RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 JARID2Q92833 1246 aaPredicted RBP13.15□□□□□ -0.3
CHMP2B-203ENST00000471660 EFCC1Q9HA90 598 aa13.15□□□□□ -0.3
CHMP2B-203ENST00000471660 CLGNO14967 610 aa13.14□□□□□ -0.31
CHMP2B-203ENST00000471660 PRIM1P49642 420 aaKnown RBP13.14□□□□□ -0.31
CHMP2B-203ENST00000471660 MFAP1P55081 439 aaKnown RBP13.14□□□□□ -0.31
CHMP2B-203ENST00000471660 ADAMTS8Q9UP79 889 aa13.14□□□□□ -0.31
CHMP2B-203ENST00000471660 NOLC1Q14978 699 aaKnown RBP eCLIP13.14□□□□□ -0.31
CHMP2B-203ENST00000471660 LRSAM1Q6UWE0 723 aa13.14□□□□□ -0.31
CHMP2B-203ENST00000471660 EVC2Q86UK5 1308 aa13.14□□□□□ -0.31
CHMP2B-203ENST00000471660 ONECUT3O60422 494 aaPredicted RBP13.13□□□□□ -0.31
CHMP2B-203ENST00000471660 BCAR3O75815 825 aa13.13□□□□□ -0.31
CHMP2B-203ENST00000471660 PSEN1P49768 467 aa13.13□□□□□ -0.31
CHMP2B-203ENST00000471660 PLCH1Q4KWH8 1693 aa13.13□□□□□ -0.31
CHMP2B-203ENST00000471660 POLR3AO14802 1390 aaPredicted RBP13.13□□□□□ -0.31
CHMP2B-203ENST00000471660 AXDND1Q5T1B0 1012 aaPredicted RBP13.13□□□□□ -0.31
CHMP2B-203ENST00000471660 DDX17Q92841 729 aaKnown RBP13.13□□□□□ -0.31
CHMP2B-203ENST00000471660 E9PSI1 815 aa13.12□□□□□ -0.31
CHMP2B-203ENST00000471660 IGSF3O75054 1194 aa13.12□□□□□ -0.31
CHMP2B-203ENST00000471660 SSFA2P28290 1259 aa13.12□□□□□ -0.31
CHMP2B-203ENST00000471660 TERF2Q15554 542 aa13.12□□□□□ -0.31
CHMP2B-203ENST00000471660 CAVIN1Q6NZI2 390 aaKnown RBP13.12□□□□□ -0.31
CHMP2B-203ENST00000471660 CHMP4AQ9BY43 222 aa13.12□□□□□ -0.31
CHMP2B-203ENST00000471660 DIAPH3Q9NSV4 1193 aa13.12□□□□□ -0.31
CHMP2B-203ENST00000471660 PPP2R1AP30153 589 aa13.12□□□□□ -0.31
CHMP2B-203ENST00000471660 RWDD1Q9H446 243 aaPredicted RBP13.12□□□□□ -0.31
CHMP2B-203ENST00000471660 LMBRD1Q9NUN5 540 aa13.12□□□□□ -0.31
CHMP2B-203ENST00000471660 AMOTL2Q9Y2J4 779 aa13.11□□□□□ -0.31
CHMP2B-203ENST00000471660 DHX37Q8IY37 1157 aaKnown RBP13.11□□□□□ -0.31
CHMP2B-203ENST00000471660 SIRT1Q96EB6 747 aa13.11□□□□□ -0.31
CHMP2B-203ENST00000471660 PPP1R1BQ9UD71 204 aaPredicted RBP13.11□□□□□ -0.31
CHMP2B-203ENST00000471660 DDX41Q9UJV9 622 aaKnown RBP13.11□□□□□ -0.31
CHMP2B-203ENST00000471660 MORC2Q9Y6X9 1032 aaPredicted RBP13.11□□□□□ -0.31
CHMP2B-203ENST00000471660 K7ELQ4 463 aaPredicted RBP13.1□□□□□ -0.31
CHMP2B-203ENST00000471660 SLC34A2O95436 690 aa13.1□□□□□ -0.31
CHMP2B-203ENST00000471660 EN1Q05925 392 aaPredicted RBP13.1□□□□□ -0.31
CHMP2B-203ENST00000471660 CTNNA3Q9UI47 895 aa13.1□□□□□ -0.31
CHMP2B-203ENST00000471660 NRXN3Q9Y4C0 1643 aa13.1□□□□□ -0.31
CHMP2B-203ENST00000471660 ANKRD36BQ8N2N9 1353 aa13.1□□□□□ -0.31
CHMP2B-203ENST00000471660 TRIM6-TRIM34B2RNG4 842 aa13.09□□□□□ -0.31
CHMP2B-203ENST00000471660 VPS72Q15906 364 aa13.09□□□□□ -0.31
CHMP2B-203ENST00000471660 TRIM34Q9BYJ4 488 aa13.09□□□□□ -0.31
CHMP2B-203ENST00000471660 COG6Q9Y2V7 657 aa13.09□□□□□ -0.31
CHMP2B-203ENST00000471660 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
CHMP2B-203ENST00000471660 KNDC1Q76NI1 1749 aa13.09□□□□□ -0.31
CHMP2B-203ENST00000471660 SOX12O15370 315 aa13.09□□□□□ -0.31
CHMP2B-203ENST00000471660 WDR43Q15061 677 aaKnown RBP eCLIP13.09□□□□□ -0.31
CHMP2B-203ENST00000471660 SPON1Q9HCB6 807 aa13.09□□□□□ -0.31
CHMP2B-203ENST00000471660 PXDNQ92626 1479 aa13.09□□□□□ -0.31
CHMP2B-203ENST00000471660 CYP2E1P05181 493 aaPredicted RBP13.08□□□□□ -0.32
CHMP2B-203ENST00000471660 PTMAP06454 111 aaKnown RBP13.08□□□□□ -0.32
CHMP2B-203ENST00000471660 HDAC5Q9UQL6 1122 aa13.08□□□□□ -0.32
CHMP2B-203ENST00000471660 ANKRD26Q9UPS8 1709 aa13.08□□□□□ -0.32
CHMP2B-203ENST00000471660 CHGAP10645 457 aaKnown RBP13.08□□□□□ -0.32
CHMP2B-203ENST00000471660 NUCB2P80303 420 aa13.08□□□□□ -0.32
CHMP2B-203ENST00000471660 GIGYF1O75420 1035 aaPredicted RBP13.07□□□□□ -0.32
CHMP2B-203ENST00000471660 ZNF622Q969S3 477 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHMP2B-203ENST00000471660 CC2D1BQ5T0F9 858 aaKnown RBP13.07□□□□□ -0.32
CHMP2B-203ENST00000471660 PANK1Q8TE04 598 aa13.07□□□□□ -0.32
CHMP2B-203ENST00000471660 KIF2CQ99661 725 aa13.07□□□□□ -0.32
CHMP2B-203ENST00000471660 EP400Q96L91 3159 aa13.07□□□□□ -0.32
CHMP2B-203ENST00000471660 CHAF1AQ13111 956 aaPredicted RBP13.06□□□□□ -0.32
CHMP2B-203ENST00000471660 FEZ2Q9UHY8 353 aaPredicted RBP13.06□□□□□ -0.32
CHMP2B-203ENST00000471660 TULP4Q9NRJ4 1543 aa13.06□□□□□ -0.32
CHMP2B-203ENST00000471660 NRAPQ86VF7 1730 aa13.06□□□□□ -0.32
CHMP2B-203ENST00000471660 KCNQ2O43526 872 aa13.06□□□□□ -0.32
CHMP2B-203ENST00000471660 YTHDC2Q9H6S0 1430 aaKnown RBP13.06□□□□□ -0.32
CHMP2B-203ENST00000471660 NRKQ7Z2Y5 1582 aa13.06□□□□□ -0.32
CHMP2B-203ENST00000471660 CASZ1Q86V15 1759 aa13.05□□□□□ -0.32
CHMP2B-203ENST00000471660 CERS3Q8IU89 383 aa13.05□□□□□ -0.32
CHMP2B-203ENST00000471660 RIOK3O14730 519 aaKnown RBP13.05□□□□□ -0.32
CHMP2B-203ENST00000471660 UVSSAQ2YD98 709 aa13.05□□□□□ -0.32
CHMP2B-203ENST00000471660 MCTP1Q6DN14 999 aa13.05□□□□□ -0.32
CHMP2B-203ENST00000471660 FAM53CQ9NYF3 392 aa13.05□□□□□ -0.32
CHMP2B-203ENST00000471660 THSD7AQ9UPZ6 1657 aa13.05□□□□□ -0.32
CHMP2B-203ENST00000471660 GPT2Q8TD30 523 aa13.04□□□□□ -0.32
CHMP2B-203ENST00000471660 SPINK5Q9NQ38 1064 aaPredicted RBP13.04□□□□□ -0.32
CHMP2B-203ENST00000471660 ABCC11Q96J66 1382 aa13.04□□□□□ -0.32
CHMP2B-203ENST00000471660 FAM177BA6PVY3 158 aa13.04□□□□□ -0.32
CHMP2B-203ENST00000471660 NCBP1Q09161 790 aaKnown RBP13.04□□□□□ -0.32
CHMP2B-203ENST00000471660 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
CHMP2B-203ENST00000471660 KIF16BQ96L93 1317 aa13.04□□□□□ -0.32
CHMP2B-203ENST00000471660 AEBP1Q8IUX7 1158 aa13.03□□□□□ -0.32
CHMP2B-203ENST00000471660 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
CHMP2B-203ENST00000471660 CAMKK2Q96RR4 588 aa13.03□□□□□ -0.32
CHMP2B-203ENST00000471660 CTR9Q6PD62 1173 aa13.03□□□□□ -0.32
CHMP2B-203ENST00000471660 KRT222Q8N1A0 295 aa13.03□□□□□ -0.32
CHMP2B-203ENST00000471660 TECPR2O15040 1411 aa13.03□□□□□ -0.32
CHMP2B-203ENST00000471660 EZH2Q15910 746 aaKnown RBP13.02□□□□□ -0.32
CHMP2B-203ENST00000471660 FAM184AQ8NB25 1140 aa13.02□□□□□ -0.32
CHMP2B-203ENST00000471660 ABCA3Q99758 1704 aa13.02□□□□□ -0.32
CHMP2B-203ENST00000471660 MBD3O95983 291 aa13.02□□□□□ -0.33
CHMP2B-203ENST00000471660 KIF18AQ8NI77 898 aa13.02□□□□□ -0.33
CHMP2B-203ENST00000471660 TMEM63CQ9P1W3 806 aa13.02□□□□□ -0.33
CHMP2B-203ENST00000471660 NPHP3Q7Z494 1330 aa13.02□□□□□ -0.33
CHMP2B-203ENST00000471660 NSD3Q9BZ95 1437 aa13.02□□□□□ -0.33
CHMP2B-203ENST00000471660 ATP7BP35670 1465 aa13.02□□□□□ -0.33
CHMP2B-203ENST00000471660 AK9Q5TCS8 1911 aa13.01□□□□□ -0.33
CHMP2B-203ENST00000471660 CD2BP2O95400 341 aaKnown RBP13.01□□□□□ -0.33
CHMP2B-203ENST00000471660 SAMD1Q6SPF0 538 aaPredicted RBP13.01□□□□□ -0.33
CHMP2B-203ENST00000471660 CFAP53Q96M91 514 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms