RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 GTF2E1P29083 439 aaPredicted RBP11.73□□□□□ -0.53
COL11A1-208ENST00000470170 NCOA4Q13772 614 aa11.73□□□□□ -0.53
COL11A1-208ENST00000470170 GAS6Q14393 721 aa11.73□□□□□ -0.53
COL11A1-208ENST00000470170 C4orf17Q53FE4 359 aa11.73□□□□□ -0.53
COL11A1-208ENST00000470170 GNASQ5JWF2 1037 aa11.73□□□□□ -0.53
COL11A1-208ENST00000470170 DEPDC4Q8N2C3 294 aa11.73□□□□□ -0.53
COL11A1-208ENST00000470170 HDGFL1Q5TGJ6 251 aa11.72□□□□□ -0.53
COL11A1-208ENST00000470170 NFATC2IPQ8NCF5 419 aa11.72□□□□□ -0.53
COL11A1-208ENST00000470170 GPAMQ9HCL2 828 aa11.72□□□□□ -0.53
COL11A1-208ENST00000470170 PCDHGA11Q9Y5H2 935 aa11.72□□□□□ -0.53
COL11A1-208ENST00000470170 USP17L5A8MUK1 530 aa11.71□□□□□ -0.53
COL11A1-208ENST00000470170 TMEM229AB2RXF0 380 aa11.71□□□□□ -0.53
COL11A1-208ENST00000470170 F11P03951 625 aa11.71□□□□□ -0.53
COL11A1-208ENST00000470170 GTPBP3Q969Y2 492 aaKnown RBP11.71□□□□□ -0.53
COL11A1-208ENST00000470170 GMCL1Q96IK5 515 aa11.71□□□□□ -0.53
COL11A1-208ENST00000470170 SERTAD1Q9UHV2 236 aa11.71□□□□□ -0.53
COL11A1-208ENST00000470170 H7C1W4 665 aa11.7□□□□□ -0.54
COL11A1-208ENST00000470170 PROSER2Q86WR7 435 aaPredicted RBP11.7□□□□□ -0.54
COL11A1-208ENST00000470170 PPARGC1BQ86YN6 1023 aaKnown RBP11.7□□□□□ -0.54
COL11A1-208ENST00000470170 RHBDD1Q8TEB9 315 aa11.7□□□□□ -0.54
COL11A1-208ENST00000470170 UCN2Q96RP3 112 aa11.7□□□□□ -0.54
COL11A1-208ENST00000470170 NOD1Q9Y239 953 aa11.7□□□□□ -0.54
COL11A1-208ENST00000470170 GTF2IP78347 998 aa11.69□□□□□ -0.54
COL11A1-208ENST00000470170 FNBP4Q8N3X1 1017 aaPredicted RBP11.69□□□□□ -0.54
COL11A1-208ENST00000470170 NUCKS1Q9H1E3 243 aaKnown RBP11.69□□□□□ -0.54
COL11A1-208ENST00000470170 A0A1B0GTH6 734 aa11.68□□□□□ -0.54
COL11A1-208ENST00000470170 TBC1D9Q6ZT07 1266 aa11.68□□□□□ -0.54
COL11A1-208ENST00000470170 WHAMMQ8TF30 809 aa11.68□□□□□ -0.54
COL11A1-208ENST00000470170 LZTS3O60299 673 aaPredicted RBP11.67□□□□□ -0.54
COL11A1-208ENST00000470170 THBS1P07996 1170 aa11.67□□□□□ -0.54
COL11A1-208ENST00000470170 SLURP2P0DP57 97 aa11.67□□□□□ -0.54
COL11A1-208ENST00000470170 SMTNP53814 917 aa11.67□□□□□ -0.54
COL11A1-208ENST00000470170 ZNF385CQ66K41 422 aaPredicted RBP11.67□□□□□ -0.54
COL11A1-208ENST00000470170 FOXR1Q6PIV2 292 aa11.67□□□□□ -0.54
COL11A1-208ENST00000470170 ADAMTS2O95450 1211 aa11.66□□□□□ -0.54
COL11A1-208ENST00000470170 PLA2G4AP47712 749 aa11.66□□□□□ -0.54
COL11A1-208ENST00000470170 PSME1Q06323 249 aa11.66□□□□□ -0.54
COL11A1-208ENST00000470170 MSX1P28360 303 aa11.65□□□□□ -0.54
COL11A1-208ENST00000470170 SVOPQ8N4V2 548 aa11.65□□□□□ -0.54
COL11A1-208ENST00000470170 RUBCNLQ9H714 662 aa11.65□□□□□ -0.54
COL11A1-208ENST00000470170 USP17L3A6NCW0 530 aa11.64□□□□□ -0.55
COL11A1-208ENST00000470170 USP17L4A6NCW7 530 aa11.64□□□□□ -0.55
COL11A1-208ENST00000470170 SRSF11Q05519 484 aaKnown RBP11.64□□□□□ -0.55
COL11A1-208ENST00000470170 USP17L2Q6R6M4 530 aa11.64□□□□□ -0.55
COL11A1-208ENST00000470170 USP17L1Q7RTZ2 530 aa11.64□□□□□ -0.55
COL11A1-208ENST00000470170 GLMNQ92990 594 aa11.64□□□□□ -0.55
COL11A1-208ENST00000470170 TRERF1Q96PN7 1200 aa11.64□□□□□ -0.55
COL11A1-208ENST00000470170 SLC4A9Q96Q91 983 aa11.64□□□□□ -0.55
COL11A1-208ENST00000470170 MBIPQ9NS73 344 aa11.64□□□□□ -0.55
COL11A1-208ENST00000470170 USP3Q9Y6I4 520 aa11.64□□□□□ -0.55
COL11A1-208ENST00000470170 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.63□□□□□ -0.55
COL11A1-208ENST00000470170 A6NJY4 79 aa11.62□□□□□ -0.55
COL11A1-208ENST00000470170 ATP9BO43861 1147 aa11.62□□□□□ -0.55
COL11A1-208ENST00000470170 MTFR1Q15390 333 aa11.62□□□□□ -0.55
COL11A1-208ENST00000470170 PLEKHM2Q8IWE5 1019 aa11.62□□□□□ -0.55
COL11A1-208ENST00000470170 NIFKQ9BYG3 293 aaKnown RBP11.62□□□□□ -0.55
COL11A1-208ENST00000470170 ZNF358Q9NW07 568 aa11.62□□□□□ -0.55
COL11A1-208ENST00000470170 IQSEC3Q9UPP2 1182 aaPredicted RBP11.62□□□□□ -0.55
COL11A1-208ENST00000470170 CSB-PGBD3P0DP91 1061 aa11.61□□□□□ -0.55
COL11A1-208ENST00000470170 ZNF295-AS1Q8N0V1 137 aa11.61□□□□□ -0.55
COL11A1-208ENST00000470170 PGBD3Q8N328 593 aa11.61□□□□□ -0.55
COL11A1-208ENST00000470170 IGF1RP08069 1367 aa11.6□□□□□ -0.55
COL11A1-208ENST00000470170 LYPD4Q6UWN0 246 aa11.6□□□□□ -0.55
COL11A1-208ENST00000470170 KIAA1024Q9UPX6 916 aa11.6□□□□□ -0.55
COL11A1-208ENST00000470170 A6NJR5 290 aa11.59□□□□□ -0.55
COL11A1-208ENST00000470170 CDK2AP1O14519 115 aa11.59□□□□□ -0.55
COL11A1-208ENST00000470170 CLDN10P78369 228 aa11.59□□□□□ -0.55
COL11A1-208ENST00000470170 UBAP2LQ14157 1087 aaKnown RBP11.59□□□□□ -0.55
COL11A1-208ENST00000470170 TRIM50Q86XT4 487 aa11.59□□□□□ -0.55
COL11A1-208ENST00000470170 AIDAQ96BJ3 306 aa11.59□□□□□ -0.55
COL11A1-208ENST00000470170 ADAMTS8Q9UP79 889 aa11.59□□□□□ -0.55
COL11A1-208ENST00000470170 BACH1O14867 736 aa11.58□□□□□ -0.56
COL11A1-208ENST00000470170 MX2P20592 715 aa11.58□□□□□ -0.56
COL11A1-208ENST00000470170 ATP4AP20648 1035 aa11.58□□□□□ -0.56
COL11A1-208ENST00000470170 EFHC2Q5JST6 749 aa11.57□□□□□ -0.56
COL11A1-208ENST00000470170 TPCN2Q8NHX9 752 aa11.57□□□□□ -0.56
COL11A1-208ENST00000470170 CRISPLD1Q9H336 500 aa11.57□□□□□ -0.56
COL11A1-208ENST00000470170 CABP1Q9NZU7 370 aa11.57□□□□□ -0.56
COL11A1-208ENST00000470170 ZBTB7BO15156 539 aaPredicted RBP11.56□□□□□ -0.56
COL11A1-208ENST00000470170 ARHGEF15O94989 841 aa11.56□□□□□ -0.56
COL11A1-208ENST00000470170 CELA2BP08218 269 aaPredicted RBP11.56□□□□□ -0.56
COL11A1-208ENST00000470170 LBRQ14739 615 aaKnown RBP11.56□□□□□ -0.56
COL11A1-208ENST00000470170 SCHIP1Q9P0W5 487 aaPredicted RBP11.56□□□□□ -0.56
COL11A1-208ENST00000470170 TFIP11Q9UBB9 837 aaKnown RBP11.56□□□□□ -0.56
COL11A1-208ENST00000470170 MKRN1Q9UHC7 482 aaKnown RBP11.56□□□□□ -0.56
COL11A1-208ENST00000470170 PARP3Q9Y6F1 533 aa11.56□□□□□ -0.56
COL11A1-208ENST00000470170 ATP1A2P50993 1020 aa11.55□□□□□ -0.56
COL11A1-208ENST00000470170 CCDC102BQ68D86 513 aa11.55□□□□□ -0.56
COL11A1-208ENST00000470170 TNS4Q8IZW8 715 aa11.55□□□□□ -0.56
COL11A1-208ENST00000470170 OGFOD1Q8N543 542 aa11.55□□□□□ -0.56
COL11A1-208ENST00000470170 CALR3Q96L12 384 aaKnown RBP11.55□□□□□ -0.56
COL11A1-208ENST00000470170 CFHR5Q9BXR6 569 aa11.55□□□□□ -0.56
COL11A1-208ENST00000470170 DNAAF2Q9NVR5 837 aaKnown RBP11.55□□□□□ -0.56
COL11A1-208ENST00000470170 EPHA4P54764 986 aa11.54□□□□□ -0.56
COL11A1-208ENST00000470170 NBPF1Q3BBV0 1214 aa11.54□□□□□ -0.56
COL11A1-208ENST00000470170 TBCELQ5QJ74 424 aa11.54□□□□□ -0.56
COL11A1-208ENST00000470170 ABHD17AQ96GS6 310 aa11.54□□□□□ -0.56
COL11A1-208ENST00000470170 FOXK2Q01167 660 aa11.53□□□□□ -0.56
COL11A1-208ENST00000470170 MAP3K10Q02779 954 aa11.53□□□□□ -0.56
COL11A1-208ENST00000470170 C1orf216Q8TAB5 229 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms