RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	ABCA3	Q99758	1704 aa		13.97	□□□□□ -0.17
SND1-208	ENST00000470463	CHRNA2	Q15822	529 aa		13.96	□□□□□ -0.17
SND1-208	ENST00000470463	CCDC30	Q5VVM6	783 aa		13.96	□□□□□ -0.17
SND1-208	ENST00000470463	IFNL2	Q8IZJ0	200 aa		13.96	□□□□□ -0.17
SND1-208	ENST00000470463	CARD10	Q9BWT7	1032 aa		13.96	□□□□□ -0.17
SND1-208	ENST00000470463	USP21	Q9UK80	565 aa		13.96	□□□□□ -0.17
SND1-208	ENST00000470463	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.96	□□□□□ -0.17
SND1-208	ENST00000470463	COL5A2	P05997	1499 aa	Predicted RBP	13.95	□□□□□ -0.18
SND1-208	ENST00000470463	RNMT	O43148	476 aa	Known RBP	13.95	□□□□□ -0.18
SND1-208	ENST00000470463	ITPRIP	Q8IWB1	547 aa		13.95	□□□□□ -0.18
SND1-208	ENST00000470463	KDM2B	Q8NHM5	1336 aa		13.94	□□□□□ -0.18
SND1-208	ENST00000470463	ELL2	O00472	640 aa	Predicted RBP	13.94	□□□□□ -0.18
SND1-208	ENST00000470463	TCERG1	O14776	1098 aa	Known RBP	13.94	□□□□□ -0.18
SND1-208	ENST00000470463	EVA1C	P58658	441 aa		13.94	□□□□□ -0.18
SND1-208	ENST00000470463	TOM1L2	Q6ZVM7	507 aa		13.94	□□□□□ -0.18
SND1-208	ENST00000470463	DCAF5	Q96JK2	942 aa		13.94	□□□□□ -0.18
SND1-208	ENST00000470463	RWDD1	Q9H446	243 aa	Predicted RBP	13.94	□□□□□ -0.18
SND1-208	ENST00000470463	BTBD11	A6QL63	1104 aa		13.93	□□□□□ -0.18
SND1-208	ENST00000470463	RLBP1	P12271	317 aa		13.93	□□□□□ -0.18
SND1-208	ENST00000470463	ADAMTS7	Q9UKP4	1686 aa		13.93	□□□□□ -0.18
SND1-208	ENST00000470463	PARP4	Q9UKK3	1724 aa	Known RBP	13.93	□□□□□ -0.18
SND1-208	ENST00000470463	ABCC4	O15439	1325 aa		13.92	□□□□□ -0.18
SND1-208	ENST00000470463	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.92	□□□□□ -0.18
SND1-208	ENST00000470463	CACNA1F	O60840	1977 aa		13.92	□□□□□ -0.18
SND1-208	ENST00000470463	PKD1L3	Q7Z443	1732 aa		13.92	□□□□□ -0.18
SND1-208	ENST00000470463	PCDH11X	Q9BZA7	1347 aa		13.91	□□□□□ -0.18
SND1-208	ENST00000470463	PCDH11Y	Q9BZA8	1340 aa		13.91	□□□□□ -0.18
SND1-208	ENST00000470463	COL14A1	Q05707	1796 aa	Known RBP	13.91	□□□□□ -0.18
SND1-208	ENST00000470463	PHKG2	P15735	406 aa		13.91	□□□□□ -0.18
SND1-208	ENST00000470463	MPRIP	Q6WCQ1	1025 aa		13.91	□□□□□ -0.18
SND1-208	ENST00000470463	TMEM57	Q8N5G2	664 aa		13.91	□□□□□ -0.18
SND1-208	ENST00000470463	RGS12	O14924	1447 aa		13.9	□□□□□ -0.18
SND1-208	ENST00000470463	SLC4A2	P04920	1241 aa		13.9	□□□□□ -0.18
SND1-208	ENST00000470463	IL2RB	P14784	551 aa		13.9	□□□□□ -0.18
SND1-208	ENST00000470463	EIF4A1	P60842	406 aa	Known RBP	13.9	□□□□□ -0.18
SND1-208	ENST00000470463	LGR6	Q9HBX8	967 aa		13.9	□□□□□ -0.18
SND1-208	ENST00000470463	MIS18A	Q9NYP9	233 aa		13.9	□□□□□ -0.18
SND1-208	ENST00000470463	MEGF6	O75095	1541 aa		13.9	□□□□□ -0.19
SND1-208	ENST00000470463	KDM3B	Q7LBC6	1761 aa		13.89	□□□□□ -0.19
SND1-208	ENST00000470463	INTS3	Q68E01	1043 aa	Known RBP	13.89	□□□□□ -0.19
SND1-208	ENST00000470463	ZCRB1	Q8TBF4	217 aa	Known RBP	13.89	□□□□□ -0.19
SND1-208	ENST00000470463	ZBTB40	Q9NUA8	1239 aa		13.89	□□□□□ -0.19
SND1-208	ENST00000470463	CCT4	P50991	539 aa	Known RBP	13.88	□□□□□ -0.19
SND1-208	ENST00000470463	HDAC1	Q13547	482 aa	Predicted RBP	13.88	□□□□□ -0.19
SND1-208	ENST00000470463	HDGFL1	Q5TGJ6	251 aa		13.88	□□□□□ -0.19
SND1-208	ENST00000470463	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.88	□□□□□ -0.19
SND1-208	ENST00000470463	SLC52A2	Q9HAB3	445 aa		13.88	□□□□□ -0.19
SND1-208	ENST00000470463	MRC1	P22897	1456 aa		13.87	□□□□□ -0.19
SND1-208	ENST00000470463	SRCAP	Q6ZRS2	3230 aa		13.87	□□□□□ -0.19
SND1-208	ENST00000470463	SCN11A	Q9UI33	1791 aa		13.87	□□□□□ -0.19
SND1-208	ENST00000470463	TSHZ2	Q9NRE2	1034 aa		13.87	□□□□□ -0.19
SND1-208	ENST00000470463	ERVV-2	B6SEH9	535 aa		13.86	□□□□□ -0.19
SND1-208	ENST00000470463	ZBTB7B	O15156	539 aa	Predicted RBP	13.86	□□□□□ -0.19
SND1-208	ENST00000470463	NKX1-1	Q15270	411 aa	Predicted RBP	13.86	□□□□□ -0.19
SND1-208	ENST00000470463	KRT24	Q2M2I5	525 aa		13.86	□□□□□ -0.19
SND1-208	ENST00000470463	STRN4	Q9NRL3	753 aa		13.86	□□□□□ -0.19
SND1-208	ENST00000470463	TNN	Q9UQP3	1299 aa		13.86	□□□□□ -0.19
SND1-208	ENST00000470463	SIPA1L3	O60292	1781 aa	Predicted RBP	13.86	□□□□□ -0.19
SND1-208	ENST00000470463	HEG1	Q9ULI3	1381 aa		13.85	□□□□□ -0.19
SND1-208	ENST00000470463	TTC5	Q8N0Z6	440 aa		13.85	□□□□□ -0.19
SND1-208	ENST00000470463	BTG4	Q9NY30	223 aa		13.85	□□□□□ -0.19
SND1-208	ENST00000470463	DBF4	Q9UBU7	674 aa	Predicted RBP	13.85	□□□□□ -0.19
SND1-208	ENST00000470463	THRAP3	Q9Y2W1	955 aa	Known RBP	13.85	□□□□□ -0.19
SND1-208	ENST00000470463	PXDNL	A1KZ92	1463 aa		13.85	□□□□□ -0.19
SND1-208	ENST00000470463	VIRMA	Q69YN4	1812 aa	Known RBP	13.85	□□□□□ -0.19
SND1-208	ENST00000470463	KDM6A	O15550	1401 aa	Predicted RBP	13.84	□□□□□ -0.19
SND1-208	ENST00000470463	CYP27B1	O15528	508 aa		13.84	□□□□□ -0.19
SND1-208	ENST00000470463	CABP4	P57796	275 aa		13.84	□□□□□ -0.19
SND1-208	ENST00000470463	FLII	Q13045	1269 aa		13.84	□□□□□ -0.19
SND1-208	ENST00000470463	SF3B2	Q13435	895 aa	Known RBP	13.84	□□□□□ -0.19
SND1-208	ENST00000470463	ZNF790	Q6PG37	636 aa		13.84	□□□□□ -0.19
SND1-208	ENST00000470463	LARP1	Q6PKG0	1096 aa	Known RBP	13.84	□□□□□ -0.19
SND1-208	ENST00000470463	GJD4	Q96KN9	370 aa	Predicted RBP	13.84	□□□□□ -0.19
SND1-208	ENST00000470463	PCDHB15	Q9Y5E8	787 aa		13.83	□□□□□ -0.2
SND1-208	ENST00000470463	GIGYF1	O75420	1035 aa	Predicted RBP	13.82	□□□□□ -0.2
SND1-208	ENST00000470463	IGHD	P01880	384 aa		13.82	□□□□□ -0.2
SND1-208	ENST00000470463	FKBP5	Q13451	457 aa	Predicted RBP	13.82	□□□□□ -0.2
SND1-208	ENST00000470463	GCC1	Q96CN9	775 aa		13.82	□□□□□ -0.2
SND1-208	ENST00000470463	HYPK	Q9NX55	129 aa		13.82	□□□□□ -0.2
SND1-208	ENST00000470463	HDAC5	Q9UQL6	1122 aa		13.82	□□□□□ -0.2
SND1-208	ENST00000470463	GNAI3	P08754	354 aa		13.81	□□□□□ -0.2
SND1-208	ENST00000470463	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.81	□□□□□ -0.2
SND1-208	ENST00000470463	NFATC2IP	Q8NCF5	419 aa		13.81	□□□□□ -0.2
SND1-208	ENST00000470463	FMNL2	Q96PY5	1086 aa		13.81	□□□□□ -0.2
SND1-208	ENST00000470463	PLCH1	Q4KWH8	1693 aa		13.81	□□□□□ -0.2
SND1-208	ENST00000470463	DDX58	O95786	925 aa	Known RBP	13.8	□□□□□ -0.2
SND1-208	ENST00000470463	SNRPA1	P09661	255 aa	Known RBP	13.8	□□□□□ -0.2
SND1-208	ENST00000470463	SMC5	Q8IY18	1101 aa		13.8	□□□□□ -0.2
SND1-208	ENST00000470463	ERBB4	Q15303	1308 aa		13.8	□□□□□ -0.2
SND1-208	ENST00000470463	EIF2S2	P20042	333 aa	Known RBP	13.79	□□□□□ -0.2
SND1-208	ENST00000470463	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
SND1-208	ENST00000470463	DISP2	A7MBM2	1401 aa		13.79	□□□□□ -0.2
SND1-208	ENST00000470463	ATRN	O75882	1429 aa		13.79	□□□□□ -0.2
SND1-208	ENST00000470463	NWD2	Q9ULI1	1742 aa		13.78	□□□□□ -0.2
SND1-208	ENST00000470463	EXOC5	O00471	708 aa		13.78	□□□□□ -0.2
SND1-208	ENST00000470463	HMMR	O75330	724 aa		13.78	□□□□□ -0.2
SND1-208	ENST00000470463	UNC5CL	Q8IV45	518 aa		13.78	□□□□□ -0.2
SND1-208	ENST00000470463	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.78	□□□□□ -0.2
SND1-208	ENST00000470463	KCNQ3	O43525	872 aa		13.77	□□□□□ -0.21
SND1-208	ENST00000470463	G2E3	Q7L622	706 aa		13.77	□□□□□ -0.21

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