RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 TAF1LQ8IZX4 1826 aa17.79■□□□□ 0.44
LTA-215ENST00000471842 HMGB2P26583 209 aaKnown RBP17.79■□□□□ 0.44
LTA-215ENST00000471842 LINC00116Q8NCU8 138 aa17.79■□□□□ 0.44
LTA-215ENST00000471842 ATG3Q9NT62 314 aa17.79■□□□□ 0.44
LTA-215ENST00000471842 ERVV-2B6SEH9 535 aa17.78■□□□□ 0.44
LTA-215ENST00000471842 DIAPH1O60610 1272 aaKnown RBP17.78■□□□□ 0.44
LTA-215ENST00000471842 U2SURPO15042 1029 aaKnown RBP17.77■□□□□ 0.44
LTA-215ENST00000471842 GNPATO15228 680 aa17.77■□□□□ 0.44
LTA-215ENST00000471842 ITPK1Q13572 414 aa17.77■□□□□ 0.44
LTA-215ENST00000471842 FLAD1Q8NFF5 587 aa17.77■□□□□ 0.44
LTA-215ENST00000471842 KDRP35968 1356 aa17.76■□□□□ 0.43
LTA-215ENST00000471842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.75■□□□□ 0.43
LTA-215ENST00000471842 AMIGO3Q86WK7 504 aa17.75■□□□□ 0.43
LTA-215ENST00000471842 GPR162Q16538 588 aa17.75■□□□□ 0.43
LTA-215ENST00000471842 PTCD1O75127 700 aaKnown RBP17.74■□□□□ 0.43
LTA-215ENST00000471842 NLGN2Q8NFZ4 835 aa17.74■□□□□ 0.43
LTA-215ENST00000471842 MAP3K5Q99683 1374 aa17.73■□□□□ 0.43
LTA-215ENST00000471842 NFATC2IPQ8NCF5 419 aa17.73■□□□□ 0.43
LTA-215ENST00000471842 NPC1L1Q9UHC9 1359 aa17.72■□□□□ 0.43
LTA-215ENST00000471842 AKAP4Q5JQC9 854 aa17.72■□□□□ 0.43
LTA-215ENST00000471842 SSFA2P28290 1259 aa17.71■□□□□ 0.43
LTA-215ENST00000471842 COL24A1Q17RW2 1714 aa17.71■□□□□ 0.43
LTA-215ENST00000471842 UBR3Q6ZT12 1888 aa17.71■□□□□ 0.43
LTA-215ENST00000471842 CFAP53Q96M91 514 aa17.7■□□□□ 0.42
LTA-215ENST00000471842 COL3A1P02461 1466 aaPredicted RBP17.7■□□□□ 0.42
LTA-215ENST00000471842 MTHFSDQ2M296 383 aaKnown RBP17.69■□□□□ 0.42
LTA-215ENST00000471842 SLC4A9Q96Q91 983 aa17.69■□□□□ 0.42
LTA-215ENST00000471842 LGR6Q9HBX8 967 aa17.69■□□□□ 0.42
LTA-215ENST00000471842 RTCBQ9Y3I0 505 aaKnown RBP17.69■□□□□ 0.42
LTA-215ENST00000471842 SCN11AQ9UI33 1791 aa17.67■□□□□ 0.42
LTA-215ENST00000471842 RNMTO43148 476 aaKnown RBP17.67■□□□□ 0.42
LTA-215ENST00000471842 TRAPPC3LQ5T215 181 aa17.67■□□□□ 0.42
LTA-215ENST00000471842 SLC52A2Q9HAB3 445 aa17.67■□□□□ 0.42
LTA-215ENST00000471842 WWC3Q9ULE0 1092 aa17.67■□□□□ 0.42
LTA-215ENST00000471842 COL5A3P25940 1745 aaPredicted RBP17.65■□□□□ 0.42
LTA-215ENST00000471842 SLC39A6Q13433 755 aa17.65■□□□□ 0.42
LTA-215ENST00000471842 PPP2R1AP30153 589 aa17.64■□□□□ 0.41
LTA-215ENST00000471842 CNTNAP4Q9C0A0 1308 aa17.64■□□□□ 0.41
LTA-215ENST00000471842 RFC4P35249 363 aa17.63■□□□□ 0.41
LTA-215ENST00000471842 CRKLP46109 303 aaKnown RBP17.63■□□□□ 0.41
LTA-215ENST00000471842 TJP1Q07157 1748 aa17.63■□□□□ 0.41
LTA-215ENST00000471842 ZNF831Q5JPB2 1677 aa17.63■□□□□ 0.41
LTA-215ENST00000471842 NUDCQ9Y266 331 aa17.63■□□□□ 0.41
LTA-215ENST00000471842 MRC1P22897 1456 aa17.63■□□□□ 0.41
LTA-215ENST00000471842 MMP10P09238 476 aa17.63■□□□□ 0.41
LTA-215ENST00000471842 U2AF1L5P0DN76 240 aaPredicted RBP17.63■□□□□ 0.41
LTA-215ENST00000471842 PRKAR2BP31323 418 aa17.63■□□□□ 0.41
LTA-215ENST00000471842 U2AF1Q01081 240 aaKnown RBP eCLIP17.63■□□□□ 0.41
LTA-215ENST00000471842 ARHGEF1Q92888 912 aaKnown RBP17.63■□□□□ 0.41
LTA-215ENST00000471842 RC3H1Q5TC82 1133 aaKnown RBP17.62■□□□□ 0.41
LTA-215ENST00000471842 GAS2L2Q8NHY3 880 aa17.62■□□□□ 0.41
LTA-215ENST00000471842 CD2APQ9Y5K6 639 aa17.62■□□□□ 0.41
LTA-215ENST00000471842 RPS6KA4O75676 772 aa17.61■□□□□ 0.41
LTA-215ENST00000471842 YBX3P16989 372 aaKnown RBP eCLIP17.61■□□□□ 0.41
LTA-215ENST00000471842 TEFQ10587 303 aa17.61■□□□□ 0.41
LTA-215ENST00000471842 DNAJC10Q8IXB1 793 aa17.61■□□□□ 0.41
LTA-215ENST00000471842 TTC5Q8N0Z6 440 aa17.61■□□□□ 0.41
LTA-215ENST00000471842 CICQ96RK0 1608 aaPredicted RBP17.6■□□□□ 0.41
LTA-215ENST00000471842 GNAT3A8MTJ3 354 aa17.6■□□□□ 0.41
LTA-215ENST00000471842 ADRA2BP18089 450 aa17.6■□□□□ 0.41
LTA-215ENST00000471842 VIRMAQ69YN4 1812 aaKnown RBP17.59■□□□□ 0.41
LTA-215ENST00000471842 SRP68Q9UHB9 627 aaKnown RBP17.59■□□□□ 0.41
LTA-215ENST00000471842 C4AP0C0L4 1744 aa17.58■□□□□ 0.41
LTA-215ENST00000471842 RSPH6AQ9H0K4 717 aa17.58■□□□□ 0.41
LTA-215ENST00000471842 CCDC87Q9NVE4 849 aa17.58■□□□□ 0.41
LTA-215ENST00000471842 KCPQ6ZWJ8 1503 aa17.58■□□□□ 0.4
LTA-215ENST00000471842 GYS1P13807 737 aa17.57■□□□□ 0.4
LTA-215ENST00000471842 NLGN1Q8N2Q7 840 aa17.57■□□□□ 0.4
LTA-215ENST00000471842 ZNF784Q8NCA9 323 aaPredicted RBP17.57■□□□□ 0.4
LTA-215ENST00000471842 PHACTR3Q96KR7 559 aa17.57■□□□□ 0.4
LTA-215ENST00000471842 PARP3Q9Y6F1 533 aa17.57■□□□□ 0.4
LTA-215ENST00000471842 ADAMTS7Q9UKP4 1686 aa17.57■□□□□ 0.4
LTA-215ENST00000471842 UTRNP46939 3433 aa17.57■□□□□ 0.4
LTA-215ENST00000471842 GRIN3BO60391 1043 aa17.56■□□□□ 0.4
LTA-215ENST00000471842 INTS5Q6P9B9 1019 aaKnown RBP17.56■□□□□ 0.4
LTA-215ENST00000471842 IL17REQ8NFR9 667 aa17.56■□□□□ 0.4
LTA-215ENST00000471842 ZNF330Q9Y3S2 320 aaPredicted RBP17.55■□□□□ 0.4
LTA-215ENST00000471842 MYH14Q7Z406 1995 aaKnown RBP17.54■□□□□ 0.4
LTA-215ENST00000471842 ZPR1O75312 459 aa17.54■□□□□ 0.4
LTA-215ENST00000471842 CYP19A1P11511 503 aaPredicted RBP17.54■□□□□ 0.4
LTA-215ENST00000471842 CANXP27824 592 aaKnown RBP17.54■□□□□ 0.4
LTA-215ENST00000471842 RTF1Q92541 710 aaKnown RBP17.54■□□□□ 0.4
LTA-215ENST00000471842 USP42Q9H9J4 1324 aaKnown RBP17.53■□□□□ 0.4
LTA-215ENST00000471842 CHD4Q14839 1912 aa17.53■□□□□ 0.4
LTA-215ENST00000471842 FKBP8Q14318 412 aa17.53■□□□□ 0.4
LTA-215ENST00000471842 ZBTB1Q9Y2K1 713 aa17.53■□□□□ 0.4
LTA-215ENST00000471842 COL15A1P39059 1388 aa17.52■□□□□ 0.4
LTA-215ENST00000471842 NEFMP07197 916 aa17.52■□□□□ 0.4
LTA-215ENST00000471842 USPL1Q5W0Q7 1092 aa17.52■□□□□ 0.4
LTA-215ENST00000471842 MCM10Q7L590 875 aa17.52■□□□□ 0.4
LTA-215ENST00000471842 SOS1Q07889 1333 aaPredicted RBP17.52■□□□□ 0.39
LTA-215ENST00000471842 GOLGB1Q14789 3259 aaKnown RBP17.52■□□□□ 0.39
LTA-215ENST00000471842 BTBD11A6QL63 1104 aa17.51■□□□□ 0.39
LTA-215ENST00000471842 ZNF790Q6PG37 636 aa17.51■□□□□ 0.39
LTA-215ENST00000471842 ZNF496Q96IT1 587 aaPredicted RBP17.51■□□□□ 0.39
LTA-215ENST00000471842 C10orf71Q711Q0 1435 aa17.51■□□□□ 0.39
LTA-215ENST00000471842 UBR2Q8IWV8 1755 aa17.51■□□□□ 0.39
LTA-215ENST00000471842 PXDNLA1KZ92 1463 aa17.51■□□□□ 0.39
LTA-215ENST00000471842 A0A0G2JLW4 131 aa17.5■□□□□ 0.39
LTA-215ENST00000471842 FCHSD2O94868 740 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms