RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 APLP1P51693 650 aa12.79□□□□□ -0.36
CCDC171-204ENST00000470191 ARHGAP27Q6ZUM4 889 aa12.79□□□□□ -0.36
CCDC171-204ENST00000470191 TESK2Q96S53 571 aa12.79□□□□□ -0.36
CCDC171-204ENST00000470191 INSRP06213 1382 aa12.79□□□□□ -0.36
CCDC171-204ENST00000470191 LOC102724428A0A0B4J2F2 783 aa12.78□□□□□ -0.36
CCDC171-204ENST00000470191 A0A0G2JLW4 131 aa12.78□□□□□ -0.36
CCDC171-204ENST00000470191 MMP10P09238 476 aa12.78□□□□□ -0.36
CCDC171-204ENST00000470191 ATP6V1AP38606 617 aa12.78□□□□□ -0.36
CCDC171-204ENST00000470191 SIK1P57059 783 aa12.78□□□□□ -0.36
CCDC171-204ENST00000470191 ITPK1Q13572 414 aa12.78□□□□□ -0.36
CCDC171-204ENST00000470191 NMRK2Q9NPI5 230 aa12.78□□□□□ -0.36
CCDC171-204ENST00000470191 ASAP1Q9ULH1 1129 aa12.78□□□□□ -0.36
CCDC171-204ENST00000470191 EMILIN1Q9Y6C2 1016 aa12.78□□□□□ -0.36
CCDC171-204ENST00000470191 FLT4P35916 1363 aa12.78□□□□□ -0.36
CCDC171-204ENST00000470191 PXDNLA1KZ92 1463 aa12.78□□□□□ -0.36
CCDC171-204ENST00000470191 HTRA3P83110 453 aa12.77□□□□□ -0.37
CCDC171-204ENST00000470191 TMOD3Q9NYL9 352 aa12.77□□□□□ -0.37
CCDC171-204ENST00000470191 TOMM70O94826 608 aa12.76□□□□□ -0.37
CCDC171-204ENST00000470191 SPG7Q9UQ90 795 aa12.76□□□□□ -0.37
CCDC171-204ENST00000470191 BRCA1P38398 1863 aaKnown RBP12.76□□□□□ -0.37
CCDC171-204ENST00000470191 FCHSD2O94868 740 aa12.75□□□□□ -0.37
CCDC171-204ENST00000470191 DNAJC5GQ8N7S2 189 aa12.75□□□□□ -0.37
CCDC171-204ENST00000470191 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
CCDC171-204ENST00000470191 C16orf71Q8IYS4 520 aaPredicted RBP12.74□□□□□ -0.37
CCDC171-204ENST00000470191 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
CCDC171-204ENST00000470191 ARFGEF1Q9Y6D6 1849 aa12.74□□□□□ -0.37
CCDC171-204ENST00000470191 DPEP1P16444 411 aa12.73□□□□□ -0.37
CCDC171-204ENST00000470191 COL5A3P25940 1745 aaPredicted RBP12.73□□□□□ -0.37
CCDC171-204ENST00000470191 ANKRD26Q9UPS8 1709 aa12.72□□□□□ -0.37
CCDC171-204ENST00000470191 TGFB2P61812 414 aa12.72□□□□□ -0.37
CCDC171-204ENST00000470191 TMF1P82094 1093 aa12.72□□□□□ -0.37
CCDC171-204ENST00000470191 NKX1-1Q15270 411 aaPredicted RBP12.72□□□□□ -0.37
CCDC171-204ENST00000470191 TRAPPC3LQ5T215 181 aa12.72□□□□□ -0.37
CCDC171-204ENST00000470191 C9orf131Q5VYM1 1079 aa12.72□□□□□ -0.37
CCDC171-204ENST00000470191 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
CCDC171-204ENST00000470191 RTCBQ9Y3I0 505 aaKnown RBP12.72□□□□□ -0.37
CCDC171-204ENST00000470191 C10orf71Q711Q0 1435 aa12.71□□□□□ -0.37
CCDC171-204ENST00000470191 PHKG2P15735 406 aa12.71□□□□□ -0.37
CCDC171-204ENST00000470191 COL13A1Q5TAT6 717 aaPredicted RBP12.71□□□□□ -0.37
CCDC171-204ENST00000470191 EYA1Q99502 592 aa12.71□□□□□ -0.37
CCDC171-204ENST00000470191 CCDC87Q9NVE4 849 aa12.71□□□□□ -0.37
CCDC171-204ENST00000470191 PARP3Q9Y6F1 533 aa12.71□□□□□ -0.37
CCDC171-204ENST00000470191 KCPQ6ZWJ8 1503 aa12.71□□□□□ -0.38
CCDC171-204ENST00000470191 SBF1O95248 1867 aa12.7□□□□□ -0.38
CCDC171-204ENST00000470191 RFC4P35249 363 aa12.7□□□□□ -0.38
CCDC171-204ENST00000470191 IFNL2Q8IZJ0 200 aa12.7□□□□□ -0.38
CCDC171-204ENST00000470191 NLGN1Q8N2Q7 840 aa12.7□□□□□ -0.38
CCDC171-204ENST00000470191 ARHGEF1Q92888 912 aaKnown RBP12.7□□□□□ -0.38
CCDC171-204ENST00000470191 MYH14Q7Z406 1995 aaKnown RBP12.7□□□□□ -0.38
CCDC171-204ENST00000470191 KIF24Q5T7B8 1368 aa12.69□□□□□ -0.38
CCDC171-204ENST00000470191 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
CCDC171-204ENST00000470191 RBM46Q8TBY0 533 aaKnown RBP12.69□□□□□ -0.38
CCDC171-204ENST00000470191 SLC4A9Q96Q91 983 aa12.69□□□□□ -0.38
CCDC171-204ENST00000470191 CARD14Q9BXL6 1004 aa12.69□□□□□ -0.38
CCDC171-204ENST00000470191 RRAGCQ9HB90 399 aa12.69□□□□□ -0.38
CCDC171-204ENST00000470191 TNRC6CQ9HCJ0 1690 aaKnown RBP12.69□□□□□ -0.38
CCDC171-204ENST00000470191 CCDC88AQ3V6T2 1871 aa12.68□□□□□ -0.38
CCDC171-204ENST00000470191 GYS1P13807 737 aa12.68□□□□□ -0.38
CCDC171-204ENST00000470191 TNNT2P45379 298 aaPredicted RBP12.68□□□□□ -0.38
CCDC171-204ENST00000470191 KLRG1Q96E93 195 aa12.68□□□□□ -0.38
CCDC171-204ENST00000470191 RNF181Q9P0P0 153 aa12.68□□□□□ -0.38
CCDC171-204ENST00000470191 NCAPD2Q15021 1401 aa12.68□□□□□ -0.38
CCDC171-204ENST00000470191 SRP68Q9UHB9 627 aaKnown RBP12.67□□□□□ -0.38
CCDC171-204ENST00000470191 KDRP35968 1356 aa12.67□□□□□ -0.38
CCDC171-204ENST00000470191 ZNF831Q5JPB2 1677 aa12.67□□□□□ -0.38
CCDC171-204ENST00000470191 PTCD1O75127 700 aaKnown RBP12.66□□□□□ -0.38
CCDC171-204ENST00000470191 KCNA3P22001 575 aa12.66□□□□□ -0.38
CCDC171-204ENST00000470191 TNS4Q8IZW8 715 aa12.66□□□□□ -0.38
CCDC171-204ENST00000470191 POLR3GLQ9BT43 218 aa12.66□□□□□ -0.38
CCDC171-204ENST00000470191 PIM2Q9P1W9 311 aa12.66□□□□□ -0.38
CCDC171-204ENST00000470191 PLEKHG2Q9H7P9 1386 aa12.66□□□□□ -0.38
CCDC171-204ENST00000470191 WASHC2AQ641Q2 1341 aa12.65□□□□□ -0.38
CCDC171-204ENST00000470191 KDM2BQ8NHM5 1336 aa12.65□□□□□ -0.38
CCDC171-204ENST00000470191 RPS6KA4O75676 772 aa12.65□□□□□ -0.38
CCDC171-204ENST00000470191 CHRNA5P30532 468 aa12.65□□□□□ -0.38
CCDC171-204ENST00000470191 DALRD3Q5D0E6 543 aaKnown RBP12.65□□□□□ -0.38
CCDC171-204ENST00000470191 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCDC171-204ENST00000470191 CABP4P57796 275 aa12.64□□□□□ -0.39
CCDC171-204ENST00000470191 FSTL1Q12841 308 aa12.64□□□□□ -0.39
CCDC171-204ENST00000470191 EIF4A2Q14240 407 aaKnown RBP12.64□□□□□ -0.39
CCDC171-204ENST00000470191 RC3H1Q5TC82 1133 aaKnown RBP12.64□□□□□ -0.39
CCDC171-204ENST00000470191 TJP1Q07157 1748 aa12.64□□□□□ -0.39
CCDC171-204ENST00000470191 TIAM2Q8IVF5 1701 aa12.63□□□□□ -0.39
CCDC171-204ENST00000470191 AFDNP55196 1824 aaKnown RBP12.63□□□□□ -0.39
CCDC171-204ENST00000470191 RASSF7Q02833 373 aa12.63□□□□□ -0.39
CCDC171-204ENST00000470191 FKBP8Q14318 412 aa12.63□□□□□ -0.39
CCDC171-204ENST00000470191 CDCA8Q53HL2 280 aa12.63□□□□□ -0.39
CCDC171-204ENST00000470191 ZNF530Q6P9A1 599 aaPredicted RBP12.63□□□□□ -0.39
CCDC171-204ENST00000470191 JMYQ8N9B5 988 aa12.63□□□□□ -0.39
CCDC171-204ENST00000470191 DCAF5Q96JK2 942 aa12.63□□□□□ -0.39
CCDC171-204ENST00000470191 POLKQ9UBT6 870 aa12.63□□□□□ -0.39
CCDC171-204ENST00000470191 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
CCDC171-204ENST00000470191 ERVV-2B6SEH9 535 aa12.62□□□□□ -0.39
CCDC171-204ENST00000470191 ABCB7O75027 752 aa12.62□□□□□ -0.39
CCDC171-204ENST00000470191 CRKLP46109 303 aaKnown RBP12.62□□□□□ -0.39
CCDC171-204ENST00000470191 DDR1Q08345 913 aa12.62□□□□□ -0.39
CCDC171-204ENST00000470191 VIRMAQ69YN4 1812 aaKnown RBP12.62□□□□□ -0.39
CCDC171-204ENST00000470191 KDM6AO15550 1401 aaPredicted RBP12.61□□□□□ -0.39
CCDC171-204ENST00000470191 PLEKHO1Q53GL0 409 aaPredicted RBP12.6□□□□□ -0.39
CCDC171-204ENST00000470191 SMC1BQ8NDV3 1235 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms