RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 ZNF827Q17R98 1081 aa12.82□□□□□ -0.36
CPSF4-211ENST00000471455 IER5LQ5T953 404 aa12.82□□□□□ -0.36
CPSF4-211ENST00000471455 LTV1Q96GA3 475 aaPredicted RBP12.82□□□□□ -0.36
CPSF4-211ENST00000471455 ANKRD36BQ8N2N9 1353 aa12.81□□□□□ -0.36
CPSF4-211ENST00000471455 SMG6Q86US8 1419 aaKnown RBP12.81□□□□□ -0.36
CPSF4-211ENST00000471455 SYTL4Q96C24 671 aaPredicted RBP12.81□□□□□ -0.36
CPSF4-211ENST00000471455 IRX5P78411 483 aaPredicted RBP12.8□□□□□ -0.36
CPSF4-211ENST00000471455 GPR162Q16538 588 aa12.8□□□□□ -0.36
CPSF4-211ENST00000471455 LRRC4BQ9NT99 713 aa12.8□□□□□ -0.36
CPSF4-211ENST00000471455 TFCP2L1Q9NZI6 479 aa12.8□□□□□ -0.36
CPSF4-211ENST00000471455 CGNL1Q0VF96 1302 aa12.8□□□□□ -0.36
CPSF4-211ENST00000471455 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.79□□□□□ -0.36
CPSF4-211ENST00000471455 HOXC9P31274 260 aa12.79□□□□□ -0.36
CPSF4-211ENST00000471455 ZCRB1Q8TBF4 217 aaKnown RBP12.79□□□□□ -0.36
CPSF4-211ENST00000471455 ZFP91Q96JP5 570 aaPredicted RBP12.79□□□□□ -0.36
CPSF4-211ENST00000471455 MAP3K19Q56UN5 1328 aa12.79□□□□□ -0.36
CPSF4-211ENST00000471455 DOT1LQ8TEK3 1739 aa12.79□□□□□ -0.36
CPSF4-211ENST00000471455 PNPLA7Q6ZV29 1317 aa12.78□□□□□ -0.36
CPSF4-211ENST00000471455 PRIM1P49642 420 aaKnown RBP12.77□□□□□ -0.37
CPSF4-211ENST00000471455 RAPGEF4Q8WZA2 1011 aa12.77□□□□□ -0.37
CPSF4-211ENST00000471455 CCNL1Q9UK58 526 aaPredicted RBP12.77□□□□□ -0.37
CPSF4-211ENST00000471455 USP47Q96K76 1375 aa12.77□□□□□ -0.37
CPSF4-211ENST00000471455 TESK2Q96S53 571 aa12.76□□□□□ -0.37
CPSF4-211ENST00000471455 LY75O60449 1722 aa12.76□□□□□ -0.37
CPSF4-211ENST00000471455 COL24A1Q17RW2 1714 aa12.76□□□□□ -0.37
CPSF4-211ENST00000471455 ST20-MTHFSA0A0A6YYL1 179 aa12.75□□□□□ -0.37
CPSF4-211ENST00000471455 MEGF6O75095 1541 aa12.75□□□□□ -0.37
CPSF4-211ENST00000471455 TMF1P82094 1093 aa12.75□□□□□ -0.37
CPSF4-211ENST00000471455 CDCA8Q53HL2 280 aa12.75□□□□□ -0.37
CPSF4-211ENST00000471455 NSD2O96028 1365 aa12.74□□□□□ -0.37
CPSF4-211ENST00000471455 KIF24Q5T7B8 1368 aa12.74□□□□□ -0.37
CPSF4-211ENST00000471455 PCDH11XQ9BZA7 1347 aa12.74□□□□□ -0.37
CPSF4-211ENST00000471455 PCDH11YQ9BZA8 1340 aa12.74□□□□□ -0.37
CPSF4-211ENST00000471455 SENP3-EIF4A1A0A087X0R7 540 aa12.74□□□□□ -0.37
CPSF4-211ENST00000471455 GRIN3BO60391 1043 aa12.74□□□□□ -0.37
CPSF4-211ENST00000471455 TATP17735 454 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-211ENST00000471455 C1QTNF8P60827 252 aa12.74□□□□□ -0.37
CPSF4-211ENST00000471455 SHANK3Q9BYB0 1731 aa12.74□□□□□ -0.37
CPSF4-211ENST00000471455 GIGYF1O75420 1035 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-211ENST00000471455 FLAD1Q8NFF5 587 aa12.73□□□□□ -0.37
CPSF4-211ENST00000471455 TUBGCP6Q96RT7 1819 aa12.73□□□□□ -0.37
CPSF4-211ENST00000471455 FLT4P35916 1363 aa12.72□□□□□ -0.37
CPSF4-211ENST00000471455 PDCD7Q8N8D1 485 aaKnown RBP12.72□□□□□ -0.37
CPSF4-211ENST00000471455 NSD3Q9BZ95 1437 aa12.71□□□□□ -0.37
CPSF4-211ENST00000471455 INSRP06213 1382 aa12.71□□□□□ -0.37
CPSF4-211ENST00000471455 RRS1Q15050 365 aaKnown RBP12.71□□□□□ -0.37
CPSF4-211ENST00000471455 NBPF6Q5VWK0 638 aa12.71□□□□□ -0.37
CPSF4-211ENST00000471455 NBPF4Q96M43 638 aa12.71□□□□□ -0.37
CPSF4-211ENST00000471455 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.38
CPSF4-211ENST00000471455 FYB1O15117 783 aa12.7□□□□□ -0.38
CPSF4-211ENST00000471455 KCNQ4P56696 695 aa12.7□□□□□ -0.38
CPSF4-211ENST00000471455 SMARCC1Q92922 1105 aaPredicted RBP12.7□□□□□ -0.38
CPSF4-211ENST00000471455 OTUD5Q96G74 571 aa12.7□□□□□ -0.38
CPSF4-211ENST00000471455 GGNBP2Q9H3C7 697 aa12.7□□□□□ -0.38
CPSF4-211ENST00000471455 UTRNP46939 3433 aa12.7□□□□□ -0.38
CPSF4-211ENST00000471455 C5P01031 1676 aa12.7□□□□□ -0.38
CPSF4-211ENST00000471455 PALLDQ8WX93 1383 aa12.69□□□□□ -0.38
CPSF4-211ENST00000471455 KIF20BQ96Q89 1820 aa12.69□□□□□ -0.38
CPSF4-211ENST00000471455 USHBP1Q8N6Y0 703 aa12.69□□□□□ -0.38
CPSF4-211ENST00000471455 NLGN2Q8NFZ4 835 aa12.69□□□□□ -0.38
CPSF4-211ENST00000471455 FBLN1P23142 703 aa12.68□□□□□ -0.38
CPSF4-211ENST00000471455 COL23A1Q86Y22 540 aaPredicted RBP12.68□□□□□ -0.38
CPSF4-211ENST00000471455 CD2APQ9Y5K6 639 aa12.68□□□□□ -0.38
CPSF4-211ENST00000471455 SEC24BO95487 1268 aa12.67□□□□□ -0.38
CPSF4-211ENST00000471455 EFCAB3Q8N7B9 438 aa12.67□□□□□ -0.38
CPSF4-211ENST00000471455 AK7Q96M32 723 aa12.67□□□□□ -0.38
CPSF4-211ENST00000471455 PLCG2P16885 1265 aa12.66□□□□□ -0.38
CPSF4-211ENST00000471455 HSP90AB2PQ58FF8 381 aa12.66□□□□□ -0.38
CPSF4-211ENST00000471455 MSL1Q68DK7 614 aa12.66□□□□□ -0.38
CPSF4-211ENST00000471455 MPRIPQ6WCQ1 1025 aa12.66□□□□□ -0.38
CPSF4-211ENST00000471455 OCEL1Q9H607 264 aa12.66□□□□□ -0.38
CPSF4-211ENST00000471455 MKRN3Q13064 507 aaKnown RBP12.65□□□□□ -0.38
CPSF4-211ENST00000471455 SPG7Q9UQ90 795 aa12.65□□□□□ -0.38
CPSF4-211ENST00000471455 PKD1L3Q7Z443 1732 aa12.65□□□□□ -0.38
CPSF4-211ENST00000471455 YBX3P16989 372 aaKnown RBP eCLIP12.64□□□□□ -0.39
CPSF4-211ENST00000471455 C4BP0C0L5 1744 aa12.64□□□□□ -0.39
CPSF4-211ENST00000471455 TAF1LQ8IZX4 1826 aa12.64□□□□□ -0.39
CPSF4-211ENST00000471455 CYP27B1O15528 508 aa12.63□□□□□ -0.39
CPSF4-211ENST00000471455 GOLGA2Q08379 1002 aa12.63□□□□□ -0.39
CPSF4-211ENST00000471455 NCAPD2Q15021 1401 aa12.62□□□□□ -0.39
CPSF4-211ENST00000471455 ATP10DQ9P241 1426 aa12.62□□□□□ -0.39
CPSF4-211ENST00000471455 PLEKHG2Q9H7P9 1386 aa12.62□□□□□ -0.39
CPSF4-211ENST00000471455 SSFA2P28290 1259 aa12.62□□□□□ -0.39
CPSF4-211ENST00000471455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.62□□□□□ -0.39
CPSF4-211ENST00000471455 ITGB4P16144 1822 aa12.61□□□□□ -0.39
CPSF4-211ENST00000471455 STK25O00506 426 aa12.61□□□□□ -0.39
CPSF4-211ENST00000471455 PPM1GO15355 546 aaPredicted RBP12.61□□□□□ -0.39
CPSF4-211ENST00000471455 NKX1-1Q15270 411 aaPredicted RBP12.61□□□□□ -0.39
CPSF4-211ENST00000471455 GPBP1L1Q9HC44 474 aaPredicted RBP12.61□□□□□ -0.39
CPSF4-211ENST00000471455 RTN4Q9NQC3 1192 aaKnown RBP12.61□□□□□ -0.39
CPSF4-211ENST00000471455 TMOD3Q9NYL9 352 aa12.61□□□□□ -0.39
CPSF4-211ENST00000471455 EMILIN1Q9Y6C2 1016 aa12.61□□□□□ -0.39
CPSF4-211ENST00000471455 ANKRD26Q9UPS8 1709 aa12.61□□□□□ -0.39
CPSF4-211ENST00000471455 TOGARAM1Q9Y4F4 1720 aa12.61□□□□□ -0.39
CPSF4-211ENST00000471455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.6□□□□□ -0.39
CPSF4-211ENST00000471455 LOC102724428A0A0B4J2F2 783 aa12.6□□□□□ -0.39
CPSF4-211ENST00000471455 PHF14O94880 888 aa12.6□□□□□ -0.39
CPSF4-211ENST00000471455 SIK1P57059 783 aa12.6□□□□□ -0.39
CPSF4-211ENST00000471455 DPY19L2Q6NUT2 758 aa12.6□□□□□ -0.39
CPSF4-211ENST00000471455 PIGBQ92521 554 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms