RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 PHF14O94880 888 aa20■□□□□ 0.79
HOXB3-206ENST00000471459 SSFA2P28290 1259 aa19.99■□□□□ 0.79
HOXB3-206ENST00000471459 LINC00116Q8NCU8 138 aa19.99■□□□□ 0.79
HOXB3-206ENST00000471459 ITGB4P16144 1822 aa19.98■□□□□ 0.79
HOXB3-206ENST00000471459 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.98■□□□□ 0.79
HOXB3-206ENST00000471459 GNPATO15228 680 aa19.98■□□□□ 0.79
HOXB3-206ENST00000471459 TOGARAM1Q9Y4F4 1720 aa19.98■□□□□ 0.79
HOXB3-206ENST00000471459 PTCD1O75127 700 aaKnown RBP19.97■□□□□ 0.79
HOXB3-206ENST00000471459 ITPK1Q13572 414 aa19.97■□□□□ 0.79
HOXB3-206ENST00000471459 MTHFSDQ2M296 383 aaKnown RBP19.97■□□□□ 0.79
HOXB3-206ENST00000471459 RTCBQ9Y3I0 505 aaKnown RBP19.97■□□□□ 0.79
HOXB3-206ENST00000471459 KDM6AO15550 1401 aaPredicted RBP19.96■□□□□ 0.79
HOXB3-206ENST00000471459 RNMTO43148 476 aaKnown RBP19.96■□□□□ 0.79
HOXB3-206ENST00000471459 PPP2R1AP30153 589 aa19.96■□□□□ 0.79
HOXB3-206ENST00000471459 MSL1Q68DK7 614 aa19.96■□□□□ 0.79
HOXB3-206ENST00000471459 GAS2L2Q8NHY3 880 aa19.96■□□□□ 0.79
HOXB3-206ENST00000471459 SLC52A2Q9HAB3 445 aa19.96■□□□□ 0.79
HOXB3-206ENST00000471459 TRAPPC3LQ5T215 181 aa19.95■□□□□ 0.78
HOXB3-206ENST00000471459 RC3H1Q5TC82 1133 aaKnown RBP19.95■□□□□ 0.78
HOXB3-206ENST00000471459 LGR6Q9HBX8 967 aa19.95■□□□□ 0.78
HOXB3-206ENST00000471459 MAP3K5Q99683 1374 aa19.95■□□□□ 0.78
HOXB3-206ENST00000471459 QSER1Q2KHR3 1735 aa19.94■□□□□ 0.78
HOXB3-206ENST00000471459 U2AF1L5P0DN76 240 aaPredicted RBP19.94■□□□□ 0.78
HOXB3-206ENST00000471459 U2AF1Q01081 240 aaKnown RBP eCLIP19.94■□□□□ 0.784e-6■■■■□ 20.8
HOXB3-206ENST00000471459 C5P01031 1676 aa19.94■□□□□ 0.78
HOXB3-206ENST00000471459 GNAT3A8MTJ3 354 aa19.92■□□□□ 0.78
HOXB3-206ENST00000471459 ADRA2BP18089 450 aa19.92■□□□□ 0.78
HOXB3-206ENST00000471459 YY1P25490 414 aa19.92■□□□□ 0.78
HOXB3-206ENST00000471459 GPR162Q16538 588 aa19.92■□□□□ 0.78
HOXB3-206ENST00000471459 C4BP0C0L5 1744 aa19.91■□□□□ 0.78
HOXB3-206ENST00000471459 NEFMP07197 916 aa19.91■□□□□ 0.78
HOXB3-206ENST00000471459 TEFQ10587 303 aa19.91■□□□□ 0.78
HOXB3-206ENST00000471459 RPS6KA4O75676 772 aa19.9■□□□□ 0.78
HOXB3-206ENST00000471459 FCHSD2O94868 740 aa19.9■□□□□ 0.78
HOXB3-206ENST00000471459 PRKAR2BP31323 418 aa19.9■□□□□ 0.78
HOXB3-206ENST00000471459 RFC4P35249 363 aa19.9■□□□□ 0.78
HOXB3-206ENST00000471459 SLC4A9Q96Q91 983 aa19.9■□□□□ 0.78
HOXB3-206ENST00000471459 CNTNAP4Q9C0A0 1308 aa19.9■□□□□ 0.78
HOXB3-206ENST00000471459 SMIM5Q71RC9 77 aa19.89■□□□□ 0.77
HOXB3-206ENST00000471459 PELP1Q8IZL8 1130 aaKnown RBP19.89■□□□□ 0.77
HOXB3-206ENST00000471459 TTC5Q8N0Z6 440 aa19.89■□□□□ 0.77
HOXB3-206ENST00000471459 NLGN1Q8N2Q7 840 aa19.89■□□□□ 0.77
HOXB3-206ENST00000471459 CD2APQ9Y5K6 639 aa19.89■□□□□ 0.77
HOXB3-206ENST00000471459 COL3A1P02461 1466 aaPredicted RBP19.88■□□□□ 0.77
HOXB3-206ENST00000471459 CRKLP46109 303 aaKnown RBP19.87■□□□□ 0.77
HOXB3-206ENST00000471459 AMIGO3Q86WK7 504 aa19.87■□□□□ 0.77
HOXB3-206ENST00000471459 RTF1Q92541 710 aaKnown RBP19.87■□□□□ 0.77
HOXB3-206ENST00000471459 ARHGEF1Q92888 912 aaKnown RBP19.87■□□□□ 0.77
HOXB3-206ENST00000471459 TAF1LQ8IZX4 1826 aa19.86■□□□□ 0.77
HOXB3-206ENST00000471459 SLC39A6Q13433 755 aa19.86■□□□□ 0.77
HOXB3-206ENST00000471459 RSPH6AQ9H0K4 717 aa19.86■□□□□ 0.77
HOXB3-206ENST00000471459 PHACTR3Q96KR7 559 aa19.85■□□□□ 0.77
HOXB3-206ENST00000471459 PNNQ9H307 717 aaKnown RBP19.85■□□□□ 0.77
HOXB3-206ENST00000471459 TUBGCP6Q96RT7 1819 aa19.84■□□□□ 0.77
HOXB3-206ENST00000471459 DDX10Q13206 875 aaKnown RBP19.84■□□□□ 0.77
HOXB3-206ENST00000471459 RALBP1Q15311 655 aa19.84■□□□□ 0.77
HOXB3-206ENST00000471459 VSIG10Q8N0Z9 540 aa19.84■□□□□ 0.77
HOXB3-206ENST00000471459 IL17REQ8NFR9 667 aa19.84■□□□□ 0.77
HOXB3-206ENST00000471459 GRIN3BO60391 1043 aa19.83■□□□□ 0.77
HOXB3-206ENST00000471459 STARD3NLO95772 234 aa19.83■□□□□ 0.77
HOXB3-206ENST00000471459 MMP10P09238 476 aa19.83■□□□□ 0.77
HOXB3-206ENST00000471459 DNAJC10Q8IXB1 793 aa19.83■□□□□ 0.77
HOXB3-206ENST00000471459 NLGN2Q8NFZ4 835 aa19.83■□□□□ 0.77
HOXB3-206ENST00000471459 CCDC87Q9NVE4 849 aa19.83■□□□□ 0.77
HOXB3-206ENST00000471459 TEX13AQ9BXU3 409 aaPredicted RBP19.82■□□□□ 0.76
HOXB3-206ENST00000471459 ZPR1O75312 459 aa19.81■□□□□ 0.76
HOXB3-206ENST00000471459 ZNF831Q5JPB2 1677 aa19.81■□□□□ 0.76
HOXB3-206ENST00000471459 HTATSF1O43719 755 aaKnown RBP19.8■□□□□ 0.76
HOXB3-206ENST00000471459 ZEB1P37275 1124 aaPredicted RBP19.8■□□□□ 0.76
HOXB3-206ENST00000471459 ZNF790Q6PG37 636 aa19.8■□□□□ 0.76
HOXB3-206ENST00000471459 PARP3Q9Y6F1 533 aa19.8■□□□□ 0.76
HOXB3-206ENST00000471459 SCN11AQ9UI33 1791 aa19.8■□□□□ 0.76
HOXB3-206ENST00000471459 BTBD11A6QL63 1104 aa19.79■□□□□ 0.76
HOXB3-206ENST00000471459 CYP19A1P11511 503 aaPredicted RBP19.79■□□□□ 0.76
HOXB3-206ENST00000471459 GYS1P13807 737 aa19.79■□□□□ 0.76
HOXB3-206ENST00000471459 INTS5Q6P9B9 1019 aaKnown RBP19.79■□□□□ 0.76
HOXB3-206ENST00000471459 NPM2Q86SE8 214 aaKnown RBP19.79■□□□□ 0.76
HOXB3-206ENST00000471459 UBR3Q6ZT12 1888 aa19.79■□□□□ 0.76
HOXB3-206ENST00000471459 COL24A1Q17RW2 1714 aa19.79■□□□□ 0.76
HOXB3-206ENST00000471459 MRC1P22897 1456 aa19.79■□□□□ 0.76
HOXB3-206ENST00000471459 FMNL2Q96PY5 1086 aa19.78■□□□□ 0.76
HOXB3-206ENST00000471459 ZNF496Q96IT1 587 aaPredicted RBP19.76■□□□□ 0.75
HOXB3-206ENST00000471459 A0A087WZG4 1122 aa19.75■□□□□ 0.75
HOXB3-206ENST00000471459 CANXP27824 592 aaKnown RBP19.75■□□□□ 0.75
HOXB3-206ENST00000471459 USP42Q9H9J4 1324 aaKnown RBP19.75■□□□□ 0.75
HOXB3-206ENST00000471459 MAPK8IP3Q9UPT6 1336 aa19.75■□□□□ 0.75
HOXB3-206ENST00000471459 CEMIPQ8WUJ3 1361 aa19.74■□□□□ 0.75
HOXB3-206ENST00000471459 TGFB2P61812 414 aa19.74■□□□□ 0.75
HOXB3-206ENST00000471459 MCM10Q7L590 875 aa19.74■□□□□ 0.75
HOXB3-206ENST00000471459 SRP68Q9UHB9 627 aaKnown RBP19.74■□□□□ 0.75
HOXB3-206ENST00000471459 SOS1Q07889 1333 aaPredicted RBP19.73■□□□□ 0.75
HOXB3-206ENST00000471459 HEG1Q9ULI3 1381 aa19.72■□□□□ 0.75
HOXB3-206ENST00000471459 TAF7Q15545 349 aaPredicted RBP19.72■□□□□ 0.75
HOXB3-206ENST00000471459 USPL1Q5W0Q7 1092 aa19.72■□□□□ 0.75
HOXB3-206ENST00000471459 NARFQ9UHQ1 456 aa19.72■□□□□ 0.75
HOXB3-206ENST00000471459 ZBTB1Q9Y2K1 713 aa19.72■□□□□ 0.75
HOXB3-206ENST00000471459 YBX3P16989 372 aaKnown RBP eCLIP19.71■□□□□ 0.75
HOXB3-206ENST00000471459 FKBP8Q14318 412 aa19.71■□□□□ 0.75
HOXB3-206ENST00000471459 PNISRQ8TF01 805 aaKnown RBP19.71■□□□□ 0.75
HOXB3-206ENST00000471459 MYBBP1AQ9BQG0 1328 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms