RNA–Protein interactions for RNA: ENST00000470117.2

USP30-205, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-205ENST00000470117 KDM6AO15550 1401 aaPredicted RBP12.77□□□□□ -0.37
USP30-205ENST00000470117 SSFA2P28290 1259 aa12.76□□□□□ -0.37
USP30-205ENST00000470117 ITPK1Q13572 414 aa12.76□□□□□ -0.37
USP30-205ENST00000470117 AMOTQ4VCS5 1084 aa12.76□□□□□ -0.37
USP30-205ENST00000470117 C1orf141Q5JVX7 400 aa12.76□□□□□ -0.37
USP30-205ENST00000470117 SMIM5Q71RC9 77 aa12.76□□□□□ -0.37
USP30-205ENST00000470117 AMIGO3Q86WK7 504 aa12.76□□□□□ -0.37
USP30-205ENST00000470117 ZNF784Q8NCA9 323 aaPredicted RBP12.76□□□□□ -0.37
USP30-205ENST00000470117 DCAF5Q96JK2 942 aa12.76□□□□□ -0.37
USP30-205ENST00000470117 ATG3Q9NT62 314 aa12.76□□□□□ -0.37
USP30-205ENST00000470117 KDRP35968 1356 aa12.76□□□□□ -0.37
USP30-205ENST00000470117 SULT6B1Q6IMI4 303 aa12.75□□□□□ -0.37
USP30-205ENST00000470117 RBM42Q9BTD8 480 aaKnown RBP12.75□□□□□ -0.37
USP30-205ENST00000470117 ERVV-2B6SEH9 535 aa12.74□□□□□ -0.37
USP30-205ENST00000470117 CABP4P57796 275 aa12.74□□□□□ -0.37
USP30-205ENST00000470117 AMER1Q5JTC6 1135 aaPredicted RBP12.74□□□□□ -0.37
USP30-205ENST00000470117 MTHFSP49914 203 aa12.73□□□□□ -0.37
USP30-205ENST00000470117 COL5A3P25940 1745 aaPredicted RBP12.72□□□□□ -0.37
USP30-205ENST00000470117 YBX3P16989 372 aaKnown RBP eCLIP12.72□□□□□ -0.37
USP30-205ENST00000470117 IL13P35225 146 aa12.72□□□□□ -0.37
USP30-205ENST00000470117 CC2D1BQ5T0F9 858 aaKnown RBP12.72□□□□□ -0.37
USP30-205ENST00000470117 CD2APQ9Y5K6 639 aa12.72□□□□□ -0.37
USP30-205ENST00000470117 ZNF831Q5JPB2 1677 aa12.72□□□□□ -0.37
USP30-205ENST00000470117 GRIN3BO60391 1043 aa12.71□□□□□ -0.37
USP30-205ENST00000470117 CNGB1Q14028 1251 aaPredicted RBP12.71□□□□□ -0.37
USP30-205ENST00000470117 RTCBQ9Y3I0 505 aaKnown RBP12.71□□□□□ -0.37
USP30-205ENST00000470117 CNTNAP4Q9C0A0 1308 aa12.7□□□□□ -0.38
USP30-205ENST00000470117 PTCD1O75127 700 aaKnown RBP12.7□□□□□ -0.38
USP30-205ENST00000470117 HMOX1P09601 288 aa12.7□□□□□ -0.38
USP30-205ENST00000470117 SLC4A9Q96Q91 983 aa12.7□□□□□ -0.38
USP30-205ENST00000470117 SCN11AQ9UI33 1791 aa12.7□□□□□ -0.38
USP30-205ENST00000470117 TRAPPC3LQ5T215 181 aa12.69□□□□□ -0.38
USP30-205ENST00000470117 WWC3Q9ULE0 1092 aa12.69□□□□□ -0.38
USP30-205ENST00000470117 CICQ96RK0 1608 aaPredicted RBP12.69□□□□□ -0.38
USP30-205ENST00000470117 C4AP0C0L4 1744 aa12.68□□□□□ -0.38
USP30-205ENST00000470117 TJP1Q07157 1748 aa12.68□□□□□ -0.38
USP30-205ENST00000470117 DIAPH1O60610 1272 aaKnown RBP12.68□□□□□ -0.38
USP30-205ENST00000470117 MMP10P09238 476 aa12.68□□□□□ -0.38
USP30-205ENST00000470117 NFATC2IPQ8NCF5 419 aa12.68□□□□□ -0.38
USP30-205ENST00000470117 AKAP4Q5JQC9 854 aa12.67□□□□□ -0.38
USP30-205ENST00000470117 MRC1P22897 1456 aa12.66□□□□□ -0.38
USP30-205ENST00000470117 PER1O15534 1290 aaPredicted RBP12.66□□□□□ -0.38
USP30-205ENST00000470117 RPS6KA4O75676 772 aa12.66□□□□□ -0.38
USP30-205ENST00000470117 RFC4P35249 363 aa12.66□□□□□ -0.38
USP30-205ENST00000470117 RC3H1Q5TC82 1133 aaKnown RBP12.66□□□□□ -0.38
USP30-205ENST00000470117 VIRMAQ69YN4 1812 aaKnown RBP12.66□□□□□ -0.38
USP30-205ENST00000470117 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.38
USP30-205ENST00000470117 U2SURPO15042 1029 aaKnown RBP12.65□□□□□ -0.38
USP30-205ENST00000470117 GIGYF1O75420 1035 aaPredicted RBP12.65□□□□□ -0.38
USP30-205ENST00000470117 CRKLP46109 303 aaKnown RBP12.65□□□□□ -0.38
USP30-205ENST00000470117 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
USP30-205ENST00000470117 PPP4R3CPQ6ZMV5 832 aa12.65□□□□□ -0.38
USP30-205ENST00000470117 NLGN1Q8N2Q7 840 aa12.65□□□□□ -0.38
USP30-205ENST00000470117 ARHGEF1Q92888 912 aaKnown RBP12.65□□□□□ -0.38
USP30-205ENST00000470117 SLC52A2Q9HAB3 445 aa12.65□□□□□ -0.38
USP30-205ENST00000470117 NPC1L1Q9UHC9 1359 aa12.65□□□□□ -0.38
USP30-205ENST00000470117 MYH14Q7Z406 1995 aaKnown RBP12.65□□□□□ -0.38
USP30-205ENST00000470117 C10orf71Q711Q0 1435 aa12.64□□□□□ -0.39
USP30-205ENST00000470117 ATP10DQ9P241 1426 aa12.64□□□□□ -0.39
USP30-205ENST00000470117 KIF13BQ9NQT8 1826 aa12.64□□□□□ -0.39
USP30-205ENST00000470117 PXDNLA1KZ92 1463 aa12.64□□□□□ -0.39
USP30-205ENST00000470117 SENP3-EIF4A1A0A087X0R7 540 aa12.63□□□□□ -0.39
USP30-205ENST00000470117 RNMTO43148 476 aaKnown RBP12.63□□□□□ -0.39
USP30-205ENST00000470117 GYS1P13807 737 aa12.63□□□□□ -0.39
USP30-205ENST00000470117 MTHFSDQ2M296 383 aaKnown RBP12.63□□□□□ -0.39
USP30-205ENST00000470117 LGR6Q9HBX8 967 aa12.63□□□□□ -0.39
USP30-205ENST00000470117 CCDC87Q9NVE4 849 aa12.63□□□□□ -0.39
USP30-205ENST00000470117 PARP3Q9Y6F1 533 aa12.63□□□□□ -0.39
USP30-205ENST00000470117 ADAMTS7Q9UKP4 1686 aa12.63□□□□□ -0.39
USP30-205ENST00000470117 KIAA1551Q9HCM1 1747 aa12.62□□□□□ -0.39
USP30-205ENST00000470117 N4BP2Q86UW6 1770 aaPredicted RBP12.62□□□□□ -0.39
USP30-205ENST00000470117 C1QTNF8P60827 252 aa12.62□□□□□ -0.39
USP30-205ENST00000470117 SLC39A6Q13433 755 aa12.62□□□□□ -0.39
USP30-205ENST00000470117 DNAJC10Q8IXB1 793 aa12.62□□□□□ -0.39
USP30-205ENST00000470117 SRP68Q9UHB9 627 aaKnown RBP12.62□□□□□ -0.39
USP30-205ENST00000470117 KCPQ6ZWJ8 1503 aa12.62□□□□□ -0.39
USP30-205ENST00000470117 USP42Q9H9J4 1324 aaKnown RBP12.62□□□□□ -0.39
USP30-205ENST00000470117 UTRNP46939 3433 aa12.61□□□□□ -0.39
USP30-205ENST00000470117 ADCY9O60503 1353 aa12.6□□□□□ -0.39
USP30-205ENST00000470117 ZNF526Q8TF50 670 aaPredicted RBP12.6□□□□□ -0.39
USP30-205ENST00000470117 CFAP53Q96M91 514 aa12.6□□□□□ -0.39
USP30-205ENST00000470117 BCS1LQ9Y276 419 aa12.6□□□□□ -0.39
USP30-205ENST00000470117 UBR2Q8IWV8 1755 aa12.59□□□□□ -0.39
USP30-205ENST00000470117 A0A0G2JLW4 131 aa12.59□□□□□ -0.39
USP30-205ENST00000470117 TGFB2P61812 414 aa12.59□□□□□ -0.39
USP30-205ENST00000470117 FKBP8Q14318 412 aa12.59□□□□□ -0.39
USP30-205ENST00000470117 INTS5Q6P9B9 1019 aaKnown RBP12.59□□□□□ -0.39
USP30-205ENST00000470117 TTC5Q8N0Z6 440 aa12.59□□□□□ -0.39
USP30-205ENST00000470117 GAS2L2Q8NHY3 880 aa12.59□□□□□ -0.39
USP30-205ENST00000470117 GPBP1L1Q9HC44 474 aaPredicted RBP12.59□□□□□ -0.39
USP30-205ENST00000470117 COL15A1P39059 1388 aa12.58□□□□□ -0.4
USP30-205ENST00000470117 ZPR1O75312 459 aa12.58□□□□□ -0.4
USP30-205ENST00000470117 DPEP1P16444 411 aa12.58□□□□□ -0.4
USP30-205ENST00000470117 TEFQ10587 303 aa12.58□□□□□ -0.4
USP30-205ENST00000470117 SOS1Q07889 1333 aaPredicted RBP12.58□□□□□ -0.4
USP30-205ENST00000470117 GNAT3A8MTJ3 354 aa12.57□□□□□ -0.4
USP30-205ENST00000470117 CYP19A1P11511 503 aaPredicted RBP12.57□□□□□ -0.4
USP30-205ENST00000470117 PRKAR2BP31323 418 aa12.57□□□□□ -0.4
USP30-205ENST00000470117 DDR1Q08345 913 aa12.57□□□□□ -0.4
USP30-205ENST00000470117 USPL1Q5W0Q7 1092 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms