RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 NBPF14Q5TI25 921 aa8.68□□□□□ -1.02
NF1-208ENST00000471572 FAM9AQ8IZU1 332 aaPredicted RBP8.68□□□□□ -1.02
NF1-208ENST00000471572 THAP11Q96EK4 314 aa8.68□□□□□ -1.02
NF1-208ENST00000471572 EVA1BQ9NVM1 165 aa8.68□□□□□ -1.02
NF1-208ENST00000471572 DDX41Q9UJV9 622 aaKnown RBP8.68□□□□□ -1.02
NF1-208ENST00000471572 INPP5FQ9Y2H2 1132 aa8.68□□□□□ -1.02
NF1-208ENST00000471572 hCG_2014768A0A024R1R8 64 aa8.68□□□□□ -1.02
NF1-208ENST00000471572 EIF1AXP47813 144 aaKnown RBP8.68□□□□□ -1.02
NF1-208ENST00000471572 SH3BP5LQ7L8J4 393 aa8.68□□□□□ -1.02
NF1-208ENST00000471572 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.68□□□□□ -1.02
NF1-208ENST00000471572 M0R2N6 131 aa8.67□□□□□ -1.02
NF1-208ENST00000471572 CCNYL3P0C7X3 344 aa8.67□□□□□ -1.02
NF1-208ENST00000471572 DZIP3Q86Y13 1208 aaKnown RBP8.67□□□□□ -1.02
NF1-208ENST00000471572 CITED4Q96RK1 184 aa8.67□□□□□ -1.02
NF1-208ENST00000471572 ESPNB1AK53 854 aa8.66□□□□□ -1.02
NF1-208ENST00000471572 FGRP09769 529 aa8.66□□□□□ -1.02
NF1-208ENST00000471572 DMRTB1Q96MA1 342 aa8.66□□□□□ -1.02
NF1-208ENST00000471572 SALL2Q9Y467 1007 aaPredicted RBP8.66□□□□□ -1.02
NF1-208ENST00000471572 RIMBP2O15034 1052 aa8.66□□□□□ -1.02
NF1-208ENST00000471572 PSEN2P49810 448 aa8.66□□□□□ -1.02
NF1-208ENST00000471572 IGBP1P78318 339 aa8.66□□□□□ -1.02
NF1-208ENST00000471572 ZBTB33Q86T24 672 aa8.66□□□□□ -1.02
NF1-208ENST00000471572 ARMC2Q8NEN0 867 aa8.66□□□□□ -1.02
NF1-208ENST00000471572 CFHR5Q9BXR6 569 aa8.66□□□□□ -1.02
NF1-208ENST00000471572 HAX1O00165 279 aa8.65□□□□□ -1.02
NF1-208ENST00000471572 IGFBP4P22692 258 aa8.65□□□□□ -1.02
NF1-208ENST00000471572 FGD1P98174 961 aa8.65□□□□□ -1.02
NF1-208ENST00000471572 ALKBH8Q96BT7 664 aaKnown RBP8.65□□□□□ -1.02
NF1-208ENST00000471572 ZNF358Q9NW07 568 aa8.65□□□□□ -1.02
NF1-208ENST00000471572 RIPOR2Q9Y4F9 1068 aa8.65□□□□□ -1.02
NF1-208ENST00000471572 FOXO3O43524 673 aa8.64□□□□□ -1.03
NF1-208ENST00000471572 PARNO95453 639 aaKnown RBP8.64□□□□□ -1.03
NF1-208ENST00000471572 ENOX2Q16206 610 aaKnown RBP8.64□□□□□ -1.03
NF1-208ENST00000471572 CARD14Q9BXL6 1004 aa8.64□□□□□ -1.03
NF1-208ENST00000471572 POTEHQ6S545 545 aa8.64□□□□□ -1.03
NF1-208ENST00000471572 DCBLD2Q96PD2 775 aa8.64□□□□□ -1.03
NF1-208ENST00000471572 NUDT12Q9BQG2 462 aa8.64□□□□□ -1.03
NF1-208ENST00000471572 SRA1Q9HD15 236 aaKnown RBP8.64□□□□□ -1.03
NF1-208ENST00000471572 CYLDQ9NQC7 956 aa8.64□□□□□ -1.03
NF1-208ENST00000471572 LOC102724159A0A0B4J2E5 919 aa8.63□□□□□ -1.03
NF1-208ENST00000471572 PNMA6FA0A0J9YX94 578 aa8.63□□□□□ -1.03
NF1-208ENST00000471572 TNFRSF10BO14763 440 aa8.63□□□□□ -1.03
NF1-208ENST00000471572 PWP2Q15269 919 aaKnown RBP8.63□□□□□ -1.03
NF1-208ENST00000471572 CC2D2BQ6DHV5 1058 aa8.63□□□□□ -1.03
NF1-208ENST00000471572 SCUBE3Q8IX30 993 aa8.63□□□□□ -1.03
NF1-208ENST00000471572 GNA15P30679 374 aa8.63□□□□□ -1.03
NF1-208ENST00000471572 ATP2B2Q01814 1243 aa8.63□□□□□ -1.03
NF1-208ENST00000471572 USP4Q13107 963 aa8.63□□□□□ -1.03
NF1-208ENST00000471572 SH3RF1Q7Z6J0 888 aa8.63□□□□□ -1.03
NF1-208ENST00000471572 SCG3Q8WXD2 468 aaKnown RBP8.63□□□□□ -1.03
NF1-208ENST00000471572 CRELD1Q96HD1 420 aa8.63□□□□□ -1.03
NF1-208ENST00000471572 METTL14Q9HCE5 456 aaKnown RBP8.63□□□□□ -1.03
NF1-208ENST00000471572 FAM26DQ5JW98 314 aa8.62□□□□□ -1.03
NF1-208ENST00000471572 C16orf46Q6P387 395 aa8.62□□□□□ -1.03
NF1-208ENST00000471572 NIF3L1Q9GZT8 377 aa8.62□□□□□ -1.03
NF1-208ENST00000471572 PCDHB11Q9Y5F2 797 aa8.62□□□□□ -1.03
NF1-208ENST00000471572 MAGEB6P1A0A0J9YX57 407 aa8.61□□□□□ -1.03
NF1-208ENST00000471572 TMEM229AB2RXF0 380 aa8.61□□□□□ -1.03
NF1-208ENST00000471572 GABBR2O75899 941 aa8.61□□□□□ -1.03
NF1-208ENST00000471572 HSD3B2P26439 372 aa8.61□□□□□ -1.03
NF1-208ENST00000471572 NOP58Q9Y2X3 529 aaKnown RBP8.61□□□□□ -1.03
NF1-208ENST00000471572 DXOO77932 396 aaKnown RBP8.61□□□□□ -1.03
NF1-208ENST00000471572 ITGAEP38570 1179 aa8.61□□□□□ -1.03
NF1-208ENST00000471572 USP48Q86UV5 1035 aa8.61□□□□□ -1.03
NF1-208ENST00000471572 ZNF654Q8IZM8 581 aa8.61□□□□□ -1.03
NF1-208ENST00000471572 PLEKHD1A6NEE1 506 aa8.6□□□□□ -1.03
NF1-208ENST00000471572 ZBTB39O15060 712 aa8.6□□□□□ -1.03
NF1-208ENST00000471572 STK10O94804 968 aaKnown RBP8.6□□□□□ -1.03
NF1-208ENST00000471572 STAU1O95793 577 aaKnown RBP8.6□□□□□ -1.03
NF1-208ENST00000471572 AAMPQ13685 434 aa8.6□□□□□ -1.03
NF1-208ENST00000471572 SOGA3Q5TF21 947 aa8.6□□□□□ -1.03
NF1-208ENST00000471572 TMED8Q6PL24 325 aaPredicted RBP8.6□□□□□ -1.03
NF1-208ENST00000471572 ATCAYQ86WG3 371 aa8.6□□□□□ -1.03
NF1-208ENST00000471572 PRDM9Q9NQV7 894 aa8.6□□□□□ -1.03
NF1-208ENST00000471572 ERFEQ4G0M1 354 aa8.59□□□□□ -1.03
NF1-208ENST00000471572 COX20Q5RI15 118 aa8.59□□□□□ -1.03
NF1-208ENST00000471572 RNF20Q5VTR2 975 aa8.59□□□□□ -1.03
NF1-208ENST00000471572 TNS4Q8IZW8 715 aa8.59□□□□□ -1.03
NF1-208ENST00000471572 ZNF526Q8TF50 670 aaPredicted RBP8.59□□□□□ -1.03
NF1-208ENST00000471572 GJA8P48165 433 aa8.59□□□□□ -1.03
NF1-208ENST00000471572 TSPAN10Q9H1Z9 355 aaPredicted RBP8.59□□□□□ -1.03
NF1-208ENST00000471572 COL4A3BPQ9Y5P4 624 aa8.59□□□□□ -1.03
NF1-208ENST00000471572 SCTRP47872 440 aa8.58□□□□□ -1.04
NF1-208ENST00000471572 EPHA4P54764 986 aa8.58□□□□□ -1.04
NF1-208ENST00000471572 ANAPC15P60006 121 aa8.58□□□□□ -1.04
NF1-208ENST00000471572 NBPF20Q3BBV1 942 aa8.58□□□□□ -1.04
NF1-208ENST00000471572 ALG1LQ6GMV1 187 aa8.58□□□□□ -1.04
NF1-208ENST00000471572 RPUSD2Q8IZ73 545 aaKnown RBP8.58□□□□□ -1.04
NF1-208ENST00000471572 BRINP2Q9C0B6 783 aa8.58□□□□□ -1.04
NF1-208ENST00000471572 STIM2Q9P246 746 aa8.58□□□□□ -1.04
NF1-208ENST00000471572 A0A1W2PRU2 124 aa8.58□□□□□ -1.04
NF1-208ENST00000471572 ATF4P18848 351 aaPredicted RBP8.58□□□□□ -1.04
NF1-208ENST00000471572 SERINC3Q13530 473 aa8.58□□□□□ -1.04
NF1-208ENST00000471572 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
NF1-208ENST00000471572 PTCRAQ6ISU1 281 aaPredicted RBP8.58□□□□□ -1.04
NF1-208ENST00000471572 POTEEQ6S8J3 1075 aa8.58□□□□□ -1.04
NF1-208ENST00000471572 FAM160A2Q8N612 972 aaPredicted RBP8.58□□□□□ -1.04
NF1-208ENST00000471572 CHMP7Q8WUX9 453 aaPredicted RBP8.58□□□□□ -1.04
NF1-208ENST00000471572 PSMD1Q99460 953 aa8.58□□□□□ -1.04
NF1-208ENST00000471572 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms