RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 ANKLE2Q86XL3 938 aa6.7□□□□□ -1.34
SF3B1-208ENST00000470268 SLC6A16Q9GZN6 736 aa6.7□□□□□ -1.34
SF3B1-208ENST00000470268 EID1Q9Y6B2 187 aa6.7□□□□□ -1.34
SF3B1-208ENST00000470268 NRXN3Q9Y4C0 1643 aa6.7□□□□□ -1.34
SF3B1-208ENST00000470268 TRPM1Q7Z4N2 1603 aa6.69□□□□□ -1.34
SF3B1-208ENST00000470268 GDF9O60383 454 aa6.69□□□□□ -1.34
SF3B1-208ENST00000470268 SLC26A8Q96RN1 970 aa6.69□□□□□ -1.34
SF3B1-208ENST00000470268 ROCK2O75116 1388 aaKnown RBP6.69□□□□□ -1.34
SF3B1-208ENST00000470268 METP08581 1390 aa6.69□□□□□ -1.34
SF3B1-208ENST00000470268 GPRASP1Q5JY77 1395 aa6.69□□□□□ -1.34
SF3B1-208ENST00000470268 ASXL1Q8IXJ9 1541 aa6.69□□□□□ -1.34
SF3B1-208ENST00000470268 ALKQ9UM73 1620 aa6.69□□□□□ -1.34
SF3B1-208ENST00000470268 MED14O60244 1454 aa6.69□□□□□ -1.34
SF3B1-208ENST00000470268 ADGRB1O14514 1584 aa6.69□□□□□ -1.34
SF3B1-208ENST00000470268 SETBP1Q9Y6X0 1596 aa6.69□□□□□ -1.34
SF3B1-208ENST00000470268 SKIV2LQ15477 1246 aaKnown RBP6.69□□□□□ -1.34
SF3B1-208ENST00000470268 PCMTD1Q96MG8 357 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-208ENST00000470268 FAM187AA6NFU0 413 aa6.68□□□□□ -1.34
SF3B1-208ENST00000470268 PPEF1O14829 653 aaPredicted RBP6.68□□□□□ -1.34
SF3B1-208ENST00000470268 DIXDC1Q155Q3 683 aa6.68□□□□□ -1.34
SF3B1-208ENST00000470268 HIRIP3Q9BW71 556 aaPredicted RBP6.68□□□□□ -1.34
SF3B1-208ENST00000470268 CARD11Q9BXL7 1154 aa6.68□□□□□ -1.34
SF3B1-208ENST00000470268 SLC10A3P09131 477 aa6.67□□□□□ -1.34
SF3B1-208ENST00000470268 SULF1Q8IWU6 871 aa6.67□□□□□ -1.34
SF3B1-208ENST00000470268 IQGAP1P46940 1657 aa6.67□□□□□ -1.34
SF3B1-208ENST00000470268 NPHP4O75161 1426 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-208ENST00000470268 SETD1AO15047 1707 aaKnown RBP6.67□□□□□ -1.34
SF3B1-208ENST00000470268 TBX22Q9Y458 520 aa6.67□□□□□ -1.34
SF3B1-208ENST00000470268 PTPRUQ92729 1446 aa6.66□□□□□ -1.34
SF3B1-208ENST00000470268 RPIAP49247 311 aa6.66□□□□□ -1.34
SF3B1-208ENST00000470268 TRAK1Q9UPV9 953 aa6.66□□□□□ -1.34
SF3B1-208ENST00000470268 KIAA1210Q9ULL0 1709 aa6.66□□□□□ -1.34
SF3B1-208ENST00000470268 USP47Q96K76 1375 aa6.66□□□□□ -1.34
SF3B1-208ENST00000470268 HSPA5P11021 654 aaKnown RBP6.66□□□□□ -1.34
SF3B1-208ENST00000470268 CD46P15529 392 aa6.66□□□□□ -1.34
SF3B1-208ENST00000470268 SCUBE3Q8IX30 993 aa6.66□□□□□ -1.34
SF3B1-208ENST00000470268 STK26Q9P289 416 aa6.66□□□□□ -1.34
SF3B1-208ENST00000470268 YTHDC2Q9H6S0 1430 aaKnown RBP6.65□□□□□ -1.34
SF3B1-208ENST00000470268 STRCQ7RTU9 1775 aa6.65□□□□□ -1.34
SF3B1-208ENST00000470268 ST20-MTHFSA0A0A6YYL1 179 aa6.65□□□□□ -1.35
SF3B1-208ENST00000470268 LAMC1P11047 1609 aa6.64□□□□□ -1.35
SF3B1-208ENST00000470268 EIF4G2P78344 907 aaKnown RBP eCLIP6.64□□□□□ -1.35
SF3B1-208ENST00000470268 MYSM1Q5VVJ2 828 aa6.64□□□□□ -1.35
SF3B1-208ENST00000470268 SPSB2Q99619 263 aa6.64□□□□□ -1.35
SF3B1-208ENST00000470268 POLR1AO95602 1720 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-208ENST00000470268 LRPPRCP42704 1394 aaKnown RBP6.64□□□□□ -1.35
SF3B1-208ENST00000470268 ABCC11Q96J66 1382 aa6.64□□□□□ -1.35
SF3B1-208ENST00000470268 TNFRSF10AO00220 468 aa6.64□□□□□ -1.35
SF3B1-208ENST00000470268 TESK2Q96S53 571 aa6.64□□□□□ -1.35
SF3B1-208ENST00000470268 TBC1D2Q9BYX2 928 aa6.64□□□□□ -1.35
SF3B1-208ENST00000470268 AMOTL2Q9Y2J4 779 aa6.64□□□□□ -1.35
SF3B1-208ENST00000470268 ROBO2Q9HCK4 1378 aa6.63□□□□□ -1.35
SF3B1-208ENST00000470268 PLEKHH1Q9ULM0 1364 aa6.63□□□□□ -1.35
SF3B1-208ENST00000470268 DIP2AQ14689 1571 aa6.63□□□□□ -1.35
SF3B1-208ENST00000470268 C11orf95C9JLR9 678 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-208ENST00000470268 KCNA6P17658 529 aa6.63□□□□□ -1.35
SF3B1-208ENST00000470268 FLIIQ13045 1269 aa6.63□□□□□ -1.35
SF3B1-208ENST00000470268 WAPLQ7Z5K2 1190 aa6.63□□□□□ -1.35
SF3B1-208ENST00000470268 TECPR2O15040 1411 aa6.63□□□□□ -1.35
SF3B1-208ENST00000470268 DDX11L8A8MPP1 907 aa6.62□□□□□ -1.35
SF3B1-208ENST00000470268 CD2BP2O95400 341 aaKnown RBP6.62□□□□□ -1.35
SF3B1-208ENST00000470268 SAFB2Q14151 953 aaKnown RBP eCLIP6.62□□□□□ -1.35
SF3B1-208ENST00000470268 CRIPAKQ8N1N5 446 aa6.62□□□□□ -1.35
SF3B1-208ENST00000470268 PRAM1Q96QH2 718 aa6.62□□□□□ -1.35
SF3B1-208ENST00000470268 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.62□□□□□ -1.35
SF3B1-208ENST00000470268 AAASQ9NRG9 546 aa6.62□□□□□ -1.35
SF3B1-208ENST00000470268 PIK3R4Q99570 1358 aa6.62□□□□□ -1.35
SF3B1-208ENST00000470268 TREML4Q6UXN2 200 aa6.62□□□□□ -1.35
SF3B1-208ENST00000470268 SPIRE2Q8WWL2 714 aa6.62□□□□□ -1.35
SF3B1-208ENST00000470268 CLK2P49760 499 aaKnown RBP6.61□□□□□ -1.35
SF3B1-208ENST00000470268 TUSC1Q2TAM9 212 aa6.61□□□□□ -1.35
SF3B1-208ENST00000470268 PLA2G2CQ5R387 149 aa6.61□□□□□ -1.35
SF3B1-208ENST00000470268 PROCA1Q8NCQ7 364 aaPredicted RBP6.61□□□□□ -1.35
SF3B1-208ENST00000470268 POLR3EQ9NVU0 708 aa6.61□□□□□ -1.35
SF3B1-208ENST00000470268 PKD2L1Q9P0L9 805 aa6.61□□□□□ -1.35
SF3B1-208ENST00000470268 CENPJQ9HC77 1338 aaPredicted RBP6.61□□□□□ -1.35
SF3B1-208ENST00000470268 CPS1P31327 1500 aa6.61□□□□□ -1.35
SF3B1-208ENST00000470268 DLC1Q96QB1 1528 aa6.61□□□□□ -1.35
SF3B1-208ENST00000470268 POTECB2RU33 542 aa6.6□□□□□ -1.35
SF3B1-208ENST00000470268 GJA5P36382 358 aa6.6□□□□□ -1.35
SF3B1-208ENST00000470268 SIRT1Q96EB6 747 aa6.6□□□□□ -1.35
SF3B1-208ENST00000470268 ZNF335Q9H4Z2 1342 aaPredicted RBP6.6□□□□□ -1.35
SF3B1-208ENST00000470268 XRN1Q8IZH2 1706 aaKnown RBP6.6□□□□□ -1.35
SF3B1-208ENST00000470268 ARHGEF28Q8N1W1 1705 aaKnown RBP6.6□□□□□ -1.35
SF3B1-208ENST00000470268 EIF3AQ14152 1382 aaKnown RBP6.6□□□□□ -1.35
SF3B1-208ENST00000470268 FAM135BQ49AJ0 1406 aa6.6□□□□□ -1.35
SF3B1-208ENST00000470268 AVPP01185 164 aa6.6□□□□□ -1.35
SF3B1-208ENST00000470268 CTC1Q2NKJ3 1217 aa6.6□□□□□ -1.35
SF3B1-208ENST00000470268 NUTM1Q86Y26 1132 aa6.6□□□□□ -1.35
SF3B1-208ENST00000470268 SALL2Q9Y467 1007 aaPredicted RBP6.6□□□□□ -1.35
SF3B1-208ENST00000470268 DISP3Q9P2K9 1392 aa6.6□□□□□ -1.35
SF3B1-208ENST00000470268 PTCH1Q13635 1447 aa6.6□□□□□ -1.35
SF3B1-208ENST00000470268 SPTLC1O15269 473 aa6.59□□□□□ -1.35
SF3B1-208ENST00000470268 FMNL1O95466 1100 aaPredicted RBP6.59□□□□□ -1.35
SF3B1-208ENST00000470268 FOXC1Q12948 553 aa6.59□□□□□ -1.35
SF3B1-208ENST00000470268 MORN1Q5T089 497 aa6.59□□□□□ -1.35
SF3B1-208ENST00000470268 ZMYND15Q9H091 742 aa6.59□□□□□ -1.35
SF3B1-208ENST00000470268 POGKQ9P215 609 aa6.59□□□□□ -1.35
SF3B1-208ENST00000470268 WASHC2AQ641Q2 1341 aa6.59□□□□□ -1.35
SF3B1-208ENST00000470268 SBNO2Q9Y2G9 1366 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms