RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 C8orf58Q8NAV2 365 aa19.49■□□□□ 0.71
COL4A5-203ENST00000470339 BTBD11A6QL63 1104 aa19.48■□□□□ 0.71
COL4A5-203ENST00000470339 BRPF1P55201 1214 aaPredicted RBP19.48■□□□□ 0.71
COL4A5-203ENST00000470339 FKBP8Q14318 412 aa19.48■□□□□ 0.71
COL4A5-203ENST00000470339 SLC52A2Q9HAB3 445 aa19.48■□□□□ 0.71
COL4A5-203ENST00000470339 MIS18AQ9NYP9 233 aa19.48■□□□□ 0.71
COL4A5-203ENST00000470339 TNS2Q63HR2 1409 aa19.48■□□□□ 0.71
COL4A5-203ENST00000470339 BCAR3O75815 825 aa19.47■□□□□ 0.71
COL4A5-203ENST00000470339 TSPYL6Q8N831 410 aa19.47■□□□□ 0.71
COL4A5-203ENST00000470339 CCDC9Q9Y3X0 531 aaKnown RBP19.47■□□□□ 0.71
COL4A5-203ENST00000470339 DDX54Q8TDD1 881 aaKnown RBP19.46■□□□□ 0.71
COL4A5-203ENST00000470339 CHMP4AQ9BY43 222 aa19.46■□□□□ 0.71
COL4A5-203ENST00000470339 SSH1Q8WYL5 1049 aa19.45■□□□□ 0.7
COL4A5-203ENST00000470339 AFF2P51816 1311 aa19.45■□□□□ 0.7
COL4A5-203ENST00000470339 HOXB7P09629 217 aa19.44■□□□□ 0.7
COL4A5-203ENST00000470339 NFATC2IPQ8NCF5 419 aa19.44■□□□□ 0.7
COL4A5-203ENST00000470339 CABP4P57796 275 aa19.43■□□□□ 0.7
COL4A5-203ENST00000470339 EIF4A1P60842 406 aaKnown RBP19.43■□□□□ 0.7
COL4A5-203ENST00000470339 DDB1Q16531 1140 aa19.43■□□□□ 0.7
COL4A5-203ENST00000470339 SMC4Q9NTJ3 1288 aa19.43■□□□□ 0.7
COL4A5-203ENST00000470339 ATRNO75882 1429 aa19.42■□□□□ 0.7
COL4A5-203ENST00000470339 ITGB4P16144 1822 aa19.42■□□□□ 0.7
COL4A5-203ENST00000470339 ELL2O00472 640 aaPredicted RBP19.42■□□□□ 0.7
COL4A5-203ENST00000470339 PDE3AQ14432 1141 aa19.42■□□□□ 0.7
COL4A5-203ENST00000470339 TRPC5Q9UL62 973 aaPredicted RBP19.42■□□□□ 0.7
COL4A5-203ENST00000470339 KIF16BQ96L93 1317 aa19.42■□□□□ 0.7
COL4A5-203ENST00000470339 HEG1Q9ULI3 1381 aa19.42■□□□□ 0.7
COL4A5-203ENST00000470339 TOGARAM1Q9Y4F4 1720 aa19.42■□□□□ 0.7
COL4A5-203ENST00000470339 IPO8O15397 1037 aaKnown RBP19.41■□□□□ 0.7
COL4A5-203ENST00000470339 MS4A1P11836 297 aa19.41■□□□□ 0.7
COL4A5-203ENST00000470339 PLIN1O60240 522 aa19.4■□□□□ 0.7
COL4A5-203ENST00000470339 KRT24Q2M2I5 525 aa19.4■□□□□ 0.7
COL4A5-203ENST00000470339 ZNF790Q6PG37 636 aa19.4■□□□□ 0.7
COL4A5-203ENST00000470339 ILDR2Q71H61 639 aa19.4■□□□□ 0.7
COL4A5-203ENST00000470339 MRPL50Q8N5N7 158 aaKnown RBP19.4■□□□□ 0.7
COL4A5-203ENST00000470339 GJD4Q96KN9 370 aaPredicted RBP19.4■□□□□ 0.7
COL4A5-203ENST00000470339 THSD7AQ9UPZ6 1657 aa19.4■□□□□ 0.7
COL4A5-203ENST00000470339 ARHGAP45Q92619 1136 aa19.39■□□□□ 0.69
COL4A5-203ENST00000470339 GLI3P10071 1580 aa19.39■□□□□ 0.69
COL4A5-203ENST00000470339 PAPPAQ13219 1627 aa19.39■□□□□ 0.69
COL4A5-203ENST00000470339 ONECUT3O60422 494 aaPredicted RBP19.38■□□□□ 0.69
COL4A5-203ENST00000470339 CANXP27824 592 aaKnown RBP19.38■□□□□ 0.69
COL4A5-203ENST00000470339 IRX6P78412 446 aaPredicted RBP19.38■□□□□ 0.69
COL4A5-203ENST00000470339 FAM98CQ17RN3 349 aaKnown RBP19.38■□□□□ 0.69
COL4A5-203ENST00000470339 CCDC30Q5VVM6 783 aa19.38■□□□□ 0.69
COL4A5-203ENST00000470339 ZKSCAN2Q63HK3 967 aa19.38■□□□□ 0.69
COL4A5-203ENST00000470339 UBR2Q8IWV8 1755 aa19.38■□□□□ 0.69
COL4A5-203ENST00000470339 BCL2L13Q9BXK5 485 aa19.38■□□□□ 0.69
COL4A5-203ENST00000470339 KAT6BQ8WYB5 2073 aa19.37■□□□□ 0.69
COL4A5-203ENST00000470339 KCNQ3O43525 872 aa19.37■□□□□ 0.69
COL4A5-203ENST00000470339 FRAT1Q92837 279 aaPredicted RBP19.37■□□□□ 0.69
COL4A5-203ENST00000470339 NOB1Q9ULX3 412 aaKnown RBP19.36■□□□□ 0.69
COL4A5-203ENST00000470339 GIGYF1O75420 1035 aaPredicted RBP19.35■□□□□ 0.69
COL4A5-203ENST00000470339 ATF7IPQ6VMQ6 1270 aa19.35■□□□□ 0.69
COL4A5-203ENST00000470339 TTC5Q8N0Z6 440 aa19.35■□□□□ 0.69
COL4A5-203ENST00000470339 MARCH10Q8NA82 808 aaPredicted RBP19.35■□□□□ 0.69
COL4A5-203ENST00000470339 TMOD3Q9NYL9 352 aa19.35■□□□□ 0.69
COL4A5-203ENST00000470339 DOT1LQ8TEK3 1739 aa19.34■□□□□ 0.69
COL4A5-203ENST00000470339 FMNL2Q96PY5 1086 aa19.34■□□□□ 0.69
COL4A5-203ENST00000470339 STK31Q9BXU1 1019 aa19.34■□□□□ 0.69
COL4A5-203ENST00000470339 QTRT2Q9H974 415 aaKnown RBP19.34■□□□□ 0.69
COL4A5-203ENST00000470339 SLC39A6Q13433 755 aa19.33■□□□□ 0.68
COL4A5-203ENST00000470339 C20orf194Q5TEA3 1177 aa19.33■□□□□ 0.68
COL4A5-203ENST00000470339 BCL9O00512 1426 aa19.33■□□□□ 0.68
COL4A5-203ENST00000470339 PTPRCP08575 1304 aa19.32■□□□□ 0.68
COL4A5-203ENST00000470339 HDGFL1Q5TGJ6 251 aa19.32■□□□□ 0.68
COL4A5-203ENST00000470339 ZNF772Q68DY9 489 aaPredicted RBP19.32■□□□□ 0.68
COL4A5-203ENST00000470339 DZIP1LQ8IYY4 767 aaKnown RBP19.32■□□□□ 0.68
COL4A5-203ENST00000470339 PPP4R2Q9NY27 417 aa19.32■□□□□ 0.68
COL4A5-203ENST00000470339 RGS17Q9UGC6 210 aaPredicted RBP19.32■□□□□ 0.68
COL4A5-203ENST00000470339 SLC4A2P04920 1241 aa19.31■□□□□ 0.68
COL4A5-203ENST00000470339 SNRPA1P09661 255 aaKnown RBP19.31■□□□□ 0.68
COL4A5-203ENST00000470339 TRIM27P14373 513 aa19.31■□□□□ 0.68
COL4A5-203ENST00000470339 AAMPQ13685 434 aa19.31■□□□□ 0.68
COL4A5-203ENST00000470339 PIGBQ92521 554 aa19.31■□□□□ 0.68
COL4A5-203ENST00000470339 ZNF496Q96IT1 587 aaPredicted RBP19.31■□□□□ 0.68
COL4A5-203ENST00000470339 API5Q9BZZ5 524 aaKnown RBP19.31■□□□□ 0.68
COL4A5-203ENST00000470339 LAMB4A4D0S4 1761 aa19.31■□□□□ 0.68
COL4A5-203ENST00000470339 C5P01031 1676 aa19.3■□□□□ 0.68
COL4A5-203ENST00000470339 CRBNQ96SW2 442 aa19.3■□□□□ 0.68
COL4A5-203ENST00000470339 KCPQ6ZWJ8 1503 aa19.3■□□□□ 0.68
COL4A5-203ENST00000470339 SOCS7O14512 581 aa19.29■□□□□ 0.68
COL4A5-203ENST00000470339 TCERG1O14776 1098 aaKnown RBP19.29■□□□□ 0.68
COL4A5-203ENST00000470339 FTSJ3Q8IY81 847 aaKnown RBP19.29■□□□□ 0.68
COL4A5-203ENST00000470339 EXOC6Q8TAG9 804 aa19.29■□□□□ 0.68
COL4A5-203ENST00000470339 PRIM1P49642 420 aaKnown RBP19.28■□□□□ 0.68
COL4A5-203ENST00000470339 PANK1Q8TE04 598 aa19.28■□□□□ 0.68
COL4A5-203ENST00000470339 DBF4Q9UBU7 674 aaPredicted RBP19.28■□□□□ 0.68
COL4A5-203ENST00000470339 EIF2S2P20042 333 aaKnown RBP19.27■□□□□ 0.68
COL4A5-203ENST00000470339 VSIG10Q8N0Z9 540 aa19.27■□□□□ 0.68
COL4A5-203ENST00000470339 A0A0G2JS52 829 aa19.26■□□□□ 0.67
COL4A5-203ENST00000470339 RLBP1P12271 317 aa19.26■□□□□ 0.67
COL4A5-203ENST00000470339 MYT1Q01538 1121 aa19.26■□□□□ 0.67
COL4A5-203ENST00000470339 TEX13AQ9BXU3 409 aaPredicted RBP19.26■□□□□ 0.67
COL4A5-203ENST00000470339 ATG3Q9NT62 314 aa19.26■□□□□ 0.67
COL4A5-203ENST00000470339 RBM6P78332 1123 aaKnown RBP19.25■□□□□ 0.67
COL4A5-203ENST00000470339 MVPQ14764 893 aaKnown RBP19.25■□□□□ 0.67
COL4A5-203ENST00000470339 SEPT12Q8IYM1 358 aa19.25■□□□□ 0.67
COL4A5-203ENST00000470339 ABCC4O15439 1325 aa19.25■□□□□ 0.67
COL4A5-203ENST00000470339 ERBB4Q15303 1308 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms