RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 ERVV-2B6SEH9 535 aa11.46□□□□□ -0.57
LMCD1-207ENST00000470776 EIF4A1P60842 406 aaKnown RBP11.46□□□□□ -0.57
LMCD1-207ENST00000470776 SSH1Q8WYL5 1049 aa11.46□□□□□ -0.57
LMCD1-207ENST00000470776 C8orf37Q96NL8 207 aa11.46□□□□□ -0.57
LMCD1-207ENST00000470776 SLC52A2Q9HAB3 445 aa11.46□□□□□ -0.57
LMCD1-207ENST00000470776 MIS18AQ9NYP9 233 aa11.46□□□□□ -0.57
LMCD1-207ENST00000470776 HEG1Q9ULI3 1381 aa11.45□□□□□ -0.58
LMCD1-207ENST00000470776 HOXB7P09629 217 aa11.45□□□□□ -0.58
LMCD1-207ENST00000470776 PDE3AQ14432 1141 aa11.45□□□□□ -0.58
LMCD1-207ENST00000470776 USP35Q9P2H5 1018 aa11.45□□□□□ -0.58
LMCD1-207ENST00000470776 AFF2P51816 1311 aa11.44□□□□□ -0.58
LMCD1-207ENST00000470776 BTBD11A6QL63 1104 aa11.44□□□□□ -0.58
LMCD1-207ENST00000470776 EXOC5O00471 708 aa11.44□□□□□ -0.58
LMCD1-207ENST00000470776 MRPL50Q8N5N7 158 aaKnown RBP11.44□□□□□ -0.58
LMCD1-207ENST00000470776 TSHZ2Q9NRE2 1034 aa11.44□□□□□ -0.58
LMCD1-207ENST00000470776 TNS2Q63HR2 1409 aa11.43□□□□□ -0.58
LMCD1-207ENST00000470776 PLIN1O60240 522 aa11.43□□□□□ -0.58
LMCD1-207ENST00000470776 KRT24Q2M2I5 525 aa11.43□□□□□ -0.58
LMCD1-207ENST00000470776 ARHGAP45Q92619 1136 aa11.43□□□□□ -0.58
LMCD1-207ENST00000470776 CHMP4AQ9BY43 222 aa11.43□□□□□ -0.58
LMCD1-207ENST00000470776 SMC4Q9NTJ3 1288 aa11.43□□□□□ -0.58
LMCD1-207ENST00000470776 USP21Q9UK80 565 aa11.43□□□□□ -0.58
LMCD1-207ENST00000470776 SCN11AQ9UI33 1791 aa11.42□□□□□ -0.58
LMCD1-207ENST00000470776 ELL2O00472 640 aaPredicted RBP11.42□□□□□ -0.58
LMCD1-207ENST00000470776 KCNQ3O43525 872 aa11.42□□□□□ -0.58
LMCD1-207ENST00000470776 ONECUT3O60422 494 aaPredicted RBP11.42□□□□□ -0.58
LMCD1-207ENST00000470776 CABP4P57796 275 aa11.42□□□□□ -0.58
LMCD1-207ENST00000470776 NFATC2IPQ8NCF5 419 aa11.42□□□□□ -0.58
LMCD1-207ENST00000470776 DDX54Q8TDD1 881 aaKnown RBP11.42□□□□□ -0.58
LMCD1-207ENST00000470776 SHANK3Q9BYB0 1731 aa11.42□□□□□ -0.58
LMCD1-207ENST00000470776 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.42□□□□□ -0.58
LMCD1-207ENST00000470776 SIPA1L3O60292 1781 aaPredicted RBP11.41□□□□□ -0.58
LMCD1-207ENST00000470776 KIF16BQ96L93 1317 aa11.41□□□□□ -0.58
LMCD1-207ENST00000470776 IPO8O15397 1037 aaKnown RBP11.41□□□□□ -0.58
LMCD1-207ENST00000470776 MS4A1P11836 297 aa11.41□□□□□ -0.58
LMCD1-207ENST00000470776 IRX6P78412 446 aaPredicted RBP11.41□□□□□ -0.58
LMCD1-207ENST00000470776 DDB1Q16531 1140 aa11.41□□□□□ -0.58
LMCD1-207ENST00000470776 C20orf194Q5TEA3 1177 aa11.41□□□□□ -0.58
LMCD1-207ENST00000470776 ZKSCAN2Q63HK3 967 aa11.41□□□□□ -0.58
LMCD1-207ENST00000470776 ZNF772Q68DY9 489 aaPredicted RBP11.41□□□□□ -0.58
LMCD1-207ENST00000470776 ZNF790Q6PG37 636 aa11.41□□□□□ -0.58
LMCD1-207ENST00000470776 ATRNO75882 1429 aa11.41□□□□□ -0.58
LMCD1-207ENST00000470776 KDM3BQ7LBC6 1761 aa11.41□□□□□ -0.58
LMCD1-207ENST00000470776 GIGYF1O75420 1035 aaPredicted RBP11.4□□□□□ -0.58
LMCD1-207ENST00000470776 ATF7IPQ6VMQ6 1270 aa11.4□□□□□ -0.58
LMCD1-207ENST00000470776 BCL2L13Q9BXK5 485 aa11.4□□□□□ -0.58
LMCD1-207ENST00000470776 PPP4R2Q9NY27 417 aa11.4□□□□□ -0.58
LMCD1-207ENST00000470776 NOB1Q9ULX3 412 aaKnown RBP11.4□□□□□ -0.58
LMCD1-207ENST00000470776 CCDC30Q5VVM6 783 aa11.39□□□□□ -0.59
LMCD1-207ENST00000470776 PIAS4Q8N2W9 510 aaPredicted RBP11.39□□□□□ -0.59
LMCD1-207ENST00000470776 EXOC6Q8TAG9 804 aa11.39□□□□□ -0.59
LMCD1-207ENST00000470776 GJD4Q96KN9 370 aaPredicted RBP11.39□□□□□ -0.59
LMCD1-207ENST00000470776 TRPC5Q9UL62 973 aaPredicted RBP11.39□□□□□ -0.59
LMCD1-207ENST00000470776 CCDC9Q9Y3X0 531 aaKnown RBP11.39□□□□□ -0.59
LMCD1-207ENST00000470776 WNK3Q9BYP7 1800 aa11.39□□□□□ -0.59
LMCD1-207ENST00000470776 TRIM27P14373 513 aa11.38□□□□□ -0.59
LMCD1-207ENST00000470776 AAMPQ13685 434 aa11.38□□□□□ -0.59
LMCD1-207ENST00000470776 MARCH10Q8NA82 808 aaPredicted RBP11.38□□□□□ -0.59
LMCD1-207ENST00000470776 FRAT1Q92837 279 aaPredicted RBP11.38□□□□□ -0.59
LMCD1-207ENST00000470776 CRBNQ96SW2 442 aa11.38□□□□□ -0.59
LMCD1-207ENST00000470776 QTRT2Q9H974 415 aaKnown RBP11.38□□□□□ -0.59
LMCD1-207ENST00000470776 PTPRCP08575 1304 aa11.37□□□□□ -0.59
LMCD1-207ENST00000470776 RLBP1P12271 317 aa11.37□□□□□ -0.59
LMCD1-207ENST00000470776 SLC39A6Q13433 755 aa11.37□□□□□ -0.59
LMCD1-207ENST00000470776 FAM98CQ17RN3 349 aaKnown RBP11.37□□□□□ -0.59
LMCD1-207ENST00000470776 DZIP1LQ8IYY4 767 aaKnown RBP11.37□□□□□ -0.59
LMCD1-207ENST00000470776 ZNF496Q96IT1 587 aaPredicted RBP11.37□□□□□ -0.59
LMCD1-207ENST00000470776 FMNL2Q96PY5 1086 aa11.37□□□□□ -0.59
LMCD1-207ENST00000470776 API5Q9BZZ5 524 aaKnown RBP11.37□□□□□ -0.59
LMCD1-207ENST00000470776 BCL9O00512 1426 aa11.36□□□□□ -0.59
LMCD1-207ENST00000470776 SLC4A2P04920 1241 aa11.36□□□□□ -0.59
LMCD1-207ENST00000470776 SNRPA1P09661 255 aaKnown RBP11.36□□□□□ -0.59
LMCD1-207ENST00000470776 CANXP27824 592 aaKnown RBP11.36□□□□□ -0.59
LMCD1-207ENST00000470776 RXRBP28702 533 aa11.36□□□□□ -0.59
LMCD1-207ENST00000470776 HDGFL1Q5TGJ6 251 aa11.36□□□□□ -0.59
LMCD1-207ENST00000470776 STK31Q9BXU1 1019 aa11.36□□□□□ -0.59
LMCD1-207ENST00000470776 TMOD3Q9NYL9 352 aa11.36□□□□□ -0.59
LMCD1-207ENST00000470776 TNNQ9UQP3 1299 aa11.36□□□□□ -0.59
LMCD1-207ENST00000470776 TTC5Q8N0Z6 440 aa11.35□□□□□ -0.59
LMCD1-207ENST00000470776 VSIG10Q8N0Z9 540 aa11.35□□□□□ -0.59
LMCD1-207ENST00000470776 PANK1Q8TE04 598 aa11.35□□□□□ -0.59
LMCD1-207ENST00000470776 PIGBQ92521 554 aa11.35□□□□□ -0.59
LMCD1-207ENST00000470776 GLI3P10071 1580 aa11.35□□□□□ -0.59
LMCD1-207ENST00000470776 THSD7AQ9UPZ6 1657 aa11.35□□□□□ -0.59
LMCD1-207ENST00000470776 ABCC4O15439 1325 aa11.35□□□□□ -0.59
LMCD1-207ENST00000470776 TCERG1O14776 1098 aaKnown RBP11.34□□□□□ -0.59
LMCD1-207ENST00000470776 MVPQ14764 893 aaKnown RBP11.34□□□□□ -0.59
LMCD1-207ENST00000470776 ATG3Q9NT62 314 aa11.34□□□□□ -0.59
LMCD1-207ENST00000470776 DBF4Q9UBU7 674 aaPredicted RBP11.34□□□□□ -0.59
LMCD1-207ENST00000470776 VIRMAQ69YN4 1812 aaKnown RBP11.34□□□□□ -0.59
LMCD1-207ENST00000470776 TOGARAM1Q9Y4F4 1720 aa11.34□□□□□ -0.59
LMCD1-207ENST00000470776 RGS12O14924 1447 aa11.34□□□□□ -0.59
LMCD1-207ENST00000470776 RBM6P78332 1123 aaKnown RBP11.33□□□□□ -0.6
LMCD1-207ENST00000470776 INTS3Q68E01 1043 aaKnown RBP11.33□□□□□ -0.6
LMCD1-207ENST00000470776 G2E3Q7L622 706 aa11.33□□□□□ -0.6
LMCD1-207ENST00000470776 DDX21Q9NR30 783 aaKnown RBP eCLIP11.33□□□□□ -0.6
LMCD1-207ENST00000470776 COG6Q9Y2V7 657 aa11.33□□□□□ -0.6
LMCD1-207ENST00000470776 PAPPAQ13219 1627 aa11.33□□□□□ -0.6
LMCD1-207ENST00000470776 KCPQ6ZWJ8 1503 aa11.33□□□□□ -0.6
LMCD1-207ENST00000470776 ERBB4Q15303 1308 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms