RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 NFATC2IPQ8NCF5 419 aa21.05■□□□□ 0.96
HDAC6-218ENST00000470942 C4BP0C0L5 1744 aa21.04■□□□□ 0.96
HDAC6-218ENST00000470942 PTGER2P43116 358 aa21.04■□□□□ 0.96
HDAC6-218ENST00000470942 SLC16A10Q8TF71 515 aa21.04■□□□□ 0.96
HDAC6-218ENST00000470942 RBM42Q9BTD8 480 aaKnown RBP21.04■□□□□ 0.96
HDAC6-218ENST00000470942 AK7Q96M32 723 aa21.03■□□□□ 0.96
HDAC6-218ENST00000470942 LGR6Q9HBX8 967 aa21.02■□□□□ 0.96
HDAC6-218ENST00000470942 RNMTO43148 476 aaKnown RBP21.01■□□□□ 0.95
HDAC6-218ENST00000470942 U2AF1L5P0DN76 240 aaPredicted RBP21.01■□□□□ 0.95
HDAC6-218ENST00000470942 U2AF1Q01081 240 aaKnown RBP eCLIP21.01■□□□□ 0.95
HDAC6-218ENST00000470942 COL23A1Q86Y22 540 aaPredicted RBP21.01■□□□□ 0.95
HDAC6-218ENST00000470942 LINC00116Q8NCU8 138 aa21.01■□□□□ 0.95
HDAC6-218ENST00000470942 ITPK1Q13572 414 aa21■□□□□ 0.95
HDAC6-218ENST00000470942 FLAD1Q8NFF5 587 aa21■□□□□ 0.95
HDAC6-218ENST00000470942 PRKAR2BP31323 418 aa20.99■□□□□ 0.95
HDAC6-218ENST00000470942 GAS2L2Q8NHY3 880 aa20.99■□□□□ 0.95
HDAC6-218ENST00000470942 SGIP1Q9BQI5 828 aa20.99■□□□□ 0.95
HDAC6-218ENST00000470942 UBR3Q6ZT12 1888 aa20.98■□□□□ 0.95
HDAC6-218ENST00000470942 POLD1P28340 1107 aa20.98■□□□□ 0.95
HDAC6-218ENST00000470942 RSPH6AQ9H0K4 717 aa20.98■□□□□ 0.95
HDAC6-218ENST00000470942 SLC52A2Q9HAB3 445 aa20.98■□□□□ 0.95
HDAC6-218ENST00000470942 PTCD1O75127 700 aaKnown RBP20.97■□□□□ 0.95
HDAC6-218ENST00000470942 PHF14O94880 888 aa20.97■□□□□ 0.95
HDAC6-218ENST00000470942 SLC4A9Q96Q91 983 aa20.97■□□□□ 0.95
HDAC6-218ENST00000470942 ARXQ96QS3 562 aa20.97■□□□□ 0.95
HDAC6-218ENST00000470942 GNAT3A8MTJ3 354 aa20.96■□□□□ 0.95
HDAC6-218ENST00000470942 RALBP1Q15311 655 aa20.96■□□□□ 0.95
HDAC6-218ENST00000470942 PHACTR3Q96KR7 559 aa20.96■□□□□ 0.95
HDAC6-218ENST00000470942 ZNF831Q5JPB2 1677 aa20.96■□□□□ 0.95
HDAC6-218ENST00000470942 GNPATO15228 680 aa20.95■□□□□ 0.94
HDAC6-218ENST00000470942 SMIM5Q71RC9 77 aa20.95■□□□□ 0.94
HDAC6-218ENST00000470942 MAP3K5Q99683 1374 aa20.95■□□□□ 0.94
HDAC6-218ENST00000470942 COL24A1Q17RW2 1714 aa20.95■□□□□ 0.94
HDAC6-218ENST00000470942 ADAMTS7Q9UKP4 1686 aa20.94■□□□□ 0.94
HDAC6-218ENST00000470942 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.94■□□□□ 0.94
HDAC6-218ENST00000470942 FCHSD2O94868 740 aa20.94■□□□□ 0.94
HDAC6-218ENST00000470942 MSL1Q68DK7 614 aa20.94■□□□□ 0.94
HDAC6-218ENST00000470942 AMIGO3Q86WK7 504 aa20.94■□□□□ 0.94
HDAC6-218ENST00000470942 FHDC1Q9C0D6 1143 aaPredicted RBP20.94■□□□□ 0.94
HDAC6-218ENST00000470942 MRC1P22897 1456 aa20.93■□□□□ 0.94
HDAC6-218ENST00000470942 COL5A3P25940 1745 aaPredicted RBP20.92■□□□□ 0.94
HDAC6-218ENST00000470942 SSFA2P28290 1259 aa20.92■□□□□ 0.94
HDAC6-218ENST00000470942 TEFQ10587 303 aa20.92■□□□□ 0.94
HDAC6-218ENST00000470942 SLC39A6Q13433 755 aa20.92■□□□□ 0.94
HDAC6-218ENST00000470942 KLHL34Q8N239 644 aa20.92■□□□□ 0.94
HDAC6-218ENST00000470942 DCAF8L1A6NGE4 600 aa20.91■□□□□ 0.94
HDAC6-218ENST00000470942 IL17REQ8NFR9 667 aa20.91■□□□□ 0.94
HDAC6-218ENST00000470942 SYT17Q9BSW7 474 aa20.91■□□□□ 0.94
HDAC6-218ENST00000470942 NEFMP07197 916 aa20.9■□□□□ 0.94
HDAC6-218ENST00000470942 RC3H1Q5TC82 1133 aaKnown RBP20.9■□□□□ 0.94
HDAC6-218ENST00000470942 RTCBQ9Y3I0 505 aaKnown RBP20.9■□□□□ 0.94
HDAC6-218ENST00000470942 TJP1Q07157 1748 aa20.89■□□□□ 0.93
HDAC6-218ENST00000470942 MYH14Q7Z406 1995 aaKnown RBP20.88■□□□□ 0.93
HDAC6-218ENST00000470942 CNTNAP4Q9C0A0 1308 aa20.88■□□□□ 0.93
HDAC6-218ENST00000470942 TRAPPC3LQ5T215 181 aa20.88■□□□□ 0.93
HDAC6-218ENST00000470942 TTC5Q8N0Z6 440 aa20.87■□□□□ 0.93
HDAC6-218ENST00000470942 RTF1Q92541 710 aaKnown RBP20.87■□□□□ 0.93
HDAC6-218ENST00000470942 SIPA1L3O60292 1781 aaPredicted RBP20.87■□□□□ 0.93
HDAC6-218ENST00000470942 MYBBP1AQ9BQG0 1328 aaKnown RBP20.86■□□□□ 0.93
HDAC6-218ENST00000470942 RPS6KA4O75676 772 aa20.86■□□□□ 0.93
HDAC6-218ENST00000470942 CRKLP46109 303 aaKnown RBP20.86■□□□□ 0.93
HDAC6-218ENST00000470942 DNAJC10Q8IXB1 793 aa20.86■□□□□ 0.93
HDAC6-218ENST00000470942 CICQ96RK0 1608 aaPredicted RBP20.85■□□□□ 0.93
HDAC6-218ENST00000470942 KCPQ6ZWJ8 1503 aa20.84■□□□□ 0.93
HDAC6-218ENST00000470942 MCM10Q7L590 875 aa20.84■□□□□ 0.93
HDAC6-218ENST00000470942 PNNQ9H307 717 aaKnown RBP20.84■□□□□ 0.93
HDAC6-218ENST00000470942 UBR2Q8IWV8 1755 aa20.84■□□□□ 0.93
HDAC6-218ENST00000470942 CEMIPQ8WUJ3 1361 aa20.84■□□□□ 0.93
HDAC6-218ENST00000470942 DLG5Q8TDM6 1919 aa20.83■□□□□ 0.93
HDAC6-218ENST00000470942 ADRA2BP18089 450 aa20.83■□□□□ 0.93
HDAC6-218ENST00000470942 RFC4P35249 363 aa20.83■□□□□ 0.93
HDAC6-218ENST00000470942 ARHGEF1Q92888 912 aaKnown RBP20.83■□□□□ 0.93
HDAC6-218ENST00000470942 ZNF790Q6PG37 636 aa20.82■□□□□ 0.92
HDAC6-218ENST00000470942 MAPK8IP3Q9UPT6 1336 aa20.81■□□□□ 0.92
HDAC6-218ENST00000470942 BTBD11A6QL63 1104 aa20.81■□□□□ 0.92
HDAC6-218ENST00000470942 HTATSF1O43719 755 aaKnown RBP20.81■□□□□ 0.92
HDAC6-218ENST00000470942 DCTN1Q14203 1278 aa20.81■□□□□ 0.92
HDAC6-218ENST00000470942 INTS5Q6P9B9 1019 aaKnown RBP20.81■□□□□ 0.92
HDAC6-218ENST00000470942 VSIG10Q8N0Z9 540 aa20.81■□□□□ 0.92
HDAC6-218ENST00000470942 PLEKHF1Q96S99 279 aa20.81■□□□□ 0.92
HDAC6-218ENST00000470942 CCDC87Q9NVE4 849 aa20.81■□□□□ 0.92
HDAC6-218ENST00000470942 CYP19A1P11511 503 aaPredicted RBP20.8■□□□□ 0.92
HDAC6-218ENST00000470942 C4AP0C0L4 1744 aa20.79■□□□□ 0.92
HDAC6-218ENST00000470942 ZNF496Q96IT1 587 aaPredicted RBP20.79■□□□□ 0.92
HDAC6-218ENST00000470942 PRKRIP1Q9H875 184 aaPredicted RBP20.79■□□□□ 0.92
HDAC6-218ENST00000470942 NFE2L2Q16236 605 aa20.78■□□□□ 0.92
HDAC6-218ENST00000470942 NLGN1Q8N2Q7 840 aa20.78■□□□□ 0.92
HDAC6-218ENST00000470942 NLGN2Q8NFZ4 835 aa20.78■□□□□ 0.92
HDAC6-218ENST00000470942 FMNL2Q96PY5 1086 aa20.78■□□□□ 0.92
HDAC6-218ENST00000470942 HEG1Q9ULI3 1381 aa20.77■□□□□ 0.92
HDAC6-218ENST00000470942 ZNF316A6NFI3 1004 aaPredicted RBP20.77■□□□□ 0.92
HDAC6-218ENST00000470942 KCNQ3O43525 872 aa20.77■□□□□ 0.92
HDAC6-218ENST00000470942 STARD3NLO95772 234 aa20.77■□□□□ 0.92
HDAC6-218ENST00000470942 MMP10P09238 476 aa20.76■□□□□ 0.91
HDAC6-218ENST00000470942 GYS1P13807 737 aa20.76■□□□□ 0.91
HDAC6-218ENST00000470942 PELP1Q8IZL8 1130 aaKnown RBP20.76■□□□□ 0.91
HDAC6-218ENST00000470942 TEX13AQ9BXU3 409 aaPredicted RBP20.76■□□□□ 0.91
HDAC6-218ENST00000470942 SRP68Q9UHB9 627 aaKnown RBP20.76■□□□□ 0.91
HDAC6-218ENST00000470942 CANXP27824 592 aaKnown RBP20.75■□□□□ 0.91
HDAC6-218ENST00000470942 WDR43Q15061 677 aaKnown RBP eCLIP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms