COL4A3-205ENST00000471862 AKAP4Q5JQC9 854 aa15.59■□□□□ 0.09
COL4A3-205ENST00000471862 MYH14Q7Z406 1995 aaKnown RBP15.58■□□□□ 0.09
COL4A3-205ENST00000471862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.58■□□□□ 0.08
COL4A3-205ENST00000471862 DCAF8L1A6NGE4 600 aa15.58■□□□□ 0.08
COL4A3-205ENST00000471862 CABP4P57796 275 aa15.58■□□□□ 0.08
COL4A3-205ENST00000471862 MSL1Q68DK7 614 aa15.58■□□□□ 0.08
COL4A3-205ENST00000471862 SMIM5Q71RC9 77 aa15.58■□□□□ 0.08
COL4A3-205ENST00000471862 UTRNP46939 3433 aa15.58■□□□□ 0.08
COL4A3-205ENST00000471862 TJP1Q07157 1748 aa15.57■□□□□ 0.08
COL4A3-205ENST00000471862 CNGB1Q14028 1251 aaPredicted RBP15.57■□□□□ 0.08
COL4A3-205ENST00000471862 PHF14O94880 888 aa15.56■□□□□ 0.08
COL4A3-205ENST00000471862 MTHFSDQ2M296 383 aaKnown RBP15.56■□□□□ 0.08
COL4A3-205ENST00000471862 NFATC2IPQ8NCF5 419 aa15.56■□□□□ 0.08
COL4A3-205ENST00000471862 CHD4Q14839 1912 aa15.56■□□□□ 0.08
COL4A3-205ENST00000471862 CNTNAP4Q9C0A0 1308 aa15.55■□□□□ 0.08
COL4A3-205ENST00000471862 GNPATO15228 680 aa15.55■□□□□ 0.08
COL4A3-205ENST00000471862 RNMTO43148 476 aaKnown RBP15.55■□□□□ 0.08
COL4A3-205ENST00000471862 YY1P25490 414 aa15.55■□□□□ 0.08
COL4A3-205ENST00000471862 RC3H1Q5TC82 1133 aaKnown RBP15.55■□□□□ 0.08
COL4A3-205ENST00000471862 RBM42Q9BTD8 480 aaKnown RBP15.55■□□□□ 0.08
COL4A3-205ENST00000471862 LGR6Q9HBX8 967 aa15.55■□□□□ 0.08
COL4A3-205ENST00000471862 NLGN2Q8NFZ4 835 aa15.54■□□□□ 0.08
COL4A3-205ENST00000471862 SLC52A2Q9HAB3 445 aa15.54■□□□□ 0.08
COL4A3-205ENST00000471862 C4AP0C0L4 1744 aa15.54■□□□□ 0.08
COL4A3-205ENST00000471862 KLHL34Q8N239 644 aa15.53■□□□□ 0.08
COL4A3-205ENST00000471862 UBR2Q8IWV8 1755 aa15.52■□□□□ 0.08
COL4A3-205ENST00000471862 U2SURPO15042 1029 aaKnown RBP15.52■□□□□ 0.08
COL4A3-205ENST00000471862 PTCD1O75127 700 aaKnown RBP15.52■□□□□ 0.08
COL4A3-205ENST00000471862 PPP2R1AP30153 589 aa15.52■□□□□ 0.08
COL4A3-205ENST00000471862 KCPQ6ZWJ8 1503 aa15.52■□□□□ 0.07
COL4A3-205ENST00000471862 SIPA1L3O60292 1781 aaPredicted RBP15.52■□□□□ 0.07
COL4A3-205ENST00000471862 RTCBQ9Y3I0 505 aaKnown RBP15.51■□□□□ 0.07
COL4A3-205ENST00000471862 RPS6KA4O75676 772 aa15.5■□□□□ 0.07
COL4A3-205ENST00000471862 ADRA2BP18089 450 aa15.5■□□□□ 0.07
COL4A3-205ENST00000471862 CFAP53Q96M91 514 aa15.5■□□□□ 0.07
COL4A3-205ENST00000471862 CD2APQ9Y5K6 639 aa15.5■□□□□ 0.07
COL4A3-205ENST00000471862 GOLGB1Q14789 3259 aaKnown RBP15.49■□□□□ 0.07
COL4A3-205ENST00000471862 GAS2L2Q8NHY3 880 aa15.49■□□□□ 0.07
COL4A3-205ENST00000471862 ARHGEF1Q92888 912 aaKnown RBP15.49■□□□□ 0.07
COL4A3-205ENST00000471862 RSPH6AQ9H0K4 717 aa15.49■□□□□ 0.07
COL4A3-205ENST00000471862 KIF13BQ9NQT8 1826 aa15.49■□□□□ 0.07
COL4A3-205ENST00000471862 CRKLP46109 303 aaKnown RBP15.48■□□□□ 0.07
COL4A3-205ENST00000471862 SLC39A6Q13433 755 aa15.48■□□□□ 0.07
COL4A3-205ENST00000471862 GPR162Q16538 588 aa15.48■□□□□ 0.07
COL4A3-205ENST00000471862 TRAPPC3LQ5T215 181 aa15.48■□□□□ 0.07
COL4A3-205ENST00000471862 IL17REQ8NFR9 667 aa15.47■□□□□ 0.07
COL4A3-205ENST00000471862 KIAA1551Q9HCM1 1747 aa15.47■□□□□ 0.07
COL4A3-205ENST00000471862 GNAT3A8MTJ3 354 aa15.46■□□□□ 0.07
COL4A3-205ENST00000471862 GYS1P13807 737 aa15.46■□□□□ 0.07
COL4A3-205ENST00000471862 PRKAR2BP31323 418 aa15.46■□□□□ 0.07
COL4A3-205ENST00000471862 INTS5Q6P9B9 1019 aaKnown RBP15.46■□□□□ 0.07
COL4A3-205ENST00000471862 DNAJC10Q8IXB1 793 aa15.46■□□□□ 0.07
COL4A3-205ENST00000471862 PHACTR3Q96KR7 559 aa15.46■□□□□ 0.07
COL4A3-205ENST00000471862 NUDCQ9Y266 331 aa15.46■□□□□ 0.07
COL4A3-205ENST00000471862 CEMIPQ8WUJ3 1361 aa15.46■□□□□ 0.07
COL4A3-205ENST00000471862 MMP10P09238 476 aa15.45■□□□□ 0.06
COL4A3-205ENST00000471862 YBX3P16989 372 aaKnown RBP eCLIP15.45■□□□□ 0.06
COL4A3-205ENST00000471862 NLGN1Q8N2Q7 840 aa15.45■□□□□ 0.06
COL4A3-205ENST00000471862 CYP19A1P11511 503 aaPredicted RBP15.44■□□□□ 0.06
COL4A3-205ENST00000471862 VSIG10Q8N0Z9 540 aa15.44■□□□□ 0.06
COL4A3-205ENST00000471862 U2AF1L5P0DN76 240 aaPredicted RBP15.43■□□□□ 0.06
COL4A3-205ENST00000471862 RFC4P35249 363 aa15.43■□□□□ 0.06
COL4A3-205ENST00000471862 U2AF1Q01081 240 aaKnown RBP eCLIP15.43■□□□□ 0.06
COL4A3-205ENST00000471862 PELP1Q8IZL8 1130 aaKnown RBP15.43■□□□□ 0.06
COL4A3-205ENST00000471862 CCDC87Q9NVE4 849 aa15.43■□□□□ 0.06
COL4A3-205ENST00000471862 C10orf71Q711Q0 1435 aa15.43■□□□□ 0.06
COL4A3-205ENST00000471862 SOS1Q07889 1333 aaPredicted RBP15.43■□□□□ 0.06
COL4A3-205ENST00000471862 USP42Q9H9J4 1324 aaKnown RBP15.43■□□□□ 0.06
COL4A3-205ENST00000471862 FCHSD2O94868 740 aa15.42■□□□□ 0.06
COL4A3-205ENST00000471862 TEFQ10587 303 aa15.42■□□□□ 0.06
COL4A3-205ENST00000471862 PXDNLA1KZ92 1463 aa15.41■□□□□ 0.06
COL4A3-205ENST00000471862 GRIN3BO60391 1043 aa15.41■□□□□ 0.06
COL4A3-205ENST00000471862 ZNF784Q8NCA9 323 aaPredicted RBP15.41■□□□□ 0.06
COL4A3-205ENST00000471862 SRP68Q9UHB9 627 aaKnown RBP15.41■□□□□ 0.06
COL4A3-205ENST00000471862 BRCA1P38398 1863 aaKnown RBP15.4■□□□□ 0.06
COL4A3-205ENST00000471862 HEG1Q9ULI3 1381 aa15.4■□□□□ 0.06
COL4A3-205ENST00000471862 N4BP2Q86UW6 1770 aaPredicted RBP15.4■□□□□ 0.06
COL4A3-205ENST00000471862 ZNF790Q6PG37 636 aa15.4■□□□□ 0.06
COL4A3-205ENST00000471862 ZNF496Q96IT1 587 aaPredicted RBP15.4■□□□□ 0.06
COL4A3-205ENST00000471862 ZBTB1Q9Y2K1 713 aa15.4■□□□□ 0.06
COL4A3-205ENST00000471862 DLG5Q8TDM6 1919 aa15.4■□□□□ 0.06
COL4A3-205ENST00000471862 FKBP8Q14318 412 aa15.39■□□□□ 0.05
COL4A3-205ENST00000471862 TTC5Q8N0Z6 440 aa15.39■□□□□ 0.05
COL4A3-205ENST00000471862 COL15A1P39059 1388 aa15.38■□□□□ 0.05
COL4A3-205ENST00000471862 TM4SF1P30408 202 aa15.37■□□□□ 0.05
COL4A3-205ENST00000471862 TGFB2P61812 414 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms