RNA–Protein interactions for RNA: ENST00000470643.5

FLOT1-208, Transcript of flotillin 1, human

TSL 3

Gene FLOT1, Length 852 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FLOT1-208	ENST00000470643	GRIN3B	O60391	1043 aa		29.25	■■■□□ 2.27
FLOT1-208	ENST00000470643	ZNF530	Q6P9A1	599 aa	Predicted RBP	29.25	■■■□□ 2.27
FLOT1-208	ENST00000470643	GNPAT	O15228	680 aa		29.23	■■■□□ 2.27
FLOT1-208	ENST00000470643	C1orf141	Q5JVX7	400 aa		29.23	■■■□□ 2.27
FLOT1-208	ENST00000470643	ITPK1	Q13572	414 aa		29.22	■■■□□ 2.27
FLOT1-208	ENST00000470643	CABP4	P57796	275 aa		29.21	■■■□□ 2.27
FLOT1-208	ENST00000470643	SULT6B1	Q6IMI4	303 aa		29.2	■■■□□ 2.26
FLOT1-208	ENST00000470643	AMIGO3	Q86WK7	504 aa		29.2	■■■□□ 2.26
FLOT1-208	ENST00000470643	RBM42	Q9BTD8	480 aa	Known RBP	29.2	■■■□□ 2.26
FLOT1-208	ENST00000470643	MTHFS	P49914	203 aa		29.19	■■■□□ 2.26
FLOT1-208	ENST00000470643	AEBP1	Q8IUX7	1158 aa		29.19	■■■□□ 2.26
FLOT1-208	ENST00000470643	KIF7	Q2M1P5	1343 aa		29.19	■■■□□ 2.26
FLOT1-208	ENST00000470643	SMIM5	Q71RC9	77 aa		29.18	■■■□□ 2.26
FLOT1-208	ENST00000470643	UBR3	Q6ZT12	1888 aa		29.18	■■■□□ 2.26
FLOT1-208	ENST00000470643	AMER1	Q5JTC6	1135 aa	Predicted RBP	29.17	■■■□□ 2.26
FLOT1-208	ENST00000470643	YBX3	P16989	372 aa	Known RBP eCLIP	29.16	■■■□□ 2.26
FLOT1-208	ENST00000470643	RTCB	Q9Y3I0	505 aa	Known RBP	29.16	■■■□□ 2.26
FLOT1-208	ENST00000470643	IL13	P35225	146 aa		29.15	■■■□□ 2.26
FLOT1-208	ENST00000470643	TRAPPC3L	Q5T215	181 aa		29.14	■■■□□ 2.26
FLOT1-208	ENST00000470643	KDR	P35968	1356 aa		29.13	■■■□□ 2.25
FLOT1-208	ENST00000470643	KDM6A	O15550	1401 aa	Predicted RBP	29.12	■■■□□ 2.25
FLOT1-208	ENST00000470643	RC3H1	Q5TC82	1133 aa	Known RBP	29.12	■■■□□ 2.25
FLOT1-208	ENST00000470643	GOLGB1	Q14789	3259 aa	Known RBP	29.12	■■■□□ 2.25
FLOT1-208	ENST00000470643	ADRA2B	P18089	450 aa		29.1	■■■□□ 2.25
FLOT1-208	ENST00000470643	NFATC2IP	Q8NCF5	419 aa		29.1	■■■□□ 2.25
FLOT1-208	ENST00000470643	SLC4A9	Q96Q91	983 aa		29.09	■■■□□ 2.25
FLOT1-208	ENST00000470643	NLGN1	Q8N2Q7	840 aa		29.08	■■■□□ 2.25
FLOT1-208	ENST00000470643	CNTNAP4	Q9C0A0	1308 aa		29.08	■■■□□ 2.25
FLOT1-208	ENST00000470643	PTCD1	O75127	700 aa	Known RBP	29.07	■■■□□ 2.24
FLOT1-208	ENST00000470643	AKAP4	Q5JQC9	854 aa		29.07	■■■□□ 2.24
FLOT1-208	ENST00000470643	CC2D1B	Q5T0F9	858 aa	Known RBP	29.07	■■■□□ 2.24
FLOT1-208	ENST00000470643	MMP10	P09238	476 aa		29.06	■■■□□ 2.24
FLOT1-208	ENST00000470643	RFC4	P35249	363 aa		29.06	■■■□□ 2.24
FLOT1-208	ENST00000470643	ZNF831	Q5JPB2	1677 aa		29.05	■■■□□ 2.24
FLOT1-208	ENST00000470643	PER1	O15534	1290 aa	Predicted RBP	29.05	■■■□□ 2.24
FLOT1-208	ENST00000470643	RPS6KA4	O75676	772 aa		29.05	■■■□□ 2.24
FLOT1-208	ENST00000470643	GIGYF1	O75420	1035 aa	Predicted RBP	29.04	■■■□□ 2.24
FLOT1-208	ENST00000470643	ARHGEF1	Q92888	912 aa	Known RBP	29.04	■■■□□ 2.24
FLOT1-208	ENST00000470643	DIAPH1	O60610	1272 aa	Known RBP	29.03	■■■□□ 2.24
FLOT1-208	ENST00000470643	C1QTNF8	P60827	252 aa		29.03	■■■□□ 2.24
FLOT1-208	ENST00000470643	HMOX1	P09601	288 aa		29.02	■■■□□ 2.24
FLOT1-208	ENST00000470643	SLC52A2	Q9HAB3	445 aa		28.99	■■■□□ 2.23
FLOT1-208	ENST00000470643	WWC3	Q9ULE0	1092 aa		28.99	■■■□□ 2.23
FLOT1-208	ENST00000470643	CRKL	P46109	303 aa	Known RBP	28.98	■■■□□ 2.23
FLOT1-208	ENST00000470643	GYS1	P13807	737 aa		28.97	■■■□□ 2.23
FLOT1-208	ENST00000470643	CCDC87	Q9NVE4	849 aa		28.97	■■■□□ 2.23
FLOT1-208	ENST00000470643	PARP3	Q9Y6F1	533 aa		28.97	■■■□□ 2.23
FLOT1-208	ENST00000470643	COL5A3	P25940	1745 aa	Predicted RBP	28.97	■■■□□ 2.23
FLOT1-208	ENST00000470643	TGFB2	P61812	414 aa		28.96	■■■□□ 2.23
FLOT1-208	ENST00000470643	CNGB1	Q14028	1251 aa	Predicted RBP	28.96	■■■□□ 2.23
FLOT1-208	ENST00000470643	RNMT	O43148	476 aa	Known RBP	28.95	■■■□□ 2.22
FLOT1-208	ENST00000470643	LGR6	Q9HBX8	967 aa		28.95	■■■□□ 2.22
FLOT1-208	ENST00000470643	NPC1L1	Q9UHC9	1359 aa		28.95	■■■□□ 2.22
FLOT1-208	ENST00000470643	SENP3-EIF4A1	A0A087X0R7	540 aa		28.94	■■■□□ 2.22
FLOT1-208	ENST00000470643	SCN11A	Q9UI33	1791 aa		28.93	■■■□□ 2.22
FLOT1-208	ENST00000470643	MTHFSD	Q2M296	383 aa	Known RBP	28.93	■■■□□ 2.22
FLOT1-208	ENST00000470643	CIC	Q96RK0	1608 aa	Predicted RBP	28.92	■■■□□ 2.22
FLOT1-208	ENST00000470643	ATP10D	Q9P241	1426 aa		28.92	■■■□□ 2.22
FLOT1-208	ENST00000470643	U2SURP	O15042	1029 aa	Known RBP	28.91	■■■□□ 2.22
FLOT1-208	ENST00000470643	GPBP1L1	Q9HC44	474 aa	Predicted RBP	28.9	■■■□□ 2.22
FLOT1-208	ENST00000470643	MYH14	Q7Z406	1995 aa	Known RBP	28.9	■■■□□ 2.22
FLOT1-208	ENST00000470643	DNAJC10	Q8IXB1	793 aa		28.89	■■■□□ 2.22
FLOT1-208	ENST00000470643	USP42	Q9H9J4	1324 aa	Known RBP	28.89	■■■□□ 2.21
FLOT1-208	ENST00000470643	C10orf71	Q711Q0	1435 aa		28.88	■■■□□ 2.21
FLOT1-208	ENST00000470643		A0A0G2JLW4	131 aa		28.88	■■■□□ 2.21
FLOT1-208	ENST00000470643	SLC39A6	Q13433	755 aa		28.88	■■■□□ 2.21
FLOT1-208	ENST00000470643	INTS5	Q6P9B9	1019 aa	Known RBP	28.88	■■■□□ 2.21
FLOT1-208	ENST00000470643	BCS1L	Q9Y276	419 aa		28.88	■■■□□ 2.21
FLOT1-208	ENST00000470643	PXDNL	A1KZ92	1463 aa		28.88	■■■□□ 2.21
FLOT1-208	ENST00000470643	ZPR1	O75312	459 aa		28.87	■■■□□ 2.21
FLOT1-208	ENST00000470643	SRP68	Q9UHB9	627 aa	Known RBP	28.87	■■■□□ 2.21
FLOT1-208	ENST00000470643	MRC1	P22897	1456 aa		28.86	■■■□□ 2.21
FLOT1-208	ENST00000470643	C4A	P0C0L4	1744 aa		28.86	■■■□□ 2.21
FLOT1-208	ENST00000470643	GAS2L2	Q8NHY3	880 aa		28.85	■■■□□ 2.21
FLOT1-208	ENST00000470643	CFAP53	Q96M91	514 aa		28.85	■■■□□ 2.21
FLOT1-208	ENST00000470643	TJP1	Q07157	1748 aa		28.84	■■■□□ 2.21
FLOT1-208	ENST00000470643	DPEP1	P16444	411 aa		28.84	■■■□□ 2.21
FLOT1-208	ENST00000470643	FKBP8	Q14318	412 aa		28.84	■■■□□ 2.21
FLOT1-208	ENST00000470643	TTC5	Q8N0Z6	440 aa		28.84	■■■□□ 2.21
FLOT1-208	ENST00000470643	KIF13B	Q9NQT8	1826 aa		28.84	■■■□□ 2.21
FLOT1-208	ENST00000470643	CYP19A1	P11511	503 aa	Predicted RBP	28.83	■■■□□ 2.21
FLOT1-208	ENST00000470643	VSIG10	Q8N0Z9	540 aa		28.83	■■■□□ 2.21
FLOT1-208	ENST00000470643	ZNF526	Q8TF50	670 aa	Predicted RBP	28.83	■■■□□ 2.21
FLOT1-208	ENST00000470643	ADCY9	O60503	1353 aa		28.83	■■■□□ 2.21
FLOT1-208	ENST00000470643	TEF	Q10587	303 aa		28.82	■■■□□ 2.2
FLOT1-208	ENST00000470643	GNAT3	A8MTJ3	354 aa		28.81	■■■□□ 2.2
FLOT1-208	ENST00000470643	FCHSD2	O94868	740 aa		28.81	■■■□□ 2.2
FLOT1-208	ENST00000470643	COL3A1	P02461	1466 aa	Predicted RBP	28.8	■■■□□ 2.2
FLOT1-208	ENST00000470643	SOS1	Q07889	1333 aa	Predicted RBP	28.8	■■■□□ 2.2
FLOT1-208	ENST00000470643	USPL1	Q5W0Q7	1092 aa		28.79	■■■□□ 2.2
FLOT1-208	ENST00000470643	ARHGAP27	Q6ZUM4	889 aa		28.79	■■■□□ 2.2
FLOT1-208	ENST00000470643	PIM2	Q9P1W9	311 aa		28.79	■■■□□ 2.2
FLOT1-208	ENST00000470643	NUDC	Q9Y266	331 aa		28.79	■■■□□ 2.2
FLOT1-208	ENST00000470643	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.78	■■■□□ 2.2
FLOT1-208	ENST00000470643	STARD3NL	O95772	234 aa		28.78	■■■□□ 2.2
FLOT1-208	ENST00000470643	DDR1	Q08345	913 aa		28.78	■■■□□ 2.2
FLOT1-208	ENST00000470643	NARF	Q9UHQ1	456 aa		28.77	■■■□□ 2.2
FLOT1-208	ENST00000470643	KCP	Q6ZWJ8	1503 aa		28.77	■■■□□ 2.2
FLOT1-208	ENST00000470643	ADAMTS7	Q9UKP4	1686 aa		28.77	■■■□□ 2.2
FLOT1-208	ENST00000470643	COL15A1	P39059	1388 aa		28.76	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms