RNA–Protein interactions for RNA: ENST00000471158.1

RFT1-204, Transcript of RFT1 homolog, humanhuman

TSL 3

Gene RFT1, Length 924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-204ENST00000471158 SLIT2O94813 1529 aa15.38■□□□□ 0.05
RFT1-204ENST00000471158 CYP27B1O15528 508 aa15.38■□□□□ 0.05
RFT1-204ENST00000471158 NKX1-1Q15270 411 aaPredicted RBP15.38■□□□□ 0.05
RFT1-204ENST00000471158 C20orf194Q5TEA3 1177 aa15.38■□□□□ 0.05
RFT1-204ENST00000471158 ATF7IPQ6VMQ6 1270 aa15.38■□□□□ 0.05
RFT1-204ENST00000471158 FTSJ3Q8IY81 847 aaKnown RBP15.38■□□□□ 0.05
RFT1-204ENST00000471158 MRPL50Q8N5N7 158 aaKnown RBP15.38■□□□□ 0.05
RFT1-204ENST00000471158 SLC52A2Q9HAB3 445 aa15.38■□□□□ 0.05
RFT1-204ENST00000471158 USP35Q9P2H5 1018 aa15.38■□□□□ 0.05
RFT1-204ENST00000471158 NRAPQ86VF7 1730 aa15.37■□□□□ 0.05
RFT1-204ENST00000471158 ERVV-2B6SEH9 535 aa15.37■□□□□ 0.05
RFT1-204ENST00000471158 CCDC30Q5VVM6 783 aa15.37■□□□□ 0.05
RFT1-204ENST00000471158 DZIP1LQ8IYY4 767 aaKnown RBP15.37■□□□□ 0.05
RFT1-204ENST00000471158 CCDC136Q96JN2 1154 aa15.37■□□□□ 0.05
RFT1-204ENST00000471158 NOB1Q9ULX3 412 aaKnown RBP15.37■□□□□ 0.05
RFT1-204ENST00000471158 KDM3BQ7LBC6 1761 aa15.36■□□□□ 0.05
RFT1-204ENST00000471158 DISP2A7MBM2 1401 aa15.36■□□□□ 0.05
RFT1-204ENST00000471158 KDM6AO15550 1401 aaPredicted RBP15.36■□□□□ 0.05
RFT1-204ENST00000471158 HSPA1LP34931 641 aa15.36■□□□□ 0.05
RFT1-204ENST00000471158 UNC5CLQ8IV45 518 aa15.36■□□□□ 0.05
RFT1-204ENST00000471158 NGLY1Q96IV0 654 aa15.36■□□□□ 0.05
RFT1-204ENST00000471158 STK31Q9BXU1 1019 aa15.36■□□□□ 0.05
RFT1-204ENST00000471158 API5Q9BZZ5 524 aaKnown RBP15.36■□□□□ 0.05
RFT1-204ENST00000471158 SPATA31A1Q5TZJ5 1347 aa15.36■□□□□ 0.05
RFT1-204ENST00000471158 SIPA1L3O60292 1781 aaPredicted RBP15.36■□□□□ 0.05
RFT1-204ENST00000471158 MRC1P22897 1456 aa15.35■□□□□ 0.05
RFT1-204ENST00000471158 EXOC5O00471 708 aa15.35■□□□□ 0.05
RFT1-204ENST00000471158 CABP4P57796 275 aa15.35■□□□□ 0.05
RFT1-204ENST00000471158 EIF4A1P60842 406 aaKnown RBP15.35■□□□□ 0.05
RFT1-204ENST00000471158 CHMP4BQ9H444 224 aaKnown RBP15.35■□□□□ 0.05
RFT1-204ENST00000471158 SPATA31A5Q5VU36 1347 aa15.35■□□□□ 0.05
RFT1-204ENST00000471158 SPATA31A7Q8IWB4 1347 aa15.35■□□□□ 0.05
RFT1-204ENST00000471158 TRIM27P14373 513 aa15.34■□□□□ 0.05
RFT1-204ENST00000471158 KRT24Q2M2I5 525 aa15.34■□□□□ 0.05
RFT1-204ENST00000471158 BARGINQ6ZT62 677 aa15.34■□□□□ 0.05
RFT1-204ENST00000471158 FNBP4Q8N3X1 1017 aaPredicted RBP15.34■□□□□ 0.05
RFT1-204ENST00000471158 DDX54Q8TDD1 881 aaKnown RBP15.34■□□□□ 0.05
RFT1-204ENST00000471158 PTPRCP08575 1304 aa15.34■□□□□ 0.05
RFT1-204ENST00000471158 MEX3CQ5U5Q3 659 aaKnown RBP15.33■□□□□ 0.04
RFT1-204ENST00000471158 NFATC2IPQ8NCF5 419 aa15.33■□□□□ 0.04
RFT1-204ENST00000471158 PANK1Q8TE04 598 aa15.33■□□□□ 0.04
RFT1-204ENST00000471158 C8orf37Q96NL8 207 aa15.33■□□□□ 0.04
RFT1-204ENST00000471158 CACNA1FO60840 1977 aa15.33■□□□□ 0.04
RFT1-204ENST00000471158 WNK3Q9BYP7 1800 aa15.32■□□□□ 0.04
RFT1-204ENST00000471158 MAPK8IP2Q13387 824 aaPredicted RBP15.32■□□□□ 0.04
RFT1-204ENST00000471158 MVPQ14764 893 aaKnown RBP15.32■□□□□ 0.04
RFT1-204ENST00000471158 VPS72Q15906 364 aa15.32■□□□□ 0.04
RFT1-204ENST00000471158 ZNF790Q6PG37 636 aa15.32■□□□□ 0.04
RFT1-204ENST00000471158 TTC5Q8N0Z6 440 aa15.32■□□□□ 0.04
RFT1-204ENST00000471158 DDX19BQ9UMR2 479 aa15.32■□□□□ 0.04
RFT1-204ENST00000471158 CCDC9Q9Y3X0 531 aaKnown RBP15.32■□□□□ 0.04
RFT1-204ENST00000471158 SLC4A2P04920 1241 aa15.31■□□□□ 0.04
RFT1-204ENST00000471158 HDGFL1Q5TGJ6 251 aa15.31■□□□□ 0.04
RFT1-204ENST00000471158 B4GALNT3Q6L9W6 998 aa15.31■□□□□ 0.04
RFT1-204ENST00000471158 COG6Q9Y2V7 657 aa15.31■□□□□ 0.04
RFT1-204ENST00000471158 SHANK3Q9BYB0 1731 aa15.31■□□□□ 0.04
RFT1-204ENST00000471158 CLUAP1Q96AJ1 413 aa15.3■□□□□ 0.04
RFT1-204ENST00000471158 HEG1Q9ULI3 1381 aa15.3■□□□□ 0.04
RFT1-204ENST00000471158 BCL9LQ86UU0 1499 aa15.29■□□□□ 0.04
RFT1-204ENST00000471158 TNS2Q63HR2 1409 aa15.29■□□□□ 0.04
RFT1-204ENST00000471158 TCERG1O14776 1098 aaKnown RBP15.29■□□□□ 0.04
RFT1-204ENST00000471158 KCNQ3O43525 872 aa15.29■□□□□ 0.04
RFT1-204ENST00000471158 GIGYF1O75420 1035 aaPredicted RBP15.29■□□□□ 0.04
RFT1-204ENST00000471158 RLBP1P12271 317 aa15.29■□□□□ 0.04
RFT1-204ENST00000471158 DDB1Q16531 1140 aa15.29■□□□□ 0.04
RFT1-204ENST00000471158 FMNL2Q96PY5 1086 aa15.29■□□□□ 0.04
RFT1-204ENST00000471158 USP21Q9UK80 565 aa15.29■□□□□ 0.04
RFT1-204ENST00000471158 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.29■□□□□ 0.04
RFT1-204ENST00000471158 ABCC4O15439 1325 aa15.28■□□□□ 0.04
RFT1-204ENST00000471158 ITPRIPQ8IWB1 547 aa15.28■□□□□ 0.04
RFT1-204ENST00000471158 LRP6O75581 1613 aa15.28■□□□□ 0.04
RFT1-204ENST00000471158 TMOD3Q9NYL9 352 aa15.27■□□□□ 0.04
RFT1-204ENST00000471158 SNRPA1P09661 255 aaKnown RBP15.26■□□□□ 0.03
RFT1-204ENST00000471158 EIF2S2P20042 333 aaKnown RBP15.26■□□□□ 0.03
RFT1-204ENST00000471158 SLC39A6Q13433 755 aa15.26■□□□□ 0.03
RFT1-204ENST00000471158 TMEM57Q8N5G2 664 aa15.26■□□□□ 0.03
RFT1-204ENST00000471158 DBF4Q9UBU7 674 aaPredicted RBP15.26■□□□□ 0.03
RFT1-204ENST00000471158 TNNQ9UQP3 1299 aa15.25■□□□□ 0.03
RFT1-204ENST00000471158 FLIIQ13045 1269 aa15.24■□□□□ 0.03
RFT1-204ENST00000471158 INTS3Q68E01 1043 aaKnown RBP15.24■□□□□ 0.03
RFT1-204ENST00000471158 HYPKQ9NX55 129 aa15.24■□□□□ 0.03
RFT1-204ENST00000471158 CCT4P50991 539 aaKnown RBP15.23■□□□□ 0.03
RFT1-204ENST00000471158 FKBP5Q13451 457 aaPredicted RBP15.23■□□□□ 0.03
RFT1-204ENST00000471158 CENPQQ7L2Z9 268 aaPredicted RBP15.23■□□□□ 0.03
RFT1-204ENST00000471158 NECTIN2Q92692 538 aa15.23■□□□□ 0.03
RFT1-204ENST00000471158 ZNF496Q96IT1 587 aaPredicted RBP15.23■□□□□ 0.03
RFT1-204ENST00000471158 CACNB1Q02641 598 aaPredicted RBP15.22■□□□□ 0.03
RFT1-204ENST00000471158 TEX13AQ9BXU3 409 aaPredicted RBP15.22■□□□□ 0.03
RFT1-204ENST00000471158 CHPF2Q9P2E5 772 aa15.22■□□□□ 0.03
RFT1-204ENST00000471158 TRPC5Q9UL62 973 aaPredicted RBP15.22■□□□□ 0.03
RFT1-204ENST00000471158 PAPPAQ13219 1627 aa15.21■□□□□ 0.03
RFT1-204ENST00000471158 AFF2P51816 1311 aa15.21■□□□□ 0.03
RFT1-204ENST00000471158 ERBB4Q15303 1308 aa15.21■□□□□ 0.03
RFT1-204ENST00000471158 FAM98CQ17RN3 349 aaKnown RBP15.21■□□□□ 0.03
RFT1-204ENST00000471158 G2E3Q7L622 706 aa15.21■□□□□ 0.03
RFT1-204ENST00000471158 RWDD1Q9H446 243 aaPredicted RBP15.21■□□□□ 0.03
RFT1-204ENST00000471158 DDX21Q9NR30 783 aaKnown RBP eCLIP15.21■□□□□ 0.03
RFT1-204ENST00000471158 TOGARAM1Q9Y4F4 1720 aa15.2■□□□□ 0.02
RFT1-204ENST00000471158 RGS12O14924 1447 aa15.2■□□□□ 0.02
RFT1-204ENST00000471158 ZBTB7BO15156 539 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms