RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 ATP6V1AP38606 617 aa20.24■□□□□ 0.83
VPS8-221ENST00000471655 CABP4P57796 275 aa20.24■□□□□ 0.83
VPS8-221ENST00000471655 ITPK1Q13572 414 aa20.24■□□□□ 0.83
VPS8-221ENST00000471655 AKAP4Q5JQC9 854 aa20.24■□□□□ 0.83
VPS8-221ENST00000471655 LINC00116Q8NCU8 138 aa20.24■□□□□ 0.83
VPS8-221ENST00000471655 SSFA2P28290 1259 aa20.23■□□□□ 0.83
VPS8-221ENST00000471655 UBR3Q6ZT12 1888 aa20.22■□□□□ 0.83
VPS8-221ENST00000471655 COL3A1P02461 1466 aaPredicted RBP20.22■□□□□ 0.83
VPS8-221ENST00000471655 HMOX1P09601 288 aa20.21■□□□□ 0.83
VPS8-221ENST00000471655 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.2■□□□□ 0.82
VPS8-221ENST00000471655 AMIGO3Q86WK7 504 aa20.2■□□□□ 0.82
VPS8-221ENST00000471655 NFATC2IPQ8NCF5 419 aa20.2■□□□□ 0.82
VPS8-221ENST00000471655 SLC4A9Q96Q91 983 aa20.2■□□□□ 0.82
VPS8-221ENST00000471655 SCN11AQ9UI33 1791 aa20.19■□□□□ 0.82
VPS8-221ENST00000471655 RC3H1Q5TC82 1133 aaKnown RBP20.19■□□□□ 0.82
VPS8-221ENST00000471655 RBM42Q9BTD8 480 aaKnown RBP20.19■□□□□ 0.82
VPS8-221ENST00000471655 GNPATO15228 680 aa20.17■□□□□ 0.82
VPS8-221ENST00000471655 YY1P25490 414 aa20.17■□□□□ 0.82
VPS8-221ENST00000471655 MTHFSDQ2M296 383 aaKnown RBP20.17■□□□□ 0.82
VPS8-221ENST00000471655 PHF14O94880 888 aa20.16■□□□□ 0.82
VPS8-221ENST00000471655 CNGB1Q14028 1251 aaPredicted RBP20.16■□□□□ 0.82
VPS8-221ENST00000471655 MSL1Q68DK7 614 aa20.16■□□□□ 0.82
VPS8-221ENST00000471655 SLC52A2Q9HAB3 445 aa20.16■□□□□ 0.82
VPS8-221ENST00000471655 CNTNAP4Q9C0A0 1308 aa20.16■□□□□ 0.82
VPS8-221ENST00000471655 RNMTO43148 476 aaKnown RBP20.15■□□□□ 0.82
VPS8-221ENST00000471655 CFAP53Q96M91 514 aa20.15■□□□□ 0.82
VPS8-221ENST00000471655 LGR6Q9HBX8 967 aa20.15■□□□□ 0.82
VPS8-221ENST00000471655 COL5A3P25940 1745 aaPredicted RBP20.14■□□□□ 0.81
VPS8-221ENST00000471655 ADAMTS7Q9UKP4 1686 aa20.14■□□□□ 0.81
VPS8-221ENST00000471655 MRC1P22897 1456 aa20.14■□□□□ 0.81
VPS8-221ENST00000471655 U2SURPO15042 1029 aaKnown RBP20.14■□□□□ 0.81
VPS8-221ENST00000471655 ADRA2BP18089 450 aa20.14■□□□□ 0.81
VPS8-221ENST00000471655 SMIM5Q71RC9 77 aa20.14■□□□□ 0.81
VPS8-221ENST00000471655 RTCBQ9Y3I0 505 aaKnown RBP20.14■□□□□ 0.81
VPS8-221ENST00000471655 CD2APQ9Y5K6 639 aa20.14■□□□□ 0.81
VPS8-221ENST00000471655 CICQ96RK0 1608 aaPredicted RBP20.13■□□□□ 0.81
VPS8-221ENST00000471655 PPP2R1AP30153 589 aa20.13■□□□□ 0.81
VPS8-221ENST00000471655 KLHL34Q8N239 644 aa20.13■□□□□ 0.81
VPS8-221ENST00000471655 PTCD1O75127 700 aaKnown RBP20.12■□□□□ 0.81
VPS8-221ENST00000471655 RPS6KA4O75676 772 aa20.12■□□□□ 0.81
VPS8-221ENST00000471655 TRAPPC3LQ5T215 181 aa20.12■□□□□ 0.81
VPS8-221ENST00000471655 NLGN2Q8NFZ4 835 aa20.12■□□□□ 0.81
VPS8-221ENST00000471655 GAS2L2Q8NHY3 880 aa20.11■□□□□ 0.81
VPS8-221ENST00000471655 GPR162Q16538 588 aa20.1■□□□□ 0.81
VPS8-221ENST00000471655 NUDCQ9Y266 331 aa20.1■□□□□ 0.81
VPS8-221ENST00000471655 ARHGEF1Q92888 912 aaKnown RBP20.09■□□□□ 0.81
VPS8-221ENST00000471655 VIRMAQ69YN4 1812 aaKnown RBP20.09■□□□□ 0.81
VPS8-221ENST00000471655 NLGN1Q8N2Q7 840 aa20.08■□□□□ 0.81
VPS8-221ENST00000471655 TJP1Q07157 1748 aa20.07■□□□□ 0.8
VPS8-221ENST00000471655 MYH14Q7Z406 1995 aaKnown RBP20.07■□□□□ 0.8
VPS8-221ENST00000471655 GNAT3A8MTJ3 354 aa20.07■□□□□ 0.8
VPS8-221ENST00000471655 CRKLP46109 303 aaKnown RBP20.07■□□□□ 0.8
VPS8-221ENST00000471655 RSPH6AQ9H0K4 717 aa20.07■□□□□ 0.8
VPS8-221ENST00000471655 RFC4P35249 363 aa20.06■□□□□ 0.8
VPS8-221ENST00000471655 VSIG10Q8N0Z9 540 aa20.06■□□□□ 0.8
VPS8-221ENST00000471655 CHD4Q14839 1912 aa20.06■□□□□ 0.8
VPS8-221ENST00000471655 FCHSD2O94868 740 aa20.05■□□□□ 0.8
VPS8-221ENST00000471655 PRKAR2BP31323 418 aa20.05■□□□□ 0.8
VPS8-221ENST00000471655 SLC39A6Q13433 755 aa20.05■□□□□ 0.8
VPS8-221ENST00000471655 IL17REQ8NFR9 667 aa20.05■□□□□ 0.8
VPS8-221ENST00000471655 KCPQ6ZWJ8 1503 aa20.04■□□□□ 0.8
VPS8-221ENST00000471655 GRIN3BO60391 1043 aa20.04■□□□□ 0.8
VPS8-221ENST00000471655 GYS1P13807 737 aa20.04■□□□□ 0.8
VPS8-221ENST00000471655 INTS5Q6P9B9 1019 aaKnown RBP20.04■□□□□ 0.8
VPS8-221ENST00000471655 PHACTR3Q96KR7 559 aa20.04■□□□□ 0.8
VPS8-221ENST00000471655 MMP10P09238 476 aa20.03■□□□□ 0.8
VPS8-221ENST00000471655 U2AF1L5P0DN76 240 aaPredicted RBP20.03■□□□□ 0.8
VPS8-221ENST00000471655 U2AF1Q01081 240 aaKnown RBP eCLIP20.03■□□□□ 0.8
VPS8-221ENST00000471655 DNAJC10Q8IXB1 793 aa20.03■□□□□ 0.8
VPS8-221ENST00000471655 CYP19A1P11511 503 aaPredicted RBP20.02■□□□□ 0.8
VPS8-221ENST00000471655 TEFQ10587 303 aa20.02■□□□□ 0.8
VPS8-221ENST00000471655 CCDC87Q9NVE4 849 aa20.02■□□□□ 0.8
VPS8-221ENST00000471655 CEMIPQ8WUJ3 1361 aa20.02■□□□□ 0.8
VPS8-221ENST00000471655 UBR2Q8IWV8 1755 aa20.01■□□□□ 0.79
VPS8-221ENST00000471655 YBX3P16989 372 aaKnown RBP eCLIP20.01■□□□□ 0.79
VPS8-221ENST00000471655 PELP1Q8IZL8 1130 aaKnown RBP20.01■□□□□ 0.79
VPS8-221ENST00000471655 C4AP0C0L4 1744 aa20.01■□□□□ 0.79
VPS8-221ENST00000471655 TTC5Q8N0Z6 440 aa20■□□□□ 0.79
VPS8-221ENST00000471655 USP42Q9H9J4 1324 aaKnown RBP20■□□□□ 0.79
VPS8-221ENST00000471655 UTRNP46939 3433 aa19.99■□□□□ 0.79
VPS8-221ENST00000471655 SIPA1L3O60292 1781 aaPredicted RBP19.99■□□□□ 0.79
VPS8-221ENST00000471655 ZNF790Q6PG37 636 aa19.99■□□□□ 0.79
VPS8-221ENST00000471655 KIF13BQ9NQT8 1826 aa19.98■□□□□ 0.79
VPS8-221ENST00000471655 SOS1Q07889 1333 aaPredicted RBP19.98■□□□□ 0.79
VPS8-221ENST00000471655 HTATSF1O43719 755 aaKnown RBP19.97■□□□□ 0.79
VPS8-221ENST00000471655 TGFB2P61812 414 aa19.97■□□□□ 0.79
VPS8-221ENST00000471655 ZNF784Q8NCA9 323 aaPredicted RBP19.97■□□□□ 0.79
VPS8-221ENST00000471655 TEX13AQ9BXU3 409 aaPredicted RBP19.97■□□□□ 0.79
VPS8-221ENST00000471655 STARD3NLO95772 234 aa19.96■□□□□ 0.79
VPS8-221ENST00000471655 ZNF496Q96IT1 587 aaPredicted RBP19.96■□□□□ 0.79
VPS8-221ENST00000471655 SRP68Q9UHB9 627 aaKnown RBP19.96■□□□□ 0.79
VPS8-221ENST00000471655 PARP3Q9Y6F1 533 aa19.96■□□□□ 0.79
VPS8-221ENST00000471655 HEG1Q9ULI3 1381 aa19.95■□□□□ 0.79
VPS8-221ENST00000471655 C10orf71Q711Q0 1435 aa19.94■□□□□ 0.78
VPS8-221ENST00000471655 ZPR1O75312 459 aa19.94■□□□□ 0.78
VPS8-221ENST00000471655 FKBP8Q14318 412 aa19.94■□□□□ 0.78
VPS8-221ENST00000471655 RALBP1Q15311 655 aa19.94■□□□□ 0.78
VPS8-221ENST00000471655 RTF1Q92541 710 aaKnown RBP19.94■□□□□ 0.78
VPS8-221ENST00000471655 NARFQ9UHQ1 456 aa19.94■□□□□ 0.78
VPS8-221ENST00000471655 ZBTB1Q9Y2K1 713 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms