RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 BTAF1O14981 1849 aa11.95□□□□□ -0.5
PTPRE-207ENST00000471218 FAM208AQ9UK61 1670 aaKnown RBP11.94□□□□□ -0.5
PTPRE-207ENST00000471218 IGSF1Q8N6C5 1336 aa11.94□□□□□ -0.5
PTPRE-207ENST00000471218 GOLGB1Q14789 3259 aaKnown RBP11.94□□□□□ -0.5
PTPRE-207ENST00000471218 MSH5O43196 834 aa11.94□□□□□ -0.5
PTPRE-207ENST00000471218 CT47B1P0C2W7 299 aaPredicted RBP11.94□□□□□ -0.5
PTPRE-207ENST00000471218 EIF4A2Q14240 407 aaKnown RBP11.94□□□□□ -0.5
PTPRE-207ENST00000471218 WWC1Q8IX03 1113 aa11.94□□□□□ -0.5
PTPRE-207ENST00000471218 CD2APQ9Y5K6 639 aa11.94□□□□□ -0.5
PTPRE-207ENST00000471218 PAPPAQ13219 1627 aa11.93□□□□□ -0.5
PTPRE-207ENST00000471218 LTN1O94822 1766 aa11.93□□□□□ -0.5
PTPRE-207ENST00000471218 PPM1GO15355 546 aaPredicted RBP11.93□□□□□ -0.5
PTPRE-207ENST00000471218 TATP17735 454 aaPredicted RBP11.93□□□□□ -0.5
PTPRE-207ENST00000471218 SLFN5Q08AF3 891 aa11.93□□□□□ -0.5
PTPRE-207ENST00000471218 SMARCC1Q92922 1105 aaPredicted RBP11.93□□□□□ -0.5
PTPRE-207ENST00000471218 GTF3C3Q9Y5Q9 886 aa11.93□□□□□ -0.5
PTPRE-207ENST00000471218 NCAPD2Q15021 1401 aa11.93□□□□□ -0.5
PTPRE-207ENST00000471218 QSER1Q2KHR3 1735 aa11.92□□□□□ -0.5
PTPRE-207ENST00000471218 TMPOP42166 694 aaKnown RBP11.92□□□□□ -0.5
PTPRE-207ENST00000471218 NFE2L2Q16236 605 aa11.92□□□□□ -0.5
PTPRE-207ENST00000471218 CCDC146Q8IYE0 955 aa11.92□□□□□ -0.5
PTPRE-207ENST00000471218 MYH16Q9H6N6 1097 aa11.92□□□□□ -0.5
PTPRE-207ENST00000471218 PCDH11XQ9BZA7 1347 aa11.91□□□□□ -0.5
PTPRE-207ENST00000471218 PCDH11YQ9BZA8 1340 aa11.91□□□□□ -0.5
PTPRE-207ENST00000471218 DUSP27Q5VZP5 1158 aa11.91□□□□□ -0.5
PTPRE-207ENST00000471218 PRKAR2BP31323 418 aa11.9□□□□□ -0.5
PTPRE-207ENST00000471218 HTATSF1O43719 755 aaKnown RBP11.89□□□□□ -0.51
PTPRE-207ENST00000471218 HSP90AB2PQ58FF8 381 aa11.89□□□□□ -0.51
PTPRE-207ENST00000471218 COL23A1Q86Y22 540 aaPredicted RBP11.89□□□□□ -0.51
PTPRE-207ENST00000471218 ZNF428Q96B54 188 aa11.89□□□□□ -0.51
PTPRE-207ENST00000471218 RCAN3Q9UKA8 241 aa11.89□□□□□ -0.51
PTPRE-207ENST00000471218 NBPF6Q5VWK0 638 aa11.88□□□□□ -0.51
PTPRE-207ENST00000471218 GAS2L2Q8NHY3 880 aa11.88□□□□□ -0.51
PTPRE-207ENST00000471218 NBPF4Q96M43 638 aa11.88□□□□□ -0.51
PTPRE-207ENST00000471218 FBLN1P23142 703 aa11.87□□□□□ -0.51
PTPRE-207ENST00000471218 NLGN2Q8NFZ4 835 aa11.87□□□□□ -0.51
PTPRE-207ENST00000471218 AK7Q96M32 723 aa11.87□□□□□ -0.51
PTPRE-207ENST00000471218 GPBP1L1Q9HC44 474 aaPredicted RBP11.87□□□□□ -0.51
PTPRE-207ENST00000471218 SPG7Q9UQ90 795 aa11.87□□□□□ -0.51
PTPRE-207ENST00000471218 COL24A1Q17RW2 1714 aa11.86□□□□□ -0.51
PTPRE-207ENST00000471218 RIPK4P57078 832 aa11.86□□□□□ -0.51
PTPRE-207ENST00000471218 SULT6B1Q6IMI4 303 aa11.86□□□□□ -0.51
PTPRE-207ENST00000471218 MPRIPQ6WCQ1 1025 aa11.86□□□□□ -0.51
PTPRE-207ENST00000471218 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.86□□□□□ -0.51
PTPRE-207ENST00000471218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.86□□□□□ -0.51
PTPRE-207ENST00000471218 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
PTPRE-207ENST00000471218 SUPT16HQ9Y5B9 1047 aaKnown RBP11.86□□□□□ -0.51
PTPRE-207ENST00000471218 SSFA2P28290 1259 aa11.85□□□□□ -0.51
PTPRE-207ENST00000471218 KCNQ4P56696 695 aa11.85□□□□□ -0.51
PTPRE-207ENST00000471218 IFFO2Q5TF58 517 aa11.85□□□□□ -0.51
PTPRE-207ENST00000471218 CDCA7LQ96GN5 454 aa11.85□□□□□ -0.51
PTPRE-207ENST00000471218 EYA1Q99502 592 aa11.85□□□□□ -0.51
PTPRE-207ENST00000471218 IFT57Q9NWB7 429 aa11.85□□□□□ -0.51
PTPRE-207ENST00000471218 BABAM1Q9NWV8 329 aa11.85□□□□□ -0.51
PTPRE-207ENST00000471218 LY75O60449 1722 aa11.85□□□□□ -0.51
PTPRE-207ENST00000471218 CEP350Q5VT06 3117 aa11.84□□□□□ -0.51
PTPRE-207ENST00000471218 PALLDQ8WX93 1383 aa11.84□□□□□ -0.51
PTPRE-207ENST00000471218 YBX3P16989 372 aaKnown RBP eCLIP11.84□□□□□ -0.51
PTPRE-207ENST00000471218 GNAI1P63096 354 aa11.84□□□□□ -0.51
PTPRE-207ENST00000471218 SALL2Q9Y467 1007 aaPredicted RBP11.84□□□□□ -0.51
PTPRE-207ENST00000471218 MEGF6O75095 1541 aa11.83□□□□□ -0.52
PTPRE-207ENST00000471218 HMOX1P09601 288 aa11.83□□□□□ -0.52
PTPRE-207ENST00000471218 RRP1P56182 461 aaKnown RBP11.83□□□□□ -0.52
PTPRE-207ENST00000471218 NKX1-1Q15270 411 aaPredicted RBP11.83□□□□□ -0.52
PTPRE-207ENST00000471218 AMOTQ4VCS5 1084 aa11.83□□□□□ -0.52
PTPRE-207ENST00000471218 SOS1Q07889 1333 aaPredicted RBP11.83□□□□□ -0.52
PTPRE-207ENST00000471218 PHACTR3Q96KR7 559 aa11.82□□□□□ -0.52
PTPRE-207ENST00000471218 DOT1LQ8TEK3 1739 aa11.81□□□□□ -0.52
PTPRE-207ENST00000471218 ZNF853P0CG23 659 aa11.81□□□□□ -0.52
PTPRE-207ENST00000471218 AAMPQ13685 434 aa11.81□□□□□ -0.52
PTPRE-207ENST00000471218 MSL1Q68DK7 614 aa11.81□□□□□ -0.52
PTPRE-207ENST00000471218 AEBP1Q8IUX7 1158 aa11.81□□□□□ -0.52
PTPRE-207ENST00000471218 USHBP1Q8N6Y0 703 aa11.81□□□□□ -0.52
PTPRE-207ENST00000471218 CFAP44Q96MT7 982 aa11.81□□□□□ -0.52
PTPRE-207ENST00000471218 TMOD3Q9NYL9 352 aa11.81□□□□□ -0.52
PTPRE-207ENST00000471218 RRP7AQ9Y3A4 280 aaKnown RBP11.81□□□□□ -0.52
PTPRE-207ENST00000471218 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.8□□□□□ -0.52
PTPRE-207ENST00000471218 LOC102724428A0A0B4J2F2 783 aa11.8□□□□□ -0.52
PTPRE-207ENST00000471218 CYP27B1O15528 508 aa11.8□□□□□ -0.52
PTPRE-207ENST00000471218 HSP90AB1P08238 724 aaKnown RBP11.8□□□□□ -0.52
PTPRE-207ENST00000471218 HSPA6P17066 643 aa11.8□□□□□ -0.52
PTPRE-207ENST00000471218 SIK1P57059 783 aa11.8□□□□□ -0.52
PTPRE-207ENST00000471218 TGFB2P61812 414 aa11.8□□□□□ -0.52
PTPRE-207ENST00000471218 FKBP8Q14318 412 aa11.8□□□□□ -0.52
PTPRE-207ENST00000471218 NEUROD2Q15784 382 aa11.8□□□□□ -0.52
PTPRE-207ENST00000471218 IFNL2Q8IZJ0 200 aa11.8□□□□□ -0.52
PTPRE-207ENST00000471218 NLGN1Q8N2Q7 840 aa11.8□□□□□ -0.52
PTPRE-207ENST00000471218 FANCIQ9NVI1 1328 aa11.8□□□□□ -0.52
PTPRE-207ENST00000471218 ATP10DQ9P241 1426 aa11.79□□□□□ -0.52
PTPRE-207ENST00000471218 BRPF1P55201 1214 aaPredicted RBP11.79□□□□□ -0.52
PTPRE-207ENST00000471218 PIGBQ92521 554 aa11.79□□□□□ -0.52
PTPRE-207ENST00000471218 RTF1Q92541 710 aaKnown RBP11.79□□□□□ -0.52
PTPRE-207ENST00000471218 CHMP4AQ9BY43 222 aa11.79□□□□□ -0.52
PTPRE-207ENST00000471218 SPINK5Q9NQ38 1064 aaPredicted RBP11.79□□□□□ -0.52
PTPRE-207ENST00000471218 MS4A1P11836 297 aa11.78□□□□□ -0.52
PTPRE-207ENST00000471218 ADRA2BP18089 450 aa11.78□□□□□ -0.52
PTPRE-207ENST00000471218 ALDH1L2Q3SY69 923 aa11.78□□□□□ -0.52
PTPRE-207ENST00000471218 PLEKHO1Q53GL0 409 aaPredicted RBP11.78□□□□□ -0.52
PTPRE-207ENST00000471218 GNAT3A8MTJ3 354 aa11.77□□□□□ -0.53
PTPRE-207ENST00000471218 PHF14O94880 888 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms