RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 CCDC30Q5VVM6 783 aa16.74■□□□□ 0.27
HDAC7-219ENST00000470668 ZSCAN31Q96LW9 406 aaPredicted RBP16.74■□□□□ 0.27
HDAC7-219ENST00000470668 SIL1Q9H173 461 aa16.74■□□□□ 0.27
HDAC7-219ENST00000470668 CFAP45Q9UL16 551 aa16.74■□□□□ 0.27
HDAC7-219ENST00000470668 KIF20AO95235 890 aa16.74■□□□□ 0.27
HDAC7-219ENST00000470668 ALDH1L2Q3SY69 923 aa16.74■□□□□ 0.27
HDAC7-219ENST00000470668 ZSWIM4Q9H7M6 989 aa16.74■□□□□ 0.27
HDAC7-219ENST00000470668 LIMCH1Q9UPQ0 1083 aa16.74■□□□□ 0.27
HDAC7-219ENST00000470668 SPG7Q9UQ90 795 aa16.74■□□□□ 0.27
HDAC7-219ENST00000470668 KIF2AO00139 706 aaPredicted RBP16.74■□□□□ 0.27
HDAC7-219ENST00000470668 FCHSD2O94868 740 aa16.73■□□□□ 0.27
HDAC7-219ENST00000470668 IDI1Q13907 227 aa16.73■□□□□ 0.27
HDAC7-219ENST00000470668 SCAND2PQ9GZW5 306 aaPredicted RBP16.73■□□□□ 0.27
HDAC7-219ENST00000470668 NFE2L2Q16236 605 aa16.73■□□□□ 0.27
HDAC7-219ENST00000470668 MYRIPQ8NFW9 859 aa16.73■□□□□ 0.27
HDAC7-219ENST00000470668 SRCIN1Q9C0H9 1055 aa16.73■□□□□ 0.27
HDAC7-219ENST00000470668 KIF14Q15058 1648 aa16.72■□□□□ 0.27
HDAC7-219ENST00000470668 RIOK3O14730 519 aaKnown RBP16.72■□□□□ 0.27
HDAC7-219ENST00000470668 PPFIA3O75145 1194 aa16.72■□□□□ 0.27
HDAC7-219ENST00000470668 PAXBP1Q9Y5B6 917 aa16.72■□□□□ 0.27
HDAC7-219ENST00000470668 RAB11FIP3O75154 756 aa16.72■□□□□ 0.27
HDAC7-219ENST00000470668 GJB2P29033 226 aa16.72■□□□□ 0.27
HDAC7-219ENST00000470668 ANKRD1Q15327 319 aa16.72■□□□□ 0.27
HDAC7-219ENST00000470668 SAFBQ15424 915 aaKnown RBP eCLIP16.72■□□□□ 0.27
HDAC7-219ENST00000470668 CENPHQ9H3R5 247 aa16.72■□□□□ 0.27
HDAC7-219ENST00000470668 HDGFL1Q5TGJ6 251 aa16.71■□□□□ 0.27
HDAC7-219ENST00000470668 SKILP12757 684 aa16.71■□□□□ 0.27
HDAC7-219ENST00000470668 RBM25P49756 843 aaKnown RBP16.71■□□□□ 0.27
HDAC7-219ENST00000470668 GUCY1B3Q02153 619 aa16.71■□□□□ 0.27
HDAC7-219ENST00000470668 SNW1Q13573 536 aaKnown RBP16.71■□□□□ 0.27
HDAC7-219ENST00000470668 BIN1O00499 593 aa16.71■□□□□ 0.27
HDAC7-219ENST00000470668 CHAMP1Q96JM3 812 aa16.71■□□□□ 0.27
HDAC7-219ENST00000470668 TERF1P54274 439 aa16.7■□□□□ 0.26
HDAC7-219ENST00000470668 TESK2Q96S53 571 aa16.7■□□□□ 0.26
HDAC7-219ENST00000470668 TRIM34Q9BYJ4 488 aa16.7■□□□□ 0.26
HDAC7-219ENST00000470668 DTNBO60941 627 aa16.7■□□□□ 0.26
HDAC7-219ENST00000470668 KIAA0754O94854 1291 aa16.7■□□□□ 0.26
HDAC7-219ENST00000470668 ZNF445P59923 1031 aa16.7■□□□□ 0.26
HDAC7-219ENST00000470668 MCM10Q7L590 875 aa16.7■□□□□ 0.26
HDAC7-219ENST00000470668 DNM1Q05193 864 aaKnown RBP16.69■□□□□ 0.26
HDAC7-219ENST00000470668 ANO6Q4KMQ2 910 aa16.69■□□□□ 0.26
HDAC7-219ENST00000470668 FAM200AQ8TCP9 573 aa16.69■□□□□ 0.26
HDAC7-219ENST00000470668 PSME1Q06323 249 aa16.69■□□□□ 0.26
HDAC7-219ENST00000470668 C1orf141Q5JVX7 400 aa16.69■□□□□ 0.26
HDAC7-219ENST00000470668 TMC6Q7Z403 805 aa16.69■□□□□ 0.26
HDAC7-219ENST00000470668 PPFIBP1Q86W92 1011 aa16.69■□□□□ 0.26
HDAC7-219ENST00000470668 ANO10Q9NW15 660 aa16.69■□□□□ 0.26
HDAC7-219ENST00000470668 TMEM63CQ9P1W3 806 aa16.69■□□□□ 0.26
HDAC7-219ENST00000470668 NECAB1Q8N987 351 aa16.69■□□□□ 0.26
HDAC7-219ENST00000470668 ERBB4Q15303 1308 aa16.69■□□□□ 0.26
HDAC7-219ENST00000470668 ZSCAN22P10073 491 aaPredicted RBP16.68■□□□□ 0.26
HDAC7-219ENST00000470668 SLC52A1Q9NWF4 448 aa16.68■□□□□ 0.26
HDAC7-219ENST00000470668 OGFRQ9NZT2 677 aa16.68■□□□□ 0.26
HDAC7-219ENST00000470668 DDX58O95786 925 aaKnown RBP16.68■□□□□ 0.26
HDAC7-219ENST00000470668 RIC3Q7Z5B4 369 aa16.68■□□□□ 0.26
HDAC7-219ENST00000470668 AACSQ86V21 672 aa16.68■□□□□ 0.26
HDAC7-219ENST00000470668 GTF3C6Q969F1 213 aa16.68■□□□□ 0.26
HDAC7-219ENST00000470668 FILIP1LQ4L180 1135 aa16.68■□□□□ 0.26
HDAC7-219ENST00000470668 TCEANC2Q96MN5 208 aa16.68■□□□□ 0.26
HDAC7-219ENST00000470668 PPP1R9BQ96SB3 815 aa16.68■□□□□ 0.26
HDAC7-219ENST00000470668 DACT1Q9NYF0 836 aa16.68■□□□□ 0.26
HDAC7-219ENST00000470668 FEZ1Q99689 392 aa16.67■□□□□ 0.26
HDAC7-219ENST00000470668 LMBRD1Q9NUN5 540 aa16.67■□□□□ 0.26
HDAC7-219ENST00000470668 DDX19AQ9NUU7 478 aaKnown RBP16.67■□□□□ 0.26
HDAC7-219ENST00000470668 ISM2Q6H9L7 571 aa16.67■□□□□ 0.26
HDAC7-219ENST00000470668 PIBF1Q8WXW3 757 aa16.67■□□□□ 0.26
HDAC7-219ENST00000470668 BCL2L12Q9HB09 334 aa16.67■□□□□ 0.26
HDAC7-219ENST00000470668 DNAJC25Q9H1X3 360 aa16.67■□□□□ 0.26
HDAC7-219ENST00000470668 ANTXR1Q9H6X2 564 aa16.67■□□□□ 0.26
HDAC7-219ENST00000470668 EMILIN1Q9Y6C2 1016 aa16.67■□□□□ 0.26
HDAC7-219ENST00000470668 ARHGAP29Q52LW3 1261 aa16.67■□□□□ 0.26
HDAC7-219ENST00000470668 ZBTB40Q9NUA8 1239 aa16.67■□□□□ 0.26
HDAC7-219ENST00000470668 RAPGEF6Q8TEU7 1601 aa16.66■□□□□ 0.26
HDAC7-219ENST00000470668 JAKMIP3Q5VZ66 844 aa16.66■□□□□ 0.26
HDAC7-219ENST00000470668 C10orf67Q8IYJ2 551 aa16.66■□□□□ 0.26
HDAC7-219ENST00000470668 RBM33Q96EV2 1170 aaKnown RBP16.66■□□□□ 0.26
HDAC7-219ENST00000470668 HIP1O00291 1037 aa16.66■□□□□ 0.26
HDAC7-219ENST00000470668 LRRFIP1Q32MZ4 808 aaKnown RBP16.66■□□□□ 0.26
HDAC7-219ENST00000470668 LUZP1Q86V48 1076 aa16.66■□□□□ 0.26
HDAC7-219ENST00000470668 DNAI1Q9UI46 699 aa16.66■□□□□ 0.26
HDAC7-219ENST00000470668 KIF4BQ2VIQ3 1234 aa16.66■□□□□ 0.26
HDAC7-219ENST00000470668 NME9Q86XW9 330 aa16.66■□□□□ 0.26
HDAC7-219ENST00000470668 SMARCE1Q969G3 411 aa16.66■□□□□ 0.26
HDAC7-219ENST00000470668 NOS1P29475 1434 aa16.66■□□□□ 0.26
HDAC7-219ENST00000470668 CTTNBP2Q8WZ74 1663 aa16.66■□□□□ 0.26
HDAC7-219ENST00000470668 MARCH6O60337 910 aa16.65■□□□□ 0.26
HDAC7-219ENST00000470668 CFAP43Q8NDM7 1665 aa16.65■□□□□ 0.26
HDAC7-219ENST00000470668 ADGRL1O94910 1474 aa16.65■□□□□ 0.26
HDAC7-219ENST00000470668 CDR1P51861 262 aa16.65■□□□□ 0.26
HDAC7-219ENST00000470668 PKP1Q13835 747 aa16.65■□□□□ 0.26
HDAC7-219ENST00000470668 CBFA2T2O43439 604 aa16.65■□□□□ 0.26
HDAC7-219ENST00000470668 ABTB2Q8N961 1025 aa16.65■□□□□ 0.26
HDAC7-219ENST00000470668 PLCD4Q9BRC7 762 aa16.65■□□□□ 0.26
HDAC7-219ENST00000470668 LRRFIP2Q9Y608 721 aaKnown RBP16.65■□□□□ 0.26
HDAC7-219ENST00000470668 NEMFO60524 1076 aa16.65■□□□□ 0.26
HDAC7-219ENST00000470668 USP8P40818 1118 aa16.65■□□□□ 0.26
HDAC7-219ENST00000470668 MEIS3Q99687 375 aa16.65■□□□□ 0.26
HDAC7-219ENST00000470668 SLU7O95391 586 aaKnown RBP16.64■□□□□ 0.25
HDAC7-219ENST00000470668 MCM6Q14566 821 aa16.64■□□□□ 0.25
HDAC7-219ENST00000470668 ZNF500O60304 480 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms