RNA–Protein interactions for RNA: ENST00000470455.5

ATP6V1A-204, Transcript of ATPase H+ transporting V1 subunit A, humanhuman

TSL 2

Gene ATP6V1A, Length 2,266 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1A-204ENST00000470455 PKD1L3Q7Z443 1732 aa10.75□□□□□ -0.69
ATP6V1A-204ENST00000470455 PARP4Q9UKK3 1724 aaKnown RBP10.75□□□□□ -0.69
ATP6V1A-204ENST00000470455 FRAT1Q92837 279 aaPredicted RBP10.74□□□□□ -0.69
ATP6V1A-204ENST00000470455 SMC4Q9NTJ3 1288 aa10.74□□□□□ -0.69
ATP6V1A-204ENST00000470455 NWD2Q9ULI1 1742 aa10.74□□□□□ -0.69
ATP6V1A-204ENST00000470455 LRRC37A3O60309 1634 aa10.74□□□□□ -0.69
ATP6V1A-204ENST00000470455 A0A0G2JS52 829 aa10.74□□□□□ -0.69
ATP6V1A-204ENST00000470455 CABP4P57796 275 aa10.74□□□□□ -0.69
ATP6V1A-204ENST00000470455 NKX1-1Q15270 411 aaPredicted RBP10.74□□□□□ -0.69
ATP6V1A-204ENST00000470455 FAM98CQ17RN3 349 aaKnown RBP10.74□□□□□ -0.69
ATP6V1A-204ENST00000470455 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.74□□□□□ -0.69
ATP6V1A-204ENST00000470455 CDCA7Q9BWT1 371 aaPredicted RBP10.74□□□□□ -0.69
ATP6V1A-204ENST00000470455 C20orf194Q5TEA3 1177 aa10.73□□□□□ -0.69
ATP6V1A-204ENST00000470455 BARGINQ6ZT62 677 aa10.73□□□□□ -0.69
ATP6V1A-204ENST00000470455 CANXP27824 592 aaKnown RBP10.73□□□□□ -0.69
ATP6V1A-204ENST00000470455 SLC39A6Q13433 755 aa10.73□□□□□ -0.69
ATP6V1A-204ENST00000470455 DDB1Q16531 1140 aa10.73□□□□□ -0.69
ATP6V1A-204ENST00000470455 FBXO41Q8TF61 875 aa10.73□□□□□ -0.69
ATP6V1A-204ENST00000470455 EIF4A1P60842 406 aaKnown RBP10.72□□□□□ -0.69
ATP6V1A-204ENST00000470455 ALDH1L2Q3SY69 923 aa10.72□□□□□ -0.69
ATP6V1A-204ENST00000470455 ERVV-2B6SEH9 535 aa10.72□□□□□ -0.69
ATP6V1A-204ENST00000470455 MRPL50Q8N5N7 158 aaKnown RBP10.72□□□□□ -0.69
ATP6V1A-204ENST00000470455 ZNF428Q96B54 188 aa10.72□□□□□ -0.69
ATP6V1A-204ENST00000470455 NECTIN2Q92692 538 aa10.71□□□□□ -0.69
ATP6V1A-204ENST00000470455 NOB1Q9ULX3 412 aaKnown RBP10.71□□□□□ -0.69
ATP6V1A-204ENST00000470455 TNNQ9UQP3 1299 aa10.71□□□□□ -0.69
ATP6V1A-204ENST00000470455 ADAMTS7Q9UKP4 1686 aa10.71□□□□□ -0.7
ATP6V1A-204ENST00000470455 GJD4Q96KN9 370 aaPredicted RBP10.7□□□□□ -0.7
ATP6V1A-204ENST00000470455 SCN11AQ9UI33 1791 aa10.7□□□□□ -0.7
ATP6V1A-204ENST00000470455 ZNF790Q6PG37 636 aa10.7□□□□□ -0.7
ATP6V1A-204ENST00000470455 MARCH10Q8NA82 808 aaPredicted RBP10.7□□□□□ -0.7
ATP6V1A-204ENST00000470455 EXOC6Q8TAG9 804 aa10.7□□□□□ -0.7
ATP6V1A-204ENST00000470455 CRBNQ96SW2 442 aa10.7□□□□□ -0.7
ATP6V1A-204ENST00000470455 QTRT2Q9H974 415 aaKnown RBP10.7□□□□□ -0.7
ATP6V1A-204ENST00000470455 SHANK3Q9BYB0 1731 aa10.7□□□□□ -0.7
ATP6V1A-204ENST00000470455 TRPC5Q9UL62 973 aaPredicted RBP10.69□□□□□ -0.7
ATP6V1A-204ENST00000470455 TNS2Q63HR2 1409 aa10.69□□□□□ -0.7
ATP6V1A-204ENST00000470455 VIRMAQ69YN4 1812 aaKnown RBP10.69□□□□□ -0.7
ATP6V1A-204ENST00000470455 EIF2S2P20042 333 aaKnown RBP10.69□□□□□ -0.7
ATP6V1A-204ENST00000470455 ZKSCAN2Q63HK3 967 aa10.69□□□□□ -0.7
ATP6V1A-204ENST00000470455 TTC5Q8N0Z6 440 aa10.69□□□□□ -0.7
ATP6V1A-204ENST00000470455 PANK1Q8TE04 598 aa10.69□□□□□ -0.7
ATP6V1A-204ENST00000470455 CLUAP1Q96AJ1 413 aa10.69□□□□□ -0.7
ATP6V1A-204ENST00000470455 PRAMEF22A3QJZ6 481 aa10.68□□□□□ -0.7
ATP6V1A-204ENST00000470455 SLC4A2P04920 1241 aa10.68□□□□□ -0.7
ATP6V1A-204ENST00000470455 TMOD3Q9NYL9 352 aa10.68□□□□□ -0.7
ATP6V1A-204ENST00000470455 IPO8O15397 1037 aaKnown RBP10.68□□□□□ -0.7
ATP6V1A-204ENST00000470455 GIGYF1O75420 1035 aaPredicted RBP10.68□□□□□ -0.7
ATP6V1A-204ENST00000470455 BRPF1P55201 1214 aaPredicted RBP10.68□□□□□ -0.7
ATP6V1A-204ENST00000470455 CCDC30Q5VVM6 783 aa10.68□□□□□ -0.7
ATP6V1A-204ENST00000470455 ERICH6BQ5W0A0 696 aa10.68□□□□□ -0.7
ATP6V1A-204ENST00000470455 PIGBQ92521 554 aa10.68□□□□□ -0.7
ATP6V1A-204ENST00000470455 SYTL4Q96C24 671 aaPredicted RBP10.68□□□□□ -0.7
ATP6V1A-204ENST00000470455 ZNF496Q96IT1 587 aaPredicted RBP10.68□□□□□ -0.7
ATP6V1A-204ENST00000470455 MRC1P22897 1456 aa10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 SIPA1L3O60292 1781 aaPredicted RBP10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 EIF5BO60841 1220 aaKnown RBP10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 ATRNO75882 1429 aa10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 RLBP1P12271 317 aa10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 PRIM1P49642 420 aaKnown RBP10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 PDE3AQ14432 1141 aa10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 HDGFL1Q5TGJ6 251 aa10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 ATF7IPQ6VMQ6 1270 aa10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 WNK3Q9BYP7 1800 aa10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 KDM3BQ7LBC6 1761 aa10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 SOS1Q07889 1333 aaPredicted RBP10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 KIF16BQ96L93 1317 aa10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 TRIM27P14373 513 aa10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 ACSBG1Q96GR2 724 aa10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 STK31Q9BXU1 1019 aa10.67□□□□□ -0.7
ATP6V1A-204ENST00000470455 HEG1Q9ULI3 1381 aa10.66□□□□□ -0.7
ATP6V1A-204ENST00000470455 FAM182BQ5T319 152 aa10.66□□□□□ -0.7
ATP6V1A-204ENST00000470455 G2E3Q7L622 706 aa10.66□□□□□ -0.7
ATP6V1A-204ENST00000470455 DZIP1LQ8IYY4 767 aaKnown RBP10.66□□□□□ -0.7
ATP6V1A-204ENST00000470455 FMNL2Q96PY5 1086 aa10.66□□□□□ -0.7
ATP6V1A-204ENST00000470455 COG6Q9Y2V7 657 aa10.66□□□□□ -0.7
ATP6V1A-204ENST00000470455 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.66□□□□□ -0.7
ATP6V1A-204ENST00000470455 PTCD1O75127 700 aaKnown RBP10.65□□□□□ -0.7
ATP6V1A-204ENST00000470455 HOXB7P09629 217 aa10.65□□□□□ -0.7
ATP6V1A-204ENST00000470455 FTSJ3Q8IY81 847 aaKnown RBP10.65□□□□□ -0.7
ATP6V1A-204ENST00000470455 PPP4R2Q9NY27 417 aa10.65□□□□□ -0.7
ATP6V1A-204ENST00000470455 ASAP1Q9ULH1 1129 aa10.65□□□□□ -0.7
ATP6V1A-204ENST00000470455 SEPT12Q8IYM1 358 aa10.65□□□□□ -0.7
ATP6V1A-204ENST00000470455 KAT6BQ8WYB5 2073 aa10.64□□□□□ -0.71
ATP6V1A-204ENST00000470455 GLI3P10071 1580 aa10.64□□□□□ -0.71
ATP6V1A-204ENST00000470455 ONECUT3O60422 494 aaPredicted RBP10.64□□□□□ -0.71
ATP6V1A-204ENST00000470455 SNRPA1P09661 255 aaKnown RBP10.64□□□□□ -0.71
ATP6V1A-204ENST00000470455 MS4A1P11836 297 aa10.64□□□□□ -0.71
ATP6V1A-204ENST00000470455 ARHGAP45Q92619 1136 aa10.64□□□□□ -0.71
ATP6V1A-204ENST00000470455 ATG3Q9NT62 314 aa10.64□□□□□ -0.71
ATP6V1A-204ENST00000470455 TOGARAM1Q9Y4F4 1720 aa10.64□□□□□ -0.71
ATP6V1A-204ENST00000470455 ANXA1P04083 346 aa10.64□□□□□ -0.71
ATP6V1A-204ENST00000470455 CHPF2Q9P2E5 772 aa10.64□□□□□ -0.71
ATP6V1A-204ENST00000470455 USP16Q9Y5T5 823 aa10.64□□□□□ -0.71
ATP6V1A-204ENST00000470455 ZNF772Q68DY9 489 aaPredicted RBP10.63□□□□□ -0.71
ATP6V1A-204ENST00000470455 TMEM57Q8N5G2 664 aa10.63□□□□□ -0.71
ATP6V1A-204ENST00000470455 CHMP4AQ9BY43 222 aa10.63□□□□□ -0.71
ATP6V1A-204ENST00000470455 API5Q9BZZ5 524 aaKnown RBP10.63□□□□□ -0.71
ATP6V1A-204ENST00000470455 KCNQ2O43526 872 aa10.63□□□□□ -0.71
ATP6V1A-204ENST00000470455 B4GALNT3Q6L9W6 998 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms