RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 TBC1D2BQ9UPU7 963 aa8.91□□□□□ -0.98
RBM39-228ENST00000471635 ZNF330Q9Y3S2 320 aaPredicted RBP8.91□□□□□ -0.98
RBM39-228ENST00000471635 GNB5O14775 395 aa8.9□□□□□ -0.98
RBM39-228ENST00000471635 CFHR5Q9BXR6 569 aa8.9□□□□□ -0.98
RBM39-228ENST00000471635 NUCKS1Q9H1E3 243 aaKnown RBP8.9□□□□□ -0.98
RBM39-228ENST00000471635 LINC00114Q6XXX2 140 aa8.89□□□□□ -0.99
RBM39-228ENST00000471635 GOLGA6L1Q8N7Z2 621 aa8.89□□□□□ -0.99
RBM39-228ENST00000471635 EDARADDQ8WWZ3 215 aa8.89□□□□□ -0.99
RBM39-228ENST00000471635 MCCD1P59942 119 aaPredicted RBP8.88□□□□□ -0.99
RBM39-228ENST00000471635 SUV39H2Q9H5I1 410 aa8.88□□□□□ -0.99
RBM39-228ENST00000471635 NOP53Q9NZM5 478 aaKnown RBP8.88□□□□□ -0.99
RBM39-228ENST00000471635 SCO2A0A1W2PP80 73 aa8.87□□□□□ -0.99
RBM39-228ENST00000471635 ATP5J2-PTCD1G3V325 749 aa8.87□□□□□ -0.99
RBM39-228ENST00000471635 CHRNA4P43681 627 aa8.87□□□□□ -0.99
RBM39-228ENST00000471635 WDR44Q5JSH3 913 aa8.87□□□□□ -0.99
RBM39-228ENST00000471635 RNF20Q5VTR2 975 aa8.87□□□□□ -0.99
RBM39-228ENST00000471635 C1orf229Q6ZS94 237 aaPredicted RBP8.87□□□□□ -0.99
RBM39-228ENST00000471635 ZNF592Q92610 1267 aa8.87□□□□□ -0.99
RBM39-228ENST00000471635 KLRG1Q96E93 195 aa8.87□□□□□ -0.99
RBM39-228ENST00000471635 PHF24Q9UPV7 400 aa8.87□□□□□ -0.99
RBM39-228ENST00000471635 HOXB4P17483 251 aaPredicted RBP8.86□□□□□ -0.99
RBM39-228ENST00000471635 AMPD1P23109 780 aa8.86□□□□□ -0.99
RBM39-228ENST00000471635 KRTAP9-9Q9BYP9 154 aa8.86□□□□□ -0.99
RBM39-228ENST00000471635 KRTAP9-4Q9BYQ2 154 aa8.86□□□□□ -0.99
RBM39-228ENST00000471635 PRM3Q9NNZ6 103 aa8.86□□□□□ -0.99
RBM39-228ENST00000471635 PCDHB11Q9Y5F2 797 aa8.86□□□□□ -0.99
RBM39-228ENST00000471635 MEN1O00255 615 aa8.85□□□□□ -0.99
RBM39-228ENST00000471635 POU4F2Q12837 409 aa8.85□□□□□ -0.99
RBM39-228ENST00000471635 NBPF10Q6P3W6 841 aaKnown RBP8.85□□□□□ -0.99
RBM39-228ENST00000471635 NBPF15Q8N660 670 aa8.85□□□□□ -0.99
RBM39-228ENST00000471635 F11P03951 625 aa8.84□□□□□ -0.99
RBM39-228ENST00000471635 ERVK-9P63128 1117 aa8.84□□□□□ -0.99
RBM39-228ENST00000471635 SLC27A3Q5K4L6 730 aa8.84□□□□□ -0.99
RBM39-228ENST00000471635 CC2D2BQ6DHV5 1058 aa8.84□□□□□ -0.99
RBM39-228ENST00000471635 SLCO4C1Q6ZQN7 724 aa8.84□□□□□ -0.99
RBM39-228ENST00000471635 SCTRP47872 440 aa8.83□□□□□ -1
RBM39-228ENST00000471635 IRF5Q13568 498 aa8.83□□□□□ -1
RBM39-228ENST00000471635 DOC2BQ14184 412 aa8.83□□□□□ -1
RBM39-228ENST00000471635 CCDC125Q86Z20 511 aa8.83□□□□□ -1
RBM39-228ENST00000471635 GDPD2Q9HCC8 539 aa8.83□□□□□ -1
RBM39-228ENST00000471635 SPATA31C2B4DYI2 1134 aa8.82□□□□□ -1
RBM39-228ENST00000471635 ABL2P42684 1182 aa8.82□□□□□ -1
RBM39-228ENST00000471635 TIMMDC1Q9NPL8 285 aa8.82□□□□□ -1
RBM39-228ENST00000471635 CEP126Q9P2H0 1117 aa8.82□□□□□ -1
RBM39-228ENST00000471635 VAC14Q08AM6 782 aa8.81□□□□□ -1
RBM39-228ENST00000471635 NLRP3Q96P20 1036 aa8.81□□□□□ -1
RBM39-228ENST00000471635 ZFP64Q9NPA5 681 aa8.81□□□□□ -1
RBM39-228ENST00000471635 KRTAP4-8A0A0G2JLE6 195 aa8.8□□□□□ -1
RBM39-228ENST00000471635 A0A1W2PRU2 124 aa8.8□□□□□ -1
RBM39-228ENST00000471635 DGKGP49619 791 aa8.8□□□□□ -1
RBM39-228ENST00000471635 EIF4G2P78344 907 aaKnown RBP eCLIP8.8□□□□□ -1
RBM39-228ENST00000471635 MCM6Q14566 821 aa8.8□□□□□ -1
RBM39-228ENST00000471635 CYP2U1Q7Z449 544 aa8.8□□□□□ -1
RBM39-228ENST00000471635 GRIP2Q9C0E4 1043 aa8.8□□□□□ -1
RBM39-228ENST00000471635 ESF1Q9H501 851 aaKnown RBP8.8□□□□□ -1
RBM39-228ENST00000471635 ARTNQ5T4W7 220 aa8.79□□□□□ -1
RBM39-228ENST00000471635 TAS1R3Q7RTX0 852 aa8.79□□□□□ -1
RBM39-228ENST00000471635 CCDC85AQ96PX6 553 aaPredicted RBP8.79□□□□□ -1
RBM39-228ENST00000471635 CDCA7Q9BWT1 371 aaPredicted RBP8.79□□□□□ -1
RBM39-228ENST00000471635 OSBPL3Q9H4L5 887 aa8.79□□□□□ -1
RBM39-228ENST00000471635 WASLO00401 505 aaPredicted RBP8.78□□□□□ -1
RBM39-228ENST00000471635 GATA4P43694 442 aa8.78□□□□□ -1
RBM39-228ENST00000471635 ARHGEF10LQ9HCE6 1279 aa8.78□□□□□ -1
RBM39-228ENST00000471635 TRAK2O60296 914 aa8.77□□□□□ -1.01
RBM39-228ENST00000471635 THBS1P07996 1170 aa8.77□□□□□ -1.01
RBM39-228ENST00000471635 BMP4P12644 408 aa8.77□□□□□ -1.01
RBM39-228ENST00000471635 CLN3Q13286 438 aa8.77□□□□□ -1.01
RBM39-228ENST00000471635 LBRQ14739 615 aaKnown RBP8.77□□□□□ -1.01
RBM39-228ENST00000471635 FOXD4L6Q3SYB3 417 aaPredicted RBP8.77□□□□□ -1.01
RBM39-228ENST00000471635 FOXD4L3Q6VB84 417 aaPredicted RBP8.77□□□□□ -1.01
RBM39-228ENST00000471635 RAB6BQ9NRW1 208 aa8.77□□□□□ -1.01
RBM39-228ENST00000471635 GGA1Q9UJY5 639 aa8.77□□□□□ -1.01
RBM39-228ENST00000471635 SLFNL1Q499Z3 407 aa8.76□□□□□ -1.01
RBM39-228ENST00000471635 NBPF11Q86T75 865 aa8.76□□□□□ -1.01
RBM39-228ENST00000471635 KRTAP19-1Q8IUB9 90 aa8.76□□□□□ -1.01
RBM39-228ENST00000471635 BTBD6Q96KE9 485 aa8.76□□□□□ -1.01
RBM39-228ENST00000471635 ATXN7L1Q9ULK2 861 aaPredicted RBP8.76□□□□□ -1.01
RBM39-228ENST00000471635 MYCP01106 439 aaPredicted RBP8.75□□□□□ -1.01
RBM39-228ENST00000471635 EPXP11678 715 aa8.75□□□□□ -1.01
RBM39-228ENST00000471635 TSGA10IPQ3SY00 556 aa8.75□□□□□ -1.01
RBM39-228ENST00000471635 DOLKQ9UPQ8 538 aa8.75□□□□□ -1.01
RBM39-228ENST00000471635 RSPO4Q2I0M5 234 aaPredicted RBP8.74□□□□□ -1.01
RBM39-228ENST00000471635 WASHC4Q2M389 1173 aa8.74□□□□□ -1.01
RBM39-228ENST00000471635 RNF135Q8IUD6 432 aa8.74□□□□□ -1.01
RBM39-228ENST00000471635 GOLGA2P5Q9HBQ8 144 aa8.74□□□□□ -1.01
RBM39-228ENST00000471635 COG6Q9Y2V7 657 aa8.74□□□□□ -1.01
RBM39-228ENST00000471635 A0A1B0GTH6 734 aa8.73□□□□□ -1.01
RBM39-228ENST00000471635 PHTF2Q8N3S3 785 aa8.73□□□□□ -1.01
RBM39-228ENST00000471635 GPAMQ9HCL2 828 aa8.73□□□□□ -1.01
RBM39-228ENST00000471635 UBAP2LQ14157 1087 aaKnown RBP8.72□□□□□ -1.01
RBM39-228ENST00000471635 OXLD1Q5BKU9 147 aa8.72□□□□□ -1.01
RBM39-228ENST00000471635 NKAPLQ5M9Q1 402 aa8.72□□□□□ -1.01
RBM39-228ENST00000471635 C2CD2LO14523 706 aa8.71□□□□□ -1.02
RBM39-228ENST00000471635 GNRH1P01148 92 aa8.71□□□□□ -1.02
RBM39-228ENST00000471635 SPATA31C1P0DKV0 1188 aa8.71□□□□□ -1.02
RBM39-228ENST00000471635 ARAFP10398 606 aa8.71□□□□□ -1.02
RBM39-228ENST00000471635 SEMA3FQ13275 785 aa8.71□□□□□ -1.02
RBM39-228ENST00000471635 IL2RAP01589 272 aa8.7□□□□□ -1.02
RBM39-228ENST00000471635 CNKSR1Q969H4 720 aa8.7□□□□□ -1.02
RBM39-228ENST00000471635 POM121Q96HA1 1249 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms